LOCUS       NM_001098237            2011 bp    mRNA    linear   ROD 08-JUN-2024
DEFINITION  Mus musculus zinc finger and BTB domain containing 3 (Zbtb3),
            transcript variant 1, mRNA.
ACCESSION   NM_001098237
VERSION     NM_001098237.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2011)
  AUTHORS   Medeiros de Araujo,J.A., Barao,S., Mateos-White,I., Espinosa,A.,
            Costa,M.R., Gil-Sanz,C. and Muller,U.
  TITLE     ZBTB20 is crucial for the specification of a subset of callosal
            projection neurons and astrocytes in the mammalian neocortex
  JOURNAL   Development 148 (16) (2021)
   PUBMED   34351428
REFERENCE   2  (bases 1 to 2011)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2011)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   4  (bases 1 to 2011)
  AUTHORS   Pang,A.L., Taylor,H.C., Johnson,W., Alexander,S., Chen,Y., Su,Y.A.,
            Li,X., Ravindranath,N., Dym,M., Rennert,O.M. and Chan,W.Y.
  TITLE     Identification of differentially expressed genes in mouse
            spermatogenesis
  JOURNAL   J Androl 24 (6), 899-911 (2003)
   PUBMED   14581517
REFERENCE   5  (bases 1 to 2011)
  AUTHORS   Floyd,J.A., Gold,D.A., Concepcion,D., Poon,T.H., Wang,X.,
            Keithley,E., Chen,D., Ward,E.J., Chinn,S.B., Friedman,R.A.,
            Yu,H.T., Moriwaki,K., Shiroishi,T. and Hamilton,B.A.
  TITLE     A natural allele of Nxf1 suppresses retrovirus insertional
            mutations
  JOURNAL   Nat Genet 35 (3), 221-228 (2003)
   PUBMED   14517553
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC129217.3.
            
            On May 23, 2019 this sequence version replaced NM_001098237.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC012410.1, ERR2680377.521527.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-138               AC129217.3         35347-35484
            139-2011            AC129217.3         35773-37645
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 5.65 cM"
     gene            1..2011
                     /gene="Zbtb3"
                     /gene_synonym="4930563M09Rik"
                     /note="zinc finger and BTB domain containing 3"
                     /db_xref="GeneID:75291"
                     /db_xref="MGI:MGI:1922541"
     exon            1..138
                     /gene="Zbtb3"
                     /gene_synonym="4930563M09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            139..2011
                     /gene="Zbtb3"
                     /gene_synonym="4930563M09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             190..1746
                     /gene="Zbtb3"
                     /gene_synonym="4930563M09Rik"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein 3"
                     /protein_id="NP_001091707.1"
                     /db_xref="CCDS:CCDS29548.1"
                     /db_xref="GeneID:75291"
                     /db_xref="MGI:MGI:1922541"
                     /translation="MEFPEHSQQLLQSLREQRSQGFLCDCTVMVGSTQFLAHRAVLAS
                     CSPFFQLFYKERELDKRDLVCIHNEIVTAPAFGLLLDFMYAGQLALRGDTPLEDVLAA
                     ASYLHMNDIVKVCKQRLQARALAEADSTKKEEETNPASLEFLSGSSRGPQPLLASVEP
                     SARWNKEEWKGPATPLPIAHPADEPPVSGGADTTQPSMEVDSSHLRAPPPPVADVSVS
                     LASPSSSTETIPVNYFSSGLPGVSVEPLTPLDVVPESLRVVEPRDTGGPLQGFYPPAP
