LOCUS       NM_198035               5968 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus zinc finger and BTB domain containing 39 (Zbtb39),
            mRNA.
ACCESSION   NM_198035 XM_137403
VERSION     NM_198035.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5968)
  AUTHORS   Medeiros de Araujo JA, Barao S, Mateos-White I, Espinosa A, Costa
            MR, Gil-Sanz C and Muller U.
  TITLE     ZBTB20 is crucial for the specification of a subset of callosal
            projection neurons and astrocytes in the mammalian neocortex
  JOURNAL   Development 148 (16) (2021)
   PUBMED   34351428
REFERENCE   2  (bases 1 to 5968)
  AUTHORS   Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S,
            Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N,
            Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y,
            Okado H, Hashimoto M and Asahara H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   3  (bases 1 to 5968)
  AUTHORS   Okazaki N, F-Kikuno R, Ohara R, Inamoto S, Koseki H, Hiraoka S,
            Saga Y, Seino S, Nishimura M, Kaisho T, Hoshino K, Kitamura H,
            Nagase T, Ohara O and Koga H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: IV. The complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 11 (3), 205-218 (2004)
   PUBMED   15368895
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC160970.7 and AC129576.11.
            
            On Jan 25, 2019 this sequence version replaced NM_198035.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC058661.1, AK155700.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-133               AC160970.7         200570-200702
            134-2862            AC160970.7         202555-205283
            2863-5968           AC129576.11        101454-104559
FEATURES             Location/Qualifiers
     source          1..5968
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 74.98 cM"
     gene            1..5968
                     /gene="Zbtb39"
                     /gene_synonym="7030401O21Rik; mKIAA0352"
                     /note="zinc finger and BTB domain containing 39"
                     /db_xref="GeneID:320080"
                     /db_xref="MGI:MGI:2443316"
     exon            1..133
                     /gene="Zbtb39"
                     /gene_synonym="7030401O21Rik; mKIAA0352"
                     /inference="alignment:Splign:2.1.0"
     exon            134..5968
                     /gene="Zbtb39"
                     /gene_synonym="7030401O21Rik; mKIAA0352"
                     /inference="alignment:Splign:2.1.0"
     CDS             178..2316
                     /gene="Zbtb39"
                     /gene_synonym="7030401O21Rik; mKIAA0352"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein
                     39"
                     /protein_id="NP_932152.1"
                     /db_xref="CCDS:CCDS24249.1"
