LOCUS       NM_001025594            4998 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus zinc finger and BTB domain containing 43 (Zbtb43),
            transcript variant 2, mRNA.
ACCESSION   NM_001025594
VERSION     NM_001025594.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4998)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 4998)
  AUTHORS   Meng,Y., Wang,G., He,H., Lau,K.H., Hurt,A., Bixler,B.J., Parham,A.,
            Jin,S.G., Xu,X., Vasquez,K.M., Pfeifer,G.P. and Szabo,P.E.
  TITLE     Z-DNA is remodelled by ZBTB43 in prospermatogonia to safeguard the
            germline genome and epigenome
  JOURNAL   Nat Cell Biol 24 (7), 1141-1153 (2022)
   PUBMED   35787683
REFERENCE   3  (bases 1 to 4998)
  AUTHORS   Medeiros de Araujo,J.A., Barao,S., Mateos-White,I., Espinosa,A.,
            Costa,M.R., Gil-Sanz,C. and Muller,U.
  TITLE     ZBTB20 is crucial for the specification of a subset of callosal
            projection neurons and astrocytes in the mammalian neocortex
  JOURNAL   Development 148 (16) (2021)
   PUBMED   34351428
REFERENCE   4  (bases 1 to 4998)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   5  (bases 1 to 4998)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 4998)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   7  (bases 1 to 4998)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   8  (bases 1 to 4998)
  AUTHORS   Evsikov,A.V., Graber,J.H., Brockman,J.M., Hampl,A., Holbrook,A.E.,
            Singh,P., Eppig,J.J., Solter,D. and Knowles,B.B.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
REFERENCE   9  (bases 1 to 4998)
  AUTHORS   Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Aizawa,H., Yuasa,S.,
            Nakajima,D., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: II. The complete nucleotide sequences of 400 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (1), 35-48 (2003)
   PUBMED   12693553
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC043117.1 and AL929212.8.
            
            Transcript Variant: This variant (2) differs in the 5' UTR and
            coding sequence compared to variant 3. The resulting isoform (b) is
            shorter at the N-terminus compared to isoform a. Variants 2, 4, and
            5 all encode the same isoform (b).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC043117.1, AK122277.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849376,
                                           SAMN00849383 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2065              BC043117.1         1-2065
            2066-4998           AL929212.8         6354-9286           c
FEATURES             Location/Qualifiers
     source          1..4998
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 22.46 cM"
     gene            1..4998
                     /gene="Zbtb43"
                     /gene_synonym="1700010E06Rik; mKIAA0414; Zfp297b"
                     /note="zinc finger and BTB domain containing 43"
                     /db_xref="GeneID:71834"
                     /db_xref="MGI:MGI:1919084"
     exon            1..100
                     /gene="Zbtb43"
                     /gene_synonym="1700010E06Rik; mKIAA0414; Zfp297b"
                     /inference="alignment:Splign:2.1.0"
     exon            101..161
                     /gene="Zbtb43"
                     /gene_synonym="1700010E06Rik; mKIAA0414; Zfp297b"
                     /inference="alignment:Splign:2.1.0"
