LOCUS       NM_001364543            7628 bp    mRNA    linear   ROD 04-MAR-2025
DEFINITION  Mus musculus zinc finger and BTB domain containing 16 (Zbtb16),
            transcript variant 2, mRNA.
ACCESSION   NM_001364543 XM_006510258
VERSION     NM_001364543.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 7628)
  AUTHORS   He,Z., Yan,R.G., Shang,Q.B. and Yang,Q.E.
  TITLE     Transcriptomic dynamics and cell-to-cell communication during the
            transition of prospermatogonia to spermatogonia revealed at
            single-cell resolution
  JOURNAL   BMC Genomics 26 (1), 58 (2025)
   PUBMED   39838296
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7628)
  AUTHORS   Trinh,L.T., Finnel,R.R., Osipovich,A.B., Musselman,J.R.,
            Sampson,L.L., Wright,C.V.E. and Magnuson,M.A.
  TITLE     Positive autoregulation of Sox17 is necessary for gallbladder and
            extrahepatic bile duct formation
  JOURNAL   Development 152 (2) (2025)
   PUBMED   39745200
REFERENCE   3  (bases 1 to 7628)
  AUTHORS   Liu,Q., Tabrez,S., Niekamp,P. and Kim,C.H.
  TITLE     Circadian-clock-controlled endocrine and cytokine signals regulate
            multipotential innate lymphoid cell progenitors in the bone marrow
  JOURNAL   Cell Rep 43 (5), 114200 (2024)
   PUBMED   38717905
REFERENCE   4  (bases 1 to 7628)
  AUTHORS   Wen,Y., Zhou,S., Gui,Y., Li,Z., Yin,L., Xu,W., Feng,S., Ma,X.,
            Gan,S., Xiong,M., Dong,J., Cheng,K., Wang,X. and Yuan,S.
  TITLE     hnRNPU is required for spermatogonial stem cell pool establishment
            in mice
  JOURNAL   Cell Rep 43 (4), 114113 (2024)
   PUBMED   38625792
REFERENCE   5  (bases 1 to 7628)
  AUTHORS   Sivori,M., Dempsey,B., Chettouh,Z., Boismoreau,F., Ayerdi,M.,
            Eymael,A., Baulande,S., Lameiras,S., Coulpier,F., Delattre,O.,
            Rohrer,H., Mirabeau,O. and Brunet,J.F.
  TITLE     The pelvic organs receive no parasympathetic innervation
  JOURNAL   Elife 12, 91576 (2024)
   PUBMED   38488657
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 7628)
  AUTHORS   Johnson,D.R. and Hunt,D.M.
  TITLE     Hop-sterile, a mutant gene affecting sperm tail development in the
            mouse
  JOURNAL   J Embryol Exp Morphol 25 (2), 223-236 (1971)
   PUBMED   5088020
REFERENCE   7  (bases 1 to 7628)
  AUTHORS   Hutton,J.J. and Roderick,T.H.
  TITLE     Linkage analyses using biochemical variants in mice. 3. Linkage
            relationships of eleven biochemical markers
  JOURNAL   Biochem Genet 4 (2), 339-350 (1970)
   PUBMED   5424503
REFERENCE   8  (bases 1 to 7628)
  AUTHORS   Burda,D.J. and Center,E.M.
  TITLE     Development of luxoid (lu) skeletal defects in vitro
  JOURNAL   J Embryol Exp Morphol 21 (2), 347-360 (1969)
   PUBMED   5822891
REFERENCE   9  (bases 1 to 7628)
  AUTHORS   Center,E.M., Hunter,R.L. and Dodge,A.H.
  TITLE     Effects of the luxoid gene (lu) on liver esterase isozymes of the
            mouse
  JOURNAL   Genetics 55 (2), 349-358 (1967)
   PUBMED   6067640
REFERENCE   10 (bases 1 to 7628)
  AUTHORS   Deol,M.S. and Green,M.C.
  TITLE     Snell's waltzer, a new mutation affecting behaviour and the inner
            ear in the mouse
  JOURNAL   Genet Res 8 (3), 339-345 (1966)
   PUBMED   5980120
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT009741.12 and AC113548.22.