                     /db_xref="GeneID:320080"
                     /db_xref="MGI:MGI:2443316"
                     /translation="MGMRIKLQSSNHPNNLLKELNKCRLSETMCDVTIVVGSRSFPAH
                     KAVLACAAGYFQNLFLNTGLDAARTYVVDFITPANFEKILSFVYTSELFTDLINVGVI
                     YEVAERLGMEDLLRACHSTFPDLESTAIAKSLTSTSDSQCVTLSCPSVDPTHPLGESR
                     GSGEHFGPDRNYVLPTDAGGSYKEEERSVSGDTNHGLPLPQLPLPPKSEDHDTPVPFT
                     SVPSVATPPPVLGMVSTGIQTSTSSCQPYKVQSNGDFSKSTFFASDNAVDITTQTNSC
                     LSNSDHSRDPSFGQMDELQLDDVGDEDLQFEDPAEDIGTAEEVIELSDDSEDDLAFGD
                     SDNRENKAMPCQVCKKVLEPNIQLIRQHARDHVDLLTGNCKVCETHFQDRNSRVTHVL
                     SHIGIFLFSCDMCETKFFTQWQLTLHRRDGIFDNNVIVHPSEPLSGKLGLFPGAASPE
                     LKCAVCGKALAKDFHVVRCHILEHVNLKGQACSICDQRHLNLCSLMWHMLSHLGISVF
                     SCSVCASSFVDWHLLEKHMVVHQGLEDVLFRCHLCSQSFRSEAAYRYHVSQHKCSSGL
                     DARPALGLPHLALQKRKLPAEEFLSEELALQGQPGNSKYSCKVCGKRFAHTSEFNYHR
                     RIHTGEKPYQCKVCHKFFRGRSTIKCHLKTHSGALMYRCTVCGHYSSTLNLMSKHVGV
                     HKGSLPPDFTIEQTFMYIIHSKEAEKNPDS"
ORIGIN      
        1 gcggcgagcg gctcggcgga tggagagtct ggccgcggcc ggcggcgccg cctcctcgtc
       61 gggccgggca cggcgggccg gggcctttgt gtgaggcggt ggcggcgatg gtgctcggac
      121 cccgcggagc cggattgatc ttgctgatac agaggcatct tcctaggagc tgctaagatg
      181 ggcatgagga tcaaactgca aagcagcaac caccccaaca acctgctgaa ggaactcaac
      241 aagtgccggc tgtcagagac catgtgcgat gtcaccatcg tggtggggag ccgctctttc
      301 cccgcccaca aagccgtgct ggcgtgcgca gctggctact tccagaacct cttcttaaac
      361 actgggctag atgctgcgcg gacctacgtg gtggacttca ttacccctgc caactttgag
      421 aagatcctga gttttgtata tacatcagag ctcttcacag acctgatcaa cgttggggtc
      481 atctatgagg tcgctgaacg cctgggtatg gaggatctgc tgcgagcctg ccattccact
      541 ttcccagacc tagagagcac tgcaatagcc aagtccttga ccagcaccag cgacagccag
      601 tgtgtcactc tcagttgtcc ctcagtagat cccacccacc cccttggaga gtcccggggg
      661 agtggggaac acttcggtcc tgatagaaac tatgtgctgc ctactgatgc aggaggaagc
      721 tacaaagagg aagagcggag tgtctcgggt gacactaatc atggcttgcc cctgccacag
      781 ctgccactgc caccaaagtc ggaagaccac gacacccctg ttcccttcac gtctgttcct
      841 agtgtggcaa ccccaccacc agtcctaggc atggtcagca caggcatcca gaccagcacg
      901 agttcttgcc agccatacaa agttcaaagc aacggagact tcagtaaaag caccttcttt
      961 gcctctgata acgcggtaga cattacaacc cagaccaact cctgtttgag caatagcgac
     1021 cactccagag atccaagctt tgggcagatg gatgagctcc agctggacga cgtgggggac
     1081 gaggacctgc agtttgagga cccggccgaa gacatcggga ccgcagagga ggtgattgag
     1141 ttgagcgacg acagcgagga cgacctggct ttcggtgaca gtgacaaccg ggagaataag
     1201 gccatgccct gccaggtgtg caagaaagtt ctagagccca acattcagct gatacggcag
     1261 catgcgcggg accacgtaga cttgctcaca ggcaactgca aggtctgtga gacccacttc
     1321 caggaccgaa actcccgggt gacccatgtc ctgtctcaca tcggcatctt cctgttttcc