     exon            162..4998
                     /gene="Zbtb43"
                     /gene_synonym="1700010E06Rik; mKIAA0414; Zfp297b"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4969..4974
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zbtb43"
                     /gene_synonym="1700010E06Rik; mKIAA0414; Zfp297b"
                     /note="hexamer: AATAAA"
     polyA_site      4994
                     /gene="Zbtb43"
                     /gene_synonym="1700010E06Rik; mKIAA0414; Zfp297b"
                     /note="major polyA site"
ORIGIN      
        1 ggcggaagtt gtccccgcgg tggcggcgga gaataaggcc ttggtacggc aacggggacg
       61 ctccggtagg ctggagctac gggcgcggag ccgtctgaag actgctcttt gatggccatg
      121 gcataaggag cattatcctg ggaatacagc tttgctcttg gcactaaaca agattggtga
      181 tgaaatggag cctggaacga actcttttca agtagagttt ccagattttt ccagcaccat
      241 tctgcagaaa ctaaaccagc agcgccagca aggacagtta tgtgacgtct ccattgttgt
      301 ccaaggccac attttccagg cgcacaaagc tgttcttgcc gccagttctc cctacttttg
      361 tgaccaagta ctcctgaaaa acagtaggag aattgttttg cccgatgtaa tgaacccaag
      421 agtgtttgag aacattcttt tatttagcta cacaggacgc cttgtcatgc ctgctccaga
      481 aattgttagt tacttaacag cggccagctt cctccagatg tggcacgtgg tggacaagtg
      541 caccgaggtt ctggagggaa accccacggt cctgtgtcag aagctgaacc acggcagtga
      601 ccaccagtct cccagtagca gtaactacaa cggcctggtg gagagctttg agctgggctc
      661 tgggggccac actgatttcc ccaaagccca ggaactgaga gacggagaga atgaagagga
      721 gagcaccaaa gacgagctgt catctcaggt caccgagcac gagtatttgc ccagtaactc
      781 gtctactgag cacgaccgac tgagcacaga gatggccagc caggacgggg aggaggggac
      841 caatgacagt actgagttcc actacacccg gcctctgtat agcaagccca gcatcatggc
      901 tcataggcgc tggatccacg tgaagcctga gcgcttggaa caggcatggg atggcatgga
      961 tgttcacgca gcctacgatg agcaccaggt cactgaatcc gtcaatacca tgcagacgga
     1021 tcactctgcc cagccttcgg gagcagagga ggagttccaa attgtggaaa agaaagtgga
     1081 agtagagttt gatgagcaag cagaaggcag cagctatgat gaacaggtgg acttctatgg
     1141 ctcctccatg gaagagttct ctggagaaaa gttgggtggg aatctaattg gacacaaaca
     1201 ggaggctgcc cttgccgcag gctacagtga gaatattgaa atggcgatgg ggataaaaga
     1261 agaggcgtcc cacttaggat tctcggccac cgacaagctg tatccttgtc agtgtgggaa
     1321 aagtttcacg cacaaaagtc agcgagatcg acacatgagc atgcacctcg gtcttcgccc
     1381 gtatggctgt agtgtctgtg gtaagaaatt caaaatgaag caccatctcg tgggccacat
     1441 gaaaattcat acaggcataa agccctacga gtgtaatatc tgtgcaaaga gatttatgtg
     1501 gagggacagt ttccacaggc atgtgacttc ttgtaccaag tcctatgaag ctgcaaaggc
     1561 tgagcagaat acaactgagg ctaactaaaa atagggtctg gcccttgagt ggcatgcata
     1621 aaaataaact atggtaatta atgcaaatct gggcacagat gatgcgtgcc acttgctatt
     1681 atgagagagg cttaaaaaaa aaaaagatat ttctgaaaga ccagctctaa gtaggccaat
     1741 taaaagattt aatttctcaa atctgtatgt tctcatcctg gcctaaatgg atgatggggc
     1801 taagttcacc cagtgcccag ctggcaagac agctcttcca gtcagcagtg gctaaggcag
     1861 gggactgggt ggcagaatct aacccagtcc tgcccaggtg gcagcggccg gctgtcactg
     1921 ttgtcctgag gtcttgttgc attttgttct ctcctggtag ctacagggct tctgggcttt
     1981 gctttggtag ctgcatctct ggatgctgct cccctcaagg ctacagcaag gactcctggg
     2041 ctgagctgtg agcagagctc ttttttgtct actttcatac cgttctaaag gttctagcta
     2101 aagccctggt gatgtcaggc ggagcttcag agtccgaagc aggagacact gtcaccatgc
     2161 tgcagattct ggataaggca cgattttatg tttaattcta cttggtcaag tctatgggtg
     2221 ccagagatag gtgtttctag ttggtgtgtt gtcctacgct tccctcattt aatggcaggg
