LOCUS       NM_001356489            3977 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus zinc finger and BTB domain containing 37 (Zbtb37),
            transcript variant 2, mRNA.
ACCESSION   NM_001356489 XM_006496838
VERSION     NM_001356489.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3977)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3977)
  AUTHORS   Medeiros de Araujo,J.A., Barao,S., Mateos-White,I., Espinosa,A.,
            Costa,M.R., Gil-Sanz,C. and Muller,U.
  TITLE     ZBTB20 is crucial for the specification of a subset of callosal
            projection neurons and astrocytes in the mammalian neocortex
  JOURNAL   Development 148 (16) (2021)
   PUBMED   34351428
REFERENCE   3  (bases 1 to 3977)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   4  (bases 1 to 3977)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC163327.2.
            
            On Oct 5, 2017 this sequence version replaced XM_006496838.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK145226.1, SRR7345562.5169448.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164135, SAMN01164137
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-72                AC163327.2         116999-117070       c
            73-269              AC163327.2         116309-116505       c
            270-1226            AC163327.2         114026-114982       c
            1227-1326           AC163327.2         111863-111962       c
            1327-3977           AC163327.2         99977-102627        c
FEATURES             Location/Qualifiers
     source          1..3977
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 69.75 cM"
     gene            1..3977
                     /gene="Zbtb37"
                     /gene_synonym="D430004I08Rik"
                     /note="zinc finger and BTB domain containing 37"
                     /db_xref="GeneID:240869"
                     /db_xref="MGI:MGI:2444467"
     exon            1..72
                     /gene="Zbtb37"
                     /gene_synonym="D430004I08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            73..269
                     /gene="Zbtb37"
                     /gene_synonym="D430004I08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            270..1226
                     /gene="Zbtb37"
                     /gene_synonym="D430004I08Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             298..1812
                     /gene="Zbtb37"
                     /gene_synonym="D430004I08Rik"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein
                     37"
                     /protein_id="NP_001343418.1"
                     /db_xref="CCDS:CCDS15412.1"
                     /db_xref="GeneID:240869"
                     /db_xref="MGI:MGI:2444467"
                     /translation="MTMEKSGNIQLEIPDFSNSVLSHLNQLRMQGRLCDIVVNVQGQA
                     FRAHKVVLAASSPYFRDHMSLNEMSTVSISVIKNPTVFEQLLSFCYTGRICLQLADII
                     SYLTAASFLQMQHIIDKCTQILEGIHFKINVAEVEAELSQTRTKHQERPPESHRATPN
                     LNRSLSPRHNASKGNWRGQVSAVLDIRELSPPEEPTSPQIIEQSSDAEGREPILRINR
                     AGQWYVETGLADQGARSGDEVRVLGAVHIKTENLEEWLGPENQPSGEDGSSAEEVTAM