     1381 tgcgatatgt gtgagacaaa gttcttcacc cagtggcagc tgaccctgca ccggcgggat
     1441 gggatatttg ataacaacgt cattgtccac cccagtgaac ccctgtctgg gaaactgggt
     1501 ctctttccag gggcagcctc cccggagttg aaatgtgctg tctgtgggaa agcattggcc
     1561 aaagatttcc acgtggtccg ttgccacatc ctcgagcacg tgaacttgaa gggccaggcc
     1621 tgcagcatct gcgatcagcg ccacctcaac ctctgcagcc tcatgtggca catgctctcc
     1681 catctgggca tctcagtctt ctcctgttcg gtctgtgcca gcagctttgt ggactggcac
     1741 cttctagaga aacacatggt tgttcaccag ggcctggagg atgtcctctt ccgttgccac
     1801 ttgtgcagcc agagcttccg gtcagaggca gcctaccgct accacgtcag ccagcacaag
     1861 tgcagcagcg gcctggacgc gcggcctgct ctgggactac cacacctagc cctccagaag
     1921 cggaagctgc ccgccgagga gtttctgagc gaagagctgg ctctgcaggg ccagcctggg
     1981 aatagtaagt acagttgtaa ggtctgtggc aaaaggtttg cccacacaag cgagttcaac
     2041 taccaccggc ggatccacac aggcgagaaa ccttatcagt gcaaggtttg tcacaaattc
     2101 ttccgaggtc gctcgaccat caagtgccac ctcaagacgc attcaggggc gctcatgtac
     2161 cgctgcacag tctgcggcca ctacagttcc acccttaacc tcatgagtaa acacgtcggg
     2221 gtgcacaaag gcagccttcc ccctgacttc accatcgagc agaccttcat gtacattata
     2281 cattccaaag aggctgagaa gaacccggac agctgactgg gtcccagcag agtcagaggg
     2341 agctcccagg tggcagccgg gatagtgact ttgtaaaggc cgttggtcct ccccccgctg
     2401 acgctacagc ttgccttgtg tgtgttgtgt tgagagaaga aatggcacac aagctgttac
     2461 tgttcttgag aggcggcacc gctgttacat ttacctccgt acctgttgtt gcccgcagag
     2521 ggctgcgtct tggatgattt cgaggctggc tttaggatct agtcaagtgg ccgtgttaac
     2581 taggtcccct ttgccggttt ctctagtttt agtttactga taggttttat gctgctaaga
     2641 gtccgaccaa cagcctcgct cgatggggtc ttcactgtgg ctacaaccgc cagtctcagc
     2701 tgtgagaagg tttgggatat gtggtcattc ataagggtct agtagcaagg cagttcgttc
     2761 ccataccctc agcaggggca aggtgtcagg agcggagggc actccttgct acacagctca
     2821 gatcgcctga ttggatcgtg aaagtccctt ggcagctaga tccaaattgg ggaccgagct
     2881 ttctgtttag gttggaaagc tttgggtatc ccgtggtgcc accagacggg gcagcctgga
     2941 tggatggaag aagggctcca cctttctcct catttccaaa gaaacacggt tttgtagagt
     3001 gagaaccctt gatgtcaaac cttctgtcaa gagcagggag gacagagagc cacctcagtg
     3061 tagccgtctg ccatctggct acctccttaa ccttgcgtct ccctgtcacg gagaggtgtc
     3121 tcagacagca gcagtcttgc cttaatttac accgagtctc ccactcagga tggtttgacc
     3181 tacagtgcag atgagaagac catgtgagtt tgtggtggat cacaagccct tctggattaa
     3241 aggaacccaa gtaacttggt ggtacatagc agggtgtgca ttctgactgt cctagttggg
     3301 tgacttgttt acttggtaac agtgtgggag tttggcagtt cacctttgac ctgctggaat
     3361 tatcctgatc tgtcattgca tcacccccag ggggcgctct tggatggtag ctggcttagg
     3421 cctcccacgc agctgtttgg ctccattctt agtctatgaa agggtcttac ccagaaaagg
     3481 ctggagagaa cccttaatct tgcatactta taaggcggca ctccagtagc tcatactacc
     3541 tcaccctgct caggtgagct ctaagagtcc ctaactttgg gcccagccac cgacactgcc
     3601 ccctggtggg actcagcagc gctctgggct gtttcataag caagtggttt taattaactc
