LOCUS       NM_146253               4535 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus zinc finger and BTB domain containing 6 (Zbtb6), mRNA.
ACCESSION   NM_146253
VERSION     NM_146253.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4535)
  AUTHORS   Medeiros de Araujo,J.A., Barao,S., Mateos-White,I., Espinosa,A.,
            Costa,M.R., Gil-Sanz,C. and Muller,U.
  TITLE     ZBTB20 is crucial for the specification of a subset of callosal
            projection neurons and astrocytes in the mammalian neocortex
  JOURNAL   Development 148 (16) (2021)
   PUBMED   34351428
REFERENCE   2  (bases 1 to 4535)
  AUTHORS   Gurdziel,K., Vogt,K.R., Walton,K.D., Schneider,G.K. and
            Gumucio,D.L.
  TITLE     Transcriptome of the inner circular smooth muscle of the developing
            mouse intestine: Evidence for regulation of visceral smooth muscle
            genes by the hedgehog target gene, cJun
  JOURNAL   Dev Dyn 245 (5), 614-626 (2016)
   PUBMED   26930384
REFERENCE   3  (bases 1 to 4535)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 4535)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   5  (bases 1 to 4535)
  AUTHORS   Bailey,P.J., Klos,J.M., Andersson,E., Karlen,M., Kallstrom,M.,
            Ponjavic,J., Muhr,J., Lenhard,B., Sandelin,A. and Ericson,J.
  TITLE     A global genomic transcriptional code associated with CNS-expressed
            genes
  JOURNAL   Exp Cell Res 312 (16), 3108-3119 (2006)
   PUBMED   16919269
REFERENCE   6  (bases 1 to 4535)
  AUTHORS   Piao,Y., Ko,N.T., Lim,M.K. and Ko,M.S.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CF168206.1, AK050827.1 and AL953890.7.
            
            On Apr 28, 2009 this sequence version replaced NM_146253.4.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK050827.1, SRR9219383.79338.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN02146468 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-379               CF168206.1         1-379
            380-1753            AK050827.1         325-1698
            1754-1754           AL953890.7         13615-13615         c
            1755-2935           AK050827.1         1699-2879
            2936-4535           AL953890.7         10834-12433         c
FEATURES             Location/Qualifiers
     source          1..4535
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 24.19 cM"
     gene            1..4535
                     /gene="Zbtb6"
                     /gene_synonym="A830092L04Rik; Zfp482; ZID"
                     /note="zinc finger and BTB domain containing 6"
                     /db_xref="GeneID:241322"
                     /db_xref="MGI:MGI:2442998"
     exon            1..111
                     /gene="Zbtb6"
                     /gene_synonym="A830092L04Rik; Zfp482; ZID"
                     /inference="alignment:Splign:2.1.0"
     exon            112..4535
                     /gene="Zbtb6"
                     /gene_synonym="A830092L04Rik; Zfp482; ZID"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..1392
                     /gene="Zbtb6"
                     /gene_synonym="A830092L04Rik; Zfp482; ZID"
                     /note="zinc finger protein 482"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein 6"
                     /protein_id="NP_666365.1"
                     /db_xref="CCDS:CCDS16000.1"
                     /db_xref="GeneID:241322"