            
            On Jun 21, 2018 this sequence version replaced XM_006510258.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR9219379.45009.1, Z47205.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164135 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-172               CT009741.12        100255-100426
            173-1529            CT009741.12        103381-104737
            1530-1627           CT009741.12        192919-193016
            1628-1714           AC113548.22        172405-172491       c
            1715-1885           AC113548.22        120277-120447       c
            1886-2053           AC113548.22        114795-114962       c
            2054-7628           AC113548.22        106919-112493       c
FEATURES             Location/Qualifiers
     source          1..7628
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 26.47 cM"
     gene            1..7628
                     /gene="Zbtb16"
                     /gene_synonym="lu; PLZF; Zfp145"
                     /note="zinc finger and BTB domain containing 16"
                     /db_xref="GeneID:235320"
                     /db_xref="MGI:MGI:103222"
     exon            1..172
                     /gene="Zbtb16"
                     /gene_synonym="lu; PLZF; Zfp145"
                     /inference="alignment:Splign:2.1.0"
     exon            173..1529
                     /gene="Zbtb16"
                     /gene_synonym="lu; PLZF; Zfp145"
                     /inference="alignment:Splign:2.1.0"
     CDS             262..2283
                     /gene="Zbtb16"
                     /gene_synonym="lu; PLZF; Zfp145"
                     /note="zinc finger protein 145; Green's luxoid"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein
                     16"
                     /protein_id="NP_001351472.1"
                     /db_xref="CCDS:CCDS23158.1"
                     /db_xref="GeneID:235320"
                     /db_xref="MGI:MGI:103222"
                     /translation="MDLTKMGMIQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQE
                     FHAHRTVLACTSKMFEILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKAEDLDDL
                     LYAAEILEIEYLEEQCLKILETIQASDDNDTEATMADGGGEEEEDRKARYLKNIFISK
                     HSSEESGYASVAGQSLPGPMVDQSPSVSTSFGLSAMSPTKAAVDSLMSIGQSLLQGTL
                     QPPAGPEEPTLAGGGRHPGVAEVKMEMMQVDEAPGQDSPGAAESSISGGMGDKLEERS
                     KEGPGTPTRGSVITSARELHYGREESGEQLSPPVEAGQGPPGRQEPLAPPVEKHLGIY
                     SVLPNHKADAVLSMPSSVTSGLHVQPALAVSMDFSTYGGLLPQGFIQRELFSKLGELA
                     VGMKAESRPLGEQCSVCGVELPDNEAVEQHRKLHSGMKTYGCELCGKRFLDSLRLRMH
                     LLAHSAGAKAFVCDQCGAQFSKEDALETHRQTHTGTDMAVFCLLCGKRFQAQSALQQH
                     MEVHAGVRSYICSECNRTFPSHTALKRHLRSHTGDHPYECEFCGSCFRDESTLKSHKR
                     IHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTH
                     NGASPYQCTICTEYCPSLSSMQKHMKGHKPEEIPPDWRIEKTYLYLCYV"
     exon            1530..1627
                     /gene="Zbtb16"