                     VIDTTGHGSIGQESYTLGSSGAKVARPTSSEVDRFSPSGSVVSMTERHRARSESPGRM
                     DEPKQLSSQVEESAMMGVSAYVEYLREQEVSERWFRYNPRLTCIYCAKSFNQKGSLDR
                     HMRLHMGITPFVCRMCGKKYTRKDQLEYHIRKHTGNKPFHCHVCGKSFPFQAILNQHF
                     RKNHPGCIPLEGPHSISPETTVTSRQAEEGSPSHEEIVAPGESAQGSVSTTGPD"
     exon            1227..1326
                     /gene="Zbtb37"
                     /gene_synonym="D430004I08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1327..3977
                     /gene="Zbtb37"
                     /gene_synonym="D430004I08Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3007..3012
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zbtb37"
                     /gene_synonym="D430004I08Rik"
                     /note="hexamer: CATAAA"
     polyA_site      3027
                     /gene="Zbtb37"
                     /gene_synonym="D430004I08Rik"
                     /note="major polyA site"
     regulatory      3116..3121
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zbtb37"
                     /gene_synonym="D430004I08Rik"
                     /note="hexamer: AATAAA"
     polyA_site      3142
                     /gene="Zbtb37"
                     /gene_synonym="D430004I08Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggaggagggg gcggggggtt tcacttccgg gacggtgttc cggcccattc cggcccattt
       61 ccacccccgg agctctcgcc ccttcagtgc cgacgctaga gaaagacttt actccagggg
      121 cttcctcctc actggggaat cgctggaaag agcaaacaaa aaaggcgctg gtgtaggctc
      181 caaaataaac atctgaattc gtgatggcat cgacagaggc acttaatgga ttaaaagttt
      241 caaaacaaac aataacgctt tggaaaaagg gttgaatgtc tgcctgtgct ttcaggcatg
      301 accatggaga aaagtgggaa catacaattg gagatccccg acttcagcaa ctctgttctg
      361 agccatctca accagctacg aatgcaaggc cggctctgtg atattgtggt caatgtgcaa
      421 ggacaagctt ttcgggctca caaagtagta ctggctgcca gctcccctta tttccgggat
      481 cacatgtcct tgaatgaaat gagtactgtg tccatttctg tcatcaagaa ccctactgtt
      541 tttgagcaac ttctttcttt ctgttacaca gggcggatat gcctgcaact agcagatatc
      601 atcagctacc taacagctgc tagttttctg cagatgcagc atattataga caaatgtacg
      661 cagatcctag agggcattca cttcaaaatt aatgtggctg aggttgaagc agaattaagt
      721 caaacaagga caaagcatca agagagacct ccagagtctc atagggctac accaaatcta
      781 aaccgctcac ttagtccacg gcataatgcc tcaaagggaa actggagagg gcaggtcagt
      841 gccgtgctgg atatccgaga gctcagtccc ccggaggagc ccaccagtcc tcagataatt
      901 gaacagagtt ctgatgcaga aggccgggag cccattcttc gaatcaacag agcaggacag
      961 tggtatgtgg aaacaggact agcagaccag ggggcccgga gtggtgacga agttagggtt
     1021 cttggagcag tgcacatcaa aactgaaaat ctagaagagt ggcttgggcc agagaatcag
     1081 ccttctggag aagatgggag tagtgcagag gaagtcacag ccatggtgat tgacaccaca
     1141 ggccatggtt ctataggaca ggaaagttat actttagggt cttcaggagc caaggtagct
     1201 cggccaacca gcagtgaagt tgacagattt agtccctccg gcagtgttgt ttccatgaca
     1261 gaaagacaca gagccagaag tgagtctcct gggagaatgg atgagcctaa gcaacttagc
     1321 tcccaggtag aagagtcagc aatgatggga gtaagcgcct atgtggagta tctccgagaa
     1381 caagaagtgt ccgaacgatg gttccggtat aatccccgtc tcacctgcat ctactgtgcc
     1441 aaatctttca accaaaaggg aagtctggac cgccacatgc gcctgcatat gggaatcaca