                     /db_xref="MGI:MGI:2442998"
                     /translation="MAAESDVLHFQFEQQGDVVLQKMNLLRQQNLFCDVSIYINDTEF
                     QGHKVILAACSTFMRDQFLLTQSKHVRITILQSAEVGWKLLLSCYTGALEVKRKELLK
                     YLTAASYLQMVHIVEKCTEALSKYLEIDLSMKNNQHTDLCQSSDTDVKNEEENSDKDC
                     EIIEISEDSPVNLDFHVKEEESNALQSAAETLTSERMRMQSPELSAVDGGFKENEICI
                     LHVESISTDDVENGQFSQPCTSSKAGIYFPETQHSLINSTVENRVTEVPGNTNQGLFS
                     ENSDGSHGTVNEIQNLDENFSLRHQCPRCPRGFLHVENYLRHLKMHKLFLCLQCGKTF
                     TQKKNLNRHIRGHMGIRPFQCTVCLKTFTAKSTLQDHLNIHSGDRPYKCHCCDMDFKH
                     KSALKKHLTSVHGRSSGEKLSRPDLKRQNLL"
     regulatory      4510..4515
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zbtb6"
                     /gene_synonym="A830092L04Rik; Zfp482; ZID"
                     /note="hexamer: AATAAA"
     polyA_site      4532
                     /gene="Zbtb6"
                     /gene_synonym="A830092L04Rik; Zfp482; ZID"
                     /note="major polyA site"
ORIGIN      
        1 ccgcgaagaa taaagctggt tgactccgga agcgtttcct tccaggctaa gtccatcttc
       61 cggcctgggc tgccattgcc gcggaagcct caaagccagt tttgctagtc gatcgtgacc
      121 atggctgctg agtctgatgt tctacacttc cagtttgaac agcaaggaga tgtggtccta
      181 cagaaaatga atctcttgag acagcagaat ttattttgtg atgtatccat ttatattaac
      241 gatactgagt tccaggggca caaggtgatt ttggctgctt gctccacttt catgagagat
      301 cagtttttac tcacacagtc aaaacatgtc agaatcacca ttctacagag tgcagaagta
      361 ggctggaagt tgctgttgtc ctgctatact ggagcacttg aagtaaaaag aaaagagctt
      421 ttgaaatact tgactgctgc cagttacctt cagatggttc acattgtaga aaaatgcaca
      481 gaagctttgt caaagtattt ggaaattgac ctttctatga aaaataacca acacactgac
      541 ttgtgtcagt cttcagatac agatgttaag aatgaagaag aaaattctga taaagactgt
      601 gagatcattg aaatttcaga agatagtcct gtaaacctag atttccatgt caaagaggag
      661 gaaagcaatg cattacaatc tgctgcagag acactgacat cagagcggat gagaatgcag
      721 tcaccggagc tctctgcagt agatggtggc tttaaagaga atgaaatttg tatcctccat
      781 gtagaatcca ttagtacaga tgatgtagaa aatgggcagt tttcacagcc ttgtacctca
      841 tccaaagcag gcatatattt ccctgaaaca cagcattcat tgatcaattc tacagttgag
      901 aacagagtga cagaagttcc tggaaataca aatcaggggt tattttctga gaattctgat
      961 ggaagtcatg gtacggtaaa tgagatccag aatctggatg agaatttttc cttgaggcat
     1021 cagtgcccca ggtgtccaag gggatttctt catgtagaaa actatctgcg acaccttaag
     1081 atgcataaac tctttttgtg cttgcagtgt gggaaaacat ttacacagaa gaaaaatctt
     1141 aatcggcata ttcgaggaca catgggtata aggccctttc agtgtactgt gtgtttaaag
     1201 acctttactg ctaaaagcac acttcaggac cacttgaaca tacacagtgg ggatcggcca
     1261 tataaatgcc attgttgtga tatggatttc aaacacaaat ctgctctcaa aaagcactta
     1321 acctctgttc atggcaggag cagtggtgaa aaattatcta ggcctgatct caaacggcag
     1381 aatctactgt aatcaaatca atgacttttt tagacacatt ttataaaaat gcagcacatg
     1441 tagtgttgcc ccccacccaa tctgtatcat ttatttttgt tcttacatgt tattcattct
     1501 gaacttctaa taattccaaa gttggtggtg tgattaagtt tatgagattc tacattgtct
     1561 caaacattat gtattagtcc tctgttcagg agtaattgca gattctgatt tgtagttttt
     1621 agataagtga tttattgttg acctatatag aattttaagg aagtaagatg gcaagaaaat
     1681 agatttgaaa gcatagtgtt gcacatcgct attaatattg aaagcagata ggactagcag
     1741 tttttttttt ttttaattta accagtgttc ttgatttata accagaacac caaggtactg
     1801 tcttaaaact aaaggagcac aattcaaatt cacatggggc cagcaaaatg tctttagaaa