                     APPPAPAPVLSQAPAPVEAELVQVKVEAIVISDEEADLSEEQPHRSEGLFPPGGAVYG
                     GQPSQAEAFEEPGATGLEEVGPSDHFLPPESHLPYHLLPGPGQYHRGLVTSPLPAPAA
                     LHEPLYPPPEYEAAQGSFGNFTEDVPTCKTCGKTFSCSYTLRRHATVHTRERPYECRY
                     CLRSYTQSGDLYRHIRKAHNEDLAKRSKPDPEASTILGVQPLSGSQTTERHSSGGGGP
                     PKEFALGPKN"
     regulatory      1990..1995
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zbtb3"
                     /gene_synonym="4930563M09Rik"
                     /note="hexamer: CATAAA"
     polyA_site      2011
                     /gene="Zbtb3"
                     /gene_synonym="4930563M09Rik"
                     /note="major polyA site"
ORIGIN      
        1 ctctgctagt tcctacgttg ggagtcctta gccttggagt tcgagaggga aaagcgcagg
       61 aagttccggg tctggggcgt gaaggcatca cccgggaaag cttgggcgca aaagacagtc
      121 ctagttggag gactcattgg agtcagtggt agggaactct cttgggcacc cttccctcct
      181 tggggtgcta tggagttccc agaacacagt cagcagctgc ttcagagcct gcgggagcaa
      241 cggtcccagg gtttcctttg tgactgcact gtgatggttg gtagtaccca gttcttggcc
      301 catcgggctg tgctggcctc ctgcagccca ttctttcagc ttttctacaa ggagcgggaa
      361 ttggacaaga gggacctggt gtgtattcac aatgagattg tcacggcccc agcctttggg
      421 ttgcttttgg actttatgta tgctggccag ctggccctta ggggagatac tcctctagaa
      481 gatgtgctgg cagctgccag ctacttgcac atgaatgaca ttgttaaggt ttgtaagcaa
      541 cgattgcagg cccgagctct ggcagaggca gacagtacca agaaggaaga ggaaaccaat
      601 cctgctagtc tggagttttt gtcaggcagt tctcgaggcc cacagccttt actggcatct
      661 gttgaaccgt cagcccgctg gaacaaagag gaatggaagg gtccagccac tcccttaccc
      721 attgctcatc ctgcagatga gccaccagta tctggggggg cagacactac acaaccaagc
      781 atggaagttg actcatcaca tcttcgggca cctcctccac cagtggctga tgtctccgtc
      841 tctcttgcca gcccaagtag ctctacagag accattcctg taaactactt ctcttctggc
      901 cttccaggag tttcggtgga gcccttgact cctcttgatg tggttcctga gagtctgagg
      961 gtggtggaac caagggatac tggaggacca ttgcaaggct tctatccccc agctccagcc
     1021 ccacccccag cgccagcccc agttctatcc caggctccag ccccagttga agctgaactg
     1081 gtccaggtaa aagtagaagc tattgtgatc tctgatgagg aggctgactt gtcagaggaa
     1141 cagccccaca gatctgaagg gctgttccca cctggaggag cagtgtatgg gggacagccc
     1201 tcacaggcag aggcttttga ggagccaggg gcaacaggac tagaggaggt ggggccaagt
     1261 gaccacttcc tgcctccgga atctcatcta ccataccatc tgctgccagg tccagggcag
     1321 tatcatcgag ggctggtaac ctcacccctg cctgcaccag cagccctgca tgaaccactc
     1381 taccctcctc ctgagtatga agcagcccaa gggagctttg gaaattttac agaggatgtt
     1441 cccacctgca agacttgtgg aaagaccttc tcatgttctt atacactaag gcgacatgcc
     1501 acagtgcaca cacgtgagcg gccctatgag tgccgctatt gcctacgaag ctacacacag
     1561 tcaggggacc tctaccgcca catccgcaag gctcacaatg aggacctggc caaacgcagc
     1621 aaaccagatc cagaggctag caccattcta ggggtgcagc ccctctctgg ctcccaaacg
     1681 acagagagac atagcagtgg tggtggaggt ccacccaaag aatttgcact tggtcctaaa
     1741 aattaacatc tggggagcat gaactgatgc caggcctgct cttaccattg ctagatggct
     1801 acagagaagg ctggaagcac ctcatcactc cagggtggca gaatgaaggt tcttcccaac
     1861 ccgaagctgt ctaccctttt ctttgcccag ccagataaac aggatgttat agggcagagc
     1921 aagtcagcca gttctccaag ggcactgaga attttcctga ggtgtaactg ctcattccac
     1981 attctggaac ataaaactag cactgaaatt a
//