     2281 gaagaccagt ttgcagtgtc acacgacagt gctggctagc agtgacctgt ggctcctctg
     2341 ccttagatca tggtgctacc caaaagggca gccagggacc acagctcctg agactaagcc
     2401 agaatggatg gctgagggtt ctccaggaac aagacgttcc cagactcagt aagtgagagg
     2461 cagcaactta tacacagaag gcttgagaaa ggaatcctaa aaacactggt gtggacagtg
     2521 ctcagttaga gggtgcgctg agcaatattg tcagctcttt gtggcttcag agggggaagg
     2581 agccctacat taagcaacgt catctacaga ctcatgttcc ccagtcacag agaaagctgc
     2641 atttacaagt cccagtagtt tatgcataca cacaccatac atacatacat acatacatac
     2701 atacaccatc tctgcaagga caaggctgtc cttgaggtct gttctgcatg gtcagatgtt
     2761 ttaggttggg aagaaagctt aagctcagaa agctttaagc ctgtgacggg cctgaggctc
     2821 ctgctgggta ggggtctggt gtgctttgcg ttactggcca aagcagctta gggaggaaaa
     2881 ggtttatgtc agctcacacc accgtcagtg aggaaactcc aggcaggaac ttgaacattg
     2941 acagtcaaga ctgctggcca gacacgccca caggccactc ccacagcaga gactccctct
     3001 ggctctaggc tgtgtcagac agagctagac agtagggcag gggtttgctc ctatattatc
     3061 atctgtttca tttttaaagt ttggctttct ctaacatgac agacatttct ggcaaaagcc
     3121 tctggtcttc aggccctgac acaaaggatg tacctttgac ctttgtctgg aaagaggaaa
     3181 gaaaaaagaa aatatggact cgccagtaaa tgtttgtgat caagattaca aaacagggat
     3241 ctatttacaa acactgtatc agtcttggca tataaaagca ctttgtatta aacctttatt
     3301 ataagtatag atgtagggtt gtttttgttt taaaatctag aaactaggta ttacctccta
     3361 gtggtttgct acattcagat cttccagtgt ctgccagtca gcagccctgt ccctgtccct
     3421 gtccctgaga agtgaataca gatgtacagt cacactcaca cgcctcctac ccttcacgta
     3481 ttagaggcca gtgggtttcc ggatgaccct gagcttggtg aggatgaagt gcttttggct
     3541 tcttagtatt tctacactga ggcagttaag ctgttctgtt gtcagaagca accctcatgt
     3601 tcatgccttc tgcctgctgg gcagatccat gtgctgtctc ccattgaagt ctattcatat
     3661 aagagctgag acctttgcag ggaagagttt ggggggtaaa acaagcctgg tccttgggtt
     3721 gtactgagtc agtaaccttt gtcaaaagct gacaaagctt tcgttcagtt ggaatgtggc
     3781 agaccctgtg agaaggtggg gtgtccacgg tccagaaggc ttctgacctg cctttcccag
     3841 tagagagcct ttctggcagc ctgccctgtt agagtaccag cctctcccct caccactgcc
     3901 ttaggaaata aatcctcacc cttccagaag agcctgacta gtctagtcgt gggcagcact
     3961 gcccaccagt acaatgtatg tctccactct gagccttggc tggttgtctc cagtccgagt
     4021 acaaagggct tcaaggcccc actggttgcg tttcctaatc tgcaggcaca tgccttcaat
     4081 ctgggatgca cacgtcacag gagctcctct tgtgctgtgg tttaccttgt gttctcccga
     4141 gccctggccc aggacctggg atttctgctc tcaccacctc cgcctacatc ttcagagcct
     4201 gccctaaagg ctcccttcca ttgcaggaga gaggagtttc ctgaaccact ctgaccctgg
     4261 gccgcctttt agctgttggg aaagctacgt gctaccgtgg gtgatgtacc ctgagaagtt
     4321 gaacattctg gaaaaggtgt actggggctg agtccccaag gtcggggtgg agctttgctg
     4381 tgcccacaga tgtggttgct ccctaaattc tcagatactt tggaaatgct gagggccata
     4441 ggccaggcta tccttggcct cctgggaact aggctgcttt gaccgtaaaa ctaactttat
     4501 ccagagaatc ctgggttgct ttgggttttg tttttctttt tgttctctct ctgctattta
     4561 catatttaaa ggtactagtt tgcaaacctc tactgatagt gccctgtggg aagatgctgg
     4621 aacacctttt gcaaatgtga tttttttttt cattttaaat gttgcttgaa gcctgtgtca
     4681 tgtcagttgc tgctgcctcc tttcctttta tgagggtccc aatgtttctt ccagaaagtt
     4741 attttattta tgcaagtcag gtgactctta gaccacagaa ccatgggatg ataagcagat
     4801 tgtcattagg tgcatatcat ggatatttgt gaaccacctg tgttttagaa gttaaatagt
     4861 tctttctaga attgctgtct tcagtgtaca gcgtggtttt aattgaatgt taccgtttaa
     4921 tattttcttc ttatagaaga gaccatgtcc ttttgtatga caagttttaa taaatgttac
     4981 ctgtccattt tgtacaaa
//