                     /gene_synonym="lu; PLZF; Zfp145"
                     /inference="alignment:Splign:2.1.0"
     exon            1628..1714
                     /gene="Zbtb16"
                     /gene_synonym="lu; PLZF; Zfp145"
                     /inference="alignment:Splign:2.1.0"
     exon            1715..1885
                     /gene="Zbtb16"
                     /gene_synonym="lu; PLZF; Zfp145"
                     /inference="alignment:Splign:2.1.0"
     exon            1886..2053
                     /gene="Zbtb16"
                     /gene_synonym="lu; PLZF; Zfp145"
                     /inference="alignment:Splign:2.1.0"
     exon            2054..7628
                     /gene="Zbtb16"
                     /gene_synonym="lu; PLZF; Zfp145"
                     /inference="alignment:Splign:2.1.0"
     regulatory      7603..7608
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zbtb16"
                     /gene_synonym="lu; PLZF; Zfp145"
                     /note="hexamer: AATAAA"
     polyA_site      7628
                     /gene="Zbtb16"
                     /gene_synonym="lu; PLZF; Zfp145"
                     /note="major polyA site"
ORIGIN      
        1 agagaggagt taagggtgac gagagcgggt actgcgaact gccgggcgat gccgccgctg
       61 ccgccgtgag atccggagca acagttcccc agcaacaccc cttccccgat ccaggcacac
      121 ccctaacccc ccaggcacgc acacccaccc caagctccag gctccgtaag cgtcccctct
      181 gctggccccg acatctacac cgccccacct tgcagagcag agaaggaaag agagccccat
      241 gcctgagccc aggggagcat catggatctg acaaagatgg ggatgatcca gctgcagaac
      301 cctagccacc ccacggggct gctgtgcaag gccaatcaga tgcgactggc tgggactttg
      361 tgcgatgtgg tcatcatggt ggacagccag gagttccatg cccaccggac ggtgctagcc
      421 tgcaccagca agatgtttga gatcctcttc caccgaaaca gccagcacta tactctagac
      481 ttcctctcgc caaaaacctt ccagcagatc ctggagtacg cctacacggc cacactgcaa
      541 gccaaggcgg aggacctgga tgacctgctg tatgcagctg agattttaga gatcgaatac
      601 ctggaggagc agtgcctgaa gatcctggag accatccagg catctgatga caatgacaca
      661 gaggccacca tggctgacgg tgggggcgaa gaagaagagg accgtaaggc tcgatacctc
      721 aagaacatct ttatctcgaa gcattccagc gaggagagtg gctacgccag tgtggctgga
      781 cagagcctcc ctgggcccat ggtggaccag agcccctcag tctccacctc tttcggtctc
      841 tcagccatga gtcctaccaa ggcagccgtg gacagcttga tgagtatagg acagtcactc
      901 ctgcaaggaa ctcttcagcc acctgcaggg cctgaggagc ccacactggc agggggtggg
      961 cgacaccctg gggtggctga ggtgaagatg gaaatgatgc aggtagatga agcccctggc
     1021 caggacagcc ctggggcagc tgagtctagc atctcaggag ggatggggga caagcttgaa
     1081 gagaggagca aagaggggcc tgggaccccg actcgaggca gtgtcatcac tagtgccaga
     1141 gagctgcatt atgggagaga ggagagtggt gagcagctct cgcctcctgt tgaagctggc
     1201 cagggacccc ctgggcggca ggagcccctg gcacccccag tggagaagca tttgggtatc
     1261 tactcggtgc tgcccaacca caaggccgat gctgtgttga gcatgccgtc ttcagtgacg
     1321 tccggtctcc atgtgcaacc tgccctggca gtctccatgg acttcagcac ctacgggggt
     1381 ctgctgcctc agggcttcat ccagagggag ctgttcagca agctggggga gctggctgtg
     1441 ggcatgaagg ctgagagccg ccctctgggg gagcagtgca gcgtgtgtgg ggtcgagctt