     1501 ccgtttgtct gccgcatgtg tggaaaaaag tatacccgga aagaccagct ggaatatcac
     1561 atccgcaagc acacaggcaa caagcccttt cactgtcacg tttgtggcaa aagtttcccc
     1621 ttccaggcca tcttgaatca gcactttcga aaaaaccacc ctggttgtat acccctggaa
     1681 gggcctcata gcatttctcc tgagactact gtcacttccc ggcaagctga agaagggtca
     1741 ccttcacacg aagaaatagt tgctcctgga gaatctgccc agggctcagt ttctactact
     1801 gggccagatt gaaacattga gggggagggg gcaaaccctc ttcccctttg ggccgtaacc
     1861 agcccctgtc aggaccatgg attggtactt agattcacaa aatgccacgt cactcaacta
     1921 gaagatgttc ccatggtttt gccaaattag aagaccaaca tgcggaaggc actaaaggct
     1981 cttctcctcg ttcccacctc atactctgga aaataagcaa gcaaatcagc ttctaattca
     2041 gggatcaaca gccttggttt gttaacttta taacaaaaaa gatgttttta aacaaactga
     2101 tcaatgactc atttatcaac cagtcatgat tgaacaccat acttaggtcc atatcatctt
     2161 gatgggtgaa atcccagatc taaaaaacag cagcaggagc tttggccaag tgaagcagcc
     2221 tgccagaaga gaggaaggta gtcacaatgg tgagagaggg gaatctttct ttcctcttcc
     2281 ctgccagagc atgcatttcc atgtttaaag ggaaaaaaaa gatgaatact ggtgggtctt
     2341 aatagtctga aaggttagac tgatgttagc ctggtgaggc atctaatact tgcctagttg
     2401 tttcatgtga tcagctgaag gtagctggct acctcggagt atttagcagg cagaagcacc
     2461 tgaagcactt gggccttgga gaagtaaaat gagcccctaa gcgtttacaa taggcactca
     2521 tgagagcttg ggaaaaagga gcaggggagg aagtacttgg atgctttgca gatactgcac
     2581 agctcagagc tcaactgcag cttcctgttt ggtgtttgta aagcatagta cttgcatact
     2641 cccttcggtg ttacagaaat gtttctagtt atgtgatttc acttgttagg ctgactacca
     2701 aaagttcatc ctcttgagct cctaagtttc atataacagc aatatttaca tcaaaatgtc
     2761 actttccagt gaaatgagct tggattgtat ttttaagtcc acaggtctcc acatttgata
     2821 acttttatat ggggttttta aacagttttt ttctgcaatg ttaatagttg aagagagatt
     2881 caacactatt gttcttattg caaccacagt ttaatttcct tcaacgtgtt ttatacttca
     2941 tattttcagt ccattgaaga acctcactta agtccgtgtc ttgggtatgc aaatctatat
     3001 ataattcata aaccaattag caaattgctg gtgactccaa gagctatgtt ttttggtttg
     3061 tttttttttt taaataatac actacagggc acttcatcat gcacaatcat gttgcaataa
     3121 atgatcaagg gatcaattct tatcaggtgt ggttatacta tcattcctaa gatttttaaa
     3181 acttcaagga gcttttttag tgatcttgag ttttctgaga ttcttaaccc agctctgaaa
     3241 gaatttacca aacacacaga gctttatatg cccatcttgc atgcagagag agaggaggaa
     3301 tattaaatga tacaggcaaa tgaatgcctg cactctaccg tgcaaataca agtctctagc
     3361 ttgaggaatt ttaagagaat atttaaatgt ataattgttg tggtacaggg atgtggatga
     3421 ttctaagaga tttgggagtt gggctggtcc tacctgcact agtgagccat gtatgagaat
     3481 gtgaagctcg tgtgctcctt cctgtgagca ctctgtggta tgtgaaaagg tcagggaaag
     3541 ccatttttta ataagaaact ggaatgcaga aggtggcttt gaacaatctg agaatcagat
     3601 atactgtatc actagagaaa gattttctct tctgaagaag tatagacatt catctttcaa
     3661 aggagtatgt ggtagtcccc ttgaagagcc tgcccttaaa agcagcactg gtgagcagtg
     3721 tcgcatctct ggtcatcaca ggctacttag tcttgctact tagttgggca acagcatgat
     3781 aaagtgaaaa ctgtctccta gagccacctt agggactact gtgctctggg gcatcaaaac
     3841 agagctgaag ttgtacggaa actttttagt ttgtacttca ggtcttcagt ggacagatgt
     3901 tatcattact gatcaggcag gtagctgaca cgtacagaag agactgcttc agatggaatt
     3961 ttttttttaa gccaacc
//