     3661 acaaagcctt tctagacatt aatatttatt ttattattat tttttgtttt gtttggtata
     3721 catactaccc agcatctctt ttcaataagt gactttagga aaattagttt ctctcaagca
     3781 aggagccaca ttccaacaaa gggttacgtc tgaggagagg aagacagggg tgtaagcagg
     3841 agagagtatg ccaggccttt taagcagcag tttctcccag tgtagtctct agcagaacaa
     3901 acccaggtca gtcacaggaa gaaggttttt gcacagtttt atccttctga cacaaggagc
     3961 ctcctataca tatatatgtg tgtgtgtgtg tgtatacata catatatgta tgtatacata
     4021 catacatata tatatatata tatatatata gacatagagg cagaccaaag cagtacacag
     4081 ttgagccggt cagcggcctc tttccccggc tgtgagtcgg tgtgcagggc cttcccaagg
     4141 gcccgaatgg tgtagctcga gtagttgagg atacccctca ccatctaaac gaggcatttt
     4201 cagggaagtc agtcgttgct gtagctctta gtgtctgact cggagtctac actggggatg
     4261 tgtagcacac tacagttcca ggtctgctga gttttctatc cccgccctcc ctctgctgct
     4321 gccgaggagt gagcattgac tggttgactt gagacaggtc gctgagagtg gagaaacccc
     4381 cttgtcctta gcgtaaggca tctccgatgc tgggtagtct gtgtacttaa cctgaaactg
     4441 tgaagttttc cctttttgcc ataaaccaaa aggcagatct ttgaggtttt gcccttgaaa
     4501 cattaaaaca caaactgtat tttctgatcc cttcaggtta attgatcagg gaggtccagt
     4561 tggtcccagt cagacatgta gcaattggga ccagtagctc acaaggcttg ttgcccaaac
     4621 catatctctt cgggtagccc catgtttcct ctctgtgaag ttgtatttgc ttccctgcag
     4681 ttagttcctc ctgagggcac tccgggacac ctggtgggag gagttaactt tattttgcat
     4741 ttttaacttt acacccattt gagttcatcc ccacccccac ccttggattc ccgtttggca
     4801 ctatcccctg ttgtattgct gtagagctct ccttgacctt catctttgcc tgcccccccc
     4861 ccactcccac ccccaccccc gccactaccg ctccctattt ttgtttttgt ttttgttttt
     4921 ttttggtcta cacttagagc cagctgtaca gtgttcagaa cttttgttca gcaattctta
     4981 ggattgtcca gttggctatt tgcagaacat taagccagac tcggggacat ccctagcttg
     5041 tttcctaagg ggaaactgta atgttgatgt ggcacactgg cattaacagc ctgtgctgct
     5101 tgtggccaga ggataagatg tgtccacatg tgctggtgtc cctgacagct ccgtgacgcc
     5161 acggacgtca gatagcccta ctcaatgaac cccaggattt ggttctaaat tttaaggttc
     5221 tgtggagctc ccacagttta tgctagtcgg ggaataaaga ggtattggtg gggtcaggtg
     5281 accctaagaa caaggcatgg gtgagaattt ctcttacttt attgtgacct atccccagcc
     5341 ccgtgtgtac cgggcaaacc tgtaaacccc agagcttttc gcccaggcag ggctttgcta
     5401 ctgattatct tccttttctg gcttcctgct gtgctctctc caccagaccc gagactactc
     5461 aactctgaaa gtgaacttaa atccctttac agatggacag tgaatttgtt ggcatgggaa
     5521 cgagccctat ggagtggtct ctgtctgtct gtctgggagt gcgttcacgt cccagtccca
     5581 ttgggtgagt cagaaatcgg gtgcacagca tccatctcgg tgtgatgacg cgtcacagtc
     5641 aatgtcaaga ggaagatggc acctgtggca gcgatcctga tattttcctt ctgccggtcc
     5701 ccacccaccc tgcccggagt agctcaagtc tcttctgaag cagagaaacg ttgctgtcta
     5761 actccttcca ttaaattaag aagtactgac ctcctaatat ttaagtgttt actatctgct
     5821 gtaaagtttt gtatattttg taaacctttt tccccaaaac agtagacatc taaaatcgta
     5881 catctgattc ttttatattt cattgttcag cacaaagtgt ggtttttatt tagaataaaa
     5941 aaagaaacag acagagaaaa aaaaaaaa
//