     1501 ccggacaacg aggcagtgga gcagcacagg aaactgcaca gtgggatgaa aacatacggg
     1561 tgtgaactct gcggaaaacg gttcctggac agtttgcgac tgagaatgca tttactggct
     1621 cattcagcgg gtgccaaagc ctttgtgtgt gatcaatgcg gtgcccagtt ctcaaaggag
     1681 gatgccctgg agacacacag acagacccat actggcacgg acatggctgt cttctgtctg
     1741 ctgtgtggga aacgctttca ggcacaaagc gcactccagc agcacatgga ggtccacgca
     1801 ggcgtgcgca gctatatttg cagtgagtgc aaccgcacct tccccagcca cacggctctc
     1861 aagcgccacc ttcgctcaca tacaggtgac cacccatatg agtgtgagtt ctgcggcagc
     1921 tgcttccggg atgagagcac actcaagagc cacaagcgca tccacacagg ggagaagccc
     1981 tatgagtgta atggctgtgg caagaagttc agcctcaagc accagttgga gacgcactac
     2041 agggttcaca caggtgagaa gccctttgag tgcaaactct gccaccagcg ctcccgagac
     2101 tactcggcca tgatcaagca cctgagaaca cacaacggtg cctcgccata ccagtgtacc
     2161 atctgcacgg aatactgccc cagcctctcc tccatgcaga aacacatgaa gggccacaag
     2221 ccggaggaga tcccacctga ctggaggata gagaagacgt acctctacct gtgttatgtg
     2281 tgaagggggg ggcatccccc ccaacacatg gtagagcagt ggcaggagcc agcaaaggcg
     2341 agctagaacc agacaaagtg gaaagactac ggagaaaaga ataacagaaa agaaaagggg
     2401 gaaatagaaa aaagagagaa ggagaaggaa gcctgatagt tacttggcct tggattattt
     2461 cctggggctc caggtgatct ggctatcaaa ccactgcccc ctccctgggg tctctgccct
     2521 ccttggttct cttgggtggg tggggtgggt ttgctcattc acacaggggc atatttttct
     2581 cctctccaca acctataact tcgttttgtg tctagaaatg gaaaccagga agcagaggtg
     2641 agggtctctc tggtcagagc catgacctct tagacctcct ttcccctcct ctgaagagga
     2701 tgggagggga gcaaagaggg agaggcagag atgggggggg ggtccccagc tgatgctcag
     2761 agtggcagct ctggcgtcat ggcgggagag gctttctgct ctgcccagct acagctggtg
     2821 cccctcactg tctctgagag tccagtggct ctcctcaccc ttcagctttt tgcacctgct
     2881 tttgatggct gttctctggt cacaaggggc ttacaccgtc tgtggatctg aactgtatct
     2941 tccctgggtt cctcctaggg aaagctgtgt cagattccaa aacttcttcc ttccttcctt
     3001 ccttccttcc ttccttcctt ccttccttcc ttccttcctt ccttccttcc ttccttcctt
     3061 ccttccctta gctttcagag aacacagaac aaaataaagc aggcattgta ccccacccaa
     3121 actccctcat gagcaagagt cctgctgagc tgcactctgc ttgcaaatgg aaacaaagat
     3181 caaacaaaaa ccaactaaat atattctatc ccaccctcca aacaagtaca catccctgca
     3241 accgcagctc agcccctagg ggaaggaatc tcatcatcct attgaaaggc ccctttgccc
     3301 cagatgggga gtgaatgccc cctctcaggt gagctttacg tggtggaggt gggagtggat
     3361 gccctgcctg atcagagtgg gaggattggc cactggagaa cgttactgtc actgaggatc
     3421 ctctaagcac agggagaacc ctagatctgg agattagcac cgacttcctg gctgggagtg
     3481 gaggtggtgg ggctgccccc agggagcaga ggggaggagc tgatggcgct tctggcctct
     3541 tgtcatgttt gcttttagca cattgtactt gaattacctc agtttctttc tttttttctt
     3601 tctttttttt ttttgtgacc tcatgagctt ttgaatcccc tatctccttc cccacccttt
     3661 tggttgtgag agatattaga ggaactggga gggtgtcatt ttctgttcta gtggaagtta
     3721 atagttggct ttgaacttga cctggtagag gccctcccct tctctggctg gaagctgtag
     3781 gaaaaagtgg accattcagg atctgagtgg aggccaggag ggctgagaag gtggtgggag
     3841 tggagggaag gacgactggg ttgtcactat gtctccccat agtatcacta gtcactgttg
