LOCUS       NM_028603               2229 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus zinc finger and BTB domain containing 8a (Zbtb8a),
            mRNA.
ACCESSION   NM_028603
VERSION     NM_028603.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Medeiros de Araujo,J.A., Barao,S., Mateos-White,I., Espinosa,A.,
            Costa,M.R., Gil-Sanz,C. and Muller,U.
  TITLE     ZBTB20 is crucial for the specification of a subset of callosal
            projection neurons and astrocytes in the mammalian neocortex
  JOURNAL   Development 148 (16) (2021)
   PUBMED   34351428
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   3  (bases 1 to 2229)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   4  (bases 1 to 2229)
  AUTHORS   Yoshikawa,T., Piao,Y., Zhong,J., Matoba,R., Carter,M.G., Wang,Y.,
            Goldberg,I. and Ko,M.S.
  TITLE     High-throughput screen for genes predominantly expressed in the ICM
            of mouse blastocysts by whole mount in situ hybridization
  JOURNAL   Gene Expr Patterns 6 (2), 213-224 (2006)
   PUBMED   16325481
REFERENCE   5  (bases 1 to 2229)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AL607123.22.
            
            On Oct 19, 2007 this sequence version replaced NM_028603.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK010736.1, BC017614.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-289               AL607123.22        126725-127013       c
            290-383             AL607123.22        118214-118307       c
            384-1186            AL607123.22        108883-109685       c
            1187-1356           AL607123.22        106690-106859       c
            1357-2229           AL607123.22        102617-103489       c
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 63.26 cM"
     gene            1..2229
                     /gene="Zbtb8a"
                     /gene_synonym="2410081M15Rik"
                     /note="zinc finger and BTB domain containing 8a"
                     /db_xref="GeneID:73680"
                     /db_xref="MGI:MGI:1920930"
     exon            1..289
                     /gene="Zbtb8a"
                     /gene_synonym="2410081M15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            290..383
                     /gene="Zbtb8a"
                     /gene_synonym="2410081M15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            384..1186
                     /gene="Zbtb8a"
                     /gene_synonym="2410081M15Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             385..1689
                     /gene="Zbtb8a"
                     /gene_synonym="2410081M15Rik"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein
                     8A"
                     /protein_id="NP_082879.1"
                     /db_xref="CCDS:CCDS18690.1"
                     /db_xref="GeneID:73680"
                     /db_xref="MGI:MGI:1920930"
                     /translation="MEISSHQSYLLQQLNEQRRQDVFCDCSILVEGKVFKAHRNVLFA
                     SSGYFKMLLSQNSRETSQPTTATFQTFSPDTFTVILDFVYSGKLSLTGQNVIEVMSAA
                     SFLQMTDVISVCKTFIKSSLDISEKEKDRYFSLSDKDTGSNGVERPPFYSSSWQEEGG
                     SPHSHVSPDPGKPWNKYGYPPASQRSPQRPLAKHEQRKEPSKKAKHVRLPQPSEVVHF
                     KPGKGEAQTDSGNHVSQSEEQVPVDAEVDPAPAGFQYSQGPDGIARSFPDDLTRLRFK
                     CPFCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICR
                     KCKRHVTDLTGQVVQEGTRRYRLCNECLADVGMESLPADLEAEQHRTAPADGDKDCRW