     1861 tacattactt aaatgtccaa aagaatatgt gattagaccc ttttcctgat tatatatatt
     1921 gtagcctccc tcagccttga agcaggctga tccagacttt gaccttgctg ccactaagaa
     1981 ggagaggcta gagccttctg accttgatgg ctctatttgc tcttctccaa gactgcttcc
     2041 tgctgaaagg tctttgagac cgtccgacct gtagatcacc tactggctgg ctccaggcac
     2101 caagaatggg ctggcaggga atgggcctac cctctttata agcatggact ctcagtaaac
     2161 ttcagaggct ttgaacagaa aggtttgtct tggcctagtt cttttcttgc ctctggtctc
     2221 tttcagcccc agcacgcctt tcaggggaac ccagttctcg ttcagcaggc ggctacaata
     2281 tataacatgg ttggattaag aactctggcc aatgcaagta ttttcttaaa ttgacaattt
     2341 tcttagattg gcaagttact tttcttaaat agtccacttt catcaaagac attgttacac
     2401 tgtttactta gggtttcttt tggtgtttgt tttggtttac atgcactaaa attgacctct
     2461 gtggaattac atttctacga atttagtaca tatctaattg tctgcaattg ggacacagaa
     2521 tagttccacc agcttccaaa attcccttat gctgctcttt tgtagtccac cctttctaac
     2581 tctaaattct actaagagtt cttcattaat ataatttgtt ctaatctgag gtgataataa
     2641 aactggaatc ttatgttccc ttttgatatt ttttaacccc acatagtgcc attgagctcg
     2701 atttatattt gtgaatattt gtgtatatta tcaagtcatt aagttttcat atctcttatt
     2761 ttacttttgg catgatttgt gcagctcggg ctggcctcga gtttgccttg attcttgagc
     2821 actgagatta tgtctttgtt ttgaattgcc tctgtatgca ttttcttttc gagcagtcat
     2881 caggtgaata gttttaattt ttaaaagcta ctagaattag ttataatgtc tcattatatg
     2941 tatgaatatc tgtacattca atttttttgt ccttacaatg aagagcaaaa tttactgcca
     3001 ggcaaatcac cttctctgac cacaagaagt cactttcaaa ctgtcctatt tctctacata
     3061 actcagctct gtgtagagtt tctacagtat ttaagtttta ttgactcttt tctatatttt
     3121 aacatgtaaa atactttgta ctatataaga ggtttgtgaa aattatgtgg tattatatat
     3181 aatttttgtg atacttttgt gggaataatg ctctacattg aatttttaac tctgggagag
     3241 actttaaaga atataagtct caaagtcact tcataaacca agtcactaat taatcacatt
     3301 aagcaggtca cctgtccttc aacattcttt ttgttttttt ttgttttttt ttgttttttt
     3361 tttgttttcg agacagggtt tctctgtata gccctggctg tcctggaact cactctgtag
     3421 accaggctgg cctcgaactc agaaatccgc ctgcctctgt cccctgagtg ctgggattaa
     3481 aggtgtgtgc caccatgccc cgcaactttt cttaatttta tataaaataa ctttgatctt
     3541 cctaatttgt agagttattt ctaagtaaat ttctacaaat ttatattctt catgtgaaca
     3601 gaggagacat gtcttttcaa acactgctat ttgctatttg agtactctct tggaaacaga
     3661 acttttttaa aagtaaacat tttgttccac tttataatgg attggttcag tggctaattt
     3721 cctttcgcac ataacttaag aatggccagt tatagttgtg agcgtattcc cctcagagaa
     3781 acagtttgtg actgaagtgc ttctcttatt tttgcttcct gaattgattt ttggaaggga
     3841 gggttaggga tgggtggagt aaacagtgag ttcttggggg aagtggtatg tactatactg
     3901 ggtgttcaga acattttgaa tgtgttttaa gttttattcg tgccttgtaa gattgttgta
     3961 aaatcaaaat ttgtgagcac tttgaaagtt ttgcttgtgg ggagggtgtt ttataatgtg
     4021 gttgttattt atattattta tttccattac gtggacaaat tgatcctagg agctgggcaa
     4081 agtgcacatg cctataattc tagcacttgg gagatagagg caagagattc agttcagggc
     4141 cagcctttct tatatatagc taagttttag gccagcctca tatacaggag acattgtttt
     4201 aaggaaaaca aaataaaaaa gtaaaacaaa acaaaaacat tcctgggaga gcatccgctt
     4261 gcatgacatt tctgaaaaat tcagcaaagt agaatctgta aagatatgaa ggtatgacaa
     4321 agtaaagtgt agcatttatt cattttaaat acttttagct gtttgtttat gtcagaaaaa
     4381 gcagtatatt tgggttgaac ctagtatgta ctgcatttaa atgtgtaaaa gatcttgaaa
     4441 aggttgttac tttgttgtag agaaaatcct ttcctctttt cattggatgt aattatgttt
     4501 gtatgaaaca ataaaccgga ggtgggaatg gagaa
//