                     HLSEEENRSYVEIVEDGSADLVIQQVDDSEEEEEKEIKPNIR"
     exon            1187..1356
                     /gene="Zbtb8a"
                     /gene_synonym="2410081M15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1357..2229
                     /gene="Zbtb8a"
                     /gene_synonym="2410081M15Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2205..2210
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zbtb8a"
                     /gene_synonym="2410081M15Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2228
                     /gene="Zbtb8a"
                     /gene_synonym="2410081M15Rik"
                     /note="major polyA site"
ORIGIN      
        1 gcggagggtg cagtcgggcg tgggcacgga cagggggagt gggcgaagct gctggttggt
       61 gcctgaaatc tgtgcgttgc ccctttaatt gtgtcctcag ccctcgggcg tttctgtcca
      121 acgcccacgt cagcaaatac cttttgtttc tcccacgttg gggctacttg ttttagggcg
      181 caaagcctcg gcttcggaaa ggggctgctt cccctacccg gaaccgggaa tcgctccgca
      241 gcgcgcgcgc gcgcgagcga gcgagcgagc gagcggctag agccccgcga cactccgctg
      301 ttcgtgaact tgttgactta gagtccttcc tctttgccct tcagctgtcc tacggttccc
      361 agagcagcat cgtgcattgc cagaatggag atctcctctc accagtctta cctcctgcag
      421 caactgaatg agcagcgcag gcaagatgtg ttttgtgact gcagtattct cgtggaaggc
      481 aaggtcttca aagcgcatcg gaatgtcttg tttgcaagca gcggctactt taaaatgctg
      541 ctctctcaga actcaaggga gacgagtcag cccaccacag ccacgtttca gaccttctcc
      601 cccgatacct tcacagtcat cctggacttc gtatactccg gcaaactctc tcttacggga
      661 cagaatgtta tagaggtgat gtctgccgcg agcttccttc agatgactga cgtcattagt
      721 gtgtgtaaga ctttcattaa gtcttccttg gacattagcg agaaagagaa agatcgctac
      781 ttcagcctct cggataagga cactggctct aatggagtag agcgtccccc tttttatagt
      841 agcagctggc aggaagaagg cgggtctccc cactctcacg tgagcccaga ccctggaaag
      901 ccgtggaaca agtacggtta ccccccagcc tcccagagga gtcctcagcg accgttggcc
      961 aagcatgagc aaaggaagga gcccagtaaa aaggccaagc acgtgagact gccacaaccg
     1021 tctgaagtcg ttcattttaa gcccggcaaa ggagaagctc agaccgactc cggcaaccat
     1081 gtttcccagt ctgaagagca ggtaccggtg gatgccgaag tggatcctgc tcctgctggc
     1141 ttccagtaca gccaagggcc tgatggcata gccaggagct ttccagatga cctgaccagg
     1201 cttcggttca aatgcccatt ctgcacacat gtggtgaagc ggaaggcaga cctcaagcgc
     1261 cacttgcgct gccacaccgg agagaggccc tacccatgcc aggcttgtgg gaaacggttc
     1321 agcaggctag accatctgag tagccatttc cgaactattc accaggcatg caaactcatc
     1381 tgcaggaaat gcaaacgcca cgtgactgac ctcacggggc aagtggtgca ggaaggaacc
     1441 aggcgctaca gactatgtaa cgagtgtctt gctgatgtgg gcatggaaag tctccctgct
     1501 gacctggagg ctgagcaaca ccgcacagcc ccggccgatg gagacaagga ctgccggtgg
     1561 cacctgagcg aggaagagaa tagatcctat gtggagatcg tagaggacgg gtctgccgat
     1621 ctggtcatac agcaggttga cgacagcgag gaggaggaag agaaagaaat aaaacccaac
     1681 attaggtagc ctgaagtgtg acctgtcaga gctggcatgc ctgcaattta cacagacatg
     1741 ctgtgtctgt ctctccatgg gcagagcccg gtgaatgggt ttctcctact gacttagaag
     1801 caacctgatg taacttgcat gctttctgaa aaggccaccg tatccattct gaacgttgtt
     1861 gctgcactgg gaagaccttg cttgctgttg gcatgacaga tgatcaatta ccctttctgt
     1921 tattacagat accatttcct ttctttcttt ctttctttct ttctttcttt tttttgtttt
     1981 gttttgtttt gttttgtttt gttttttcaa gacagggttt ctctgtatgg ccctggctgt
     2041 cctggaactc actttgtaga ccaggctggc ctcaaattca gaaatccacc tgcctctgcc
     2101 tcccaagtcc tgggattaaa ggcgtgtgcc accacctcat ggcaccattt tctttaaata
     2161 ttggaaaaat ctatttagta aactttttgg actaaagtat tttaaataaa tgtatcacaa
     2221 aactttaag
//