     3901 gcaccaccca gggctcagac catcagtgcc cagctttagt tcagccggaa acactctgga
     3961 gaaaggtccc agtggtctta gaattatctg ggctgtttag gttctagagg gcctgttatt
     4021 aagatctata cagccacgtg gtctcctgcc gttaatactg ccagagttgg tatattttca
     4081 tggctgctgt ctgtgtacat gaggggcaga tgagccaggt tttgttgtgc tgggtggggt
     4141 attgtttttc taaaagctac ctcttctgtt tgtccagtct ttggttcctt ctgcagctct
     4201 gcctcctcca gcctccctgc cctgaatttt gggaagcaca tttgtaataa tctcctttgc
     4261 tttgggacgg acccacaccc acttcatttc gtgctttatg tatgtgtaag agacctgttg
     4321 tcttttcctc tcctcctcct ctttctctga gagagagtca tggctgtgtt ttgatctcag
     4381 attttaaaaa gtggtttagg aaaaaaccgt tgacaggggc aaagggccat gaaaaggaac
     4441 agaaagtccg aggggtggcc gctgctgtag ccacgccccc tattcaccgg ccacgccccc
     4501 atcccgccca tttttacccc ctacaatttc atccatctta tctgaaggcc ttaagaaaaa
     4561 acatgtgttg agaggatatg ggctggggtc gcttgactct cagtgtgagg tagggatggt
     4621 aaagtgcaga ggggactatt tggaactgta gggatgactt agtgcattgg gaaggaaaaa
     4681 aaaaccctta agcttgaaat acgtggccag aacagctgtt gtgcttataa tgtgaaaaga
     4741 ggatcttcta gaaaagagtg gtctttaaaa gtcgtcatat actatggctt attcccctga
     4801 ccagggggat gaagtgtgaa ctgctcacct tcagggatct ttaactccca gaaaacagca
     4861 tttttaacag gaagatgtca ttcaagatcg gtgacaaaga gaaaaccttt cgactcctcc
     4921 atagaactgg ctggtccctt gcctcccaac ccttcccact cagcctgccc cacacagacc
     4981 cccgcccaac cataaaagct ggagagggct gagctgatct tttcaaactg taatattttt
     5041 gtagtatttg ttatttcttc cgttctacag gaccttgctc ttttcctttt gtaatgtgaa
     5101 caggggtggg ggtgaaaaag gaaaaagtaa aaaaaaaaaa agttcatggc catcaacagc
     5161 aaaatctgta cgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     5221 tgtgtgtgtg tgtgtctgga ggtgaagtca cgaggtattg tctgtgctgc tgtctcagtg
     5281 ttggttggta cttgctcagc ctgccctgtc tgtcactgag ggctctggga tcctagtgga
     5341 gacagggacc gcttagaagg gaccccttcc ttctgtttct cttggagcca agacacctgc
     5401 ccctatgttc catcaggcct tccccccagt ttcccattca ggaagaggaa atggtttgga
     5461 agttgccagg gccttctctg ctgggcttgt tggccagtgg gcagggagga gctgtctgaa
     5521 gcctctggag cacggagctg aggaggctgg aagggtggag gccctttctt tcccagggta
     5581 aactgtgttt ccactcgttg agacgtctgg atagtcacgc ctctgccttt ggccatgttg
     5641 ttaacagaac cctggaaccc ccgacttgct gctgccttat ccagctcggt gaccttctcc
     5701 ccacctagca aatccaagct gctcactggt ccctccccct gcccagtttc tacgaatgac
     5761 tcccttcatg cctctgacta cactgacccc cccatcagtg cttctcccct gcttactcct
     5821 ttgctcattt aaagcattaa aatcctatat gtatatagga tagacaaata tatatatatt
     5881 atatatatag aaagagatat agcaagagag atataagata gagaaatgtc attgctgctt
     5941 ggttgcttta catgaagaag aggaaggcag gtctggggta caaggggtgg gttagaaggc
     6001 tgggtgagcc cagtgattca gtacaatcca gggataccac acgggcttgt gtaaatcttc
     6061 gtgcctgaac agtttttcca tgttgagaaa aaaaaaaaaa agaaaactgc tgcagatttt
     6121 tagggatgta tggtattgct gccaggtacc gtgggggcag ccgggatggg aggaccagtg
     6181 tcccttagag gagacaggaa gcacttttgg tcttggggca tggtggggga agtggagcgg
     6241 gtagtagact ttttggccat tcccctagcc agccagacta gggtggacac tggggaatgt
     6301 gagacagata cacaaagagc tggggggctg cggttctgtt gatttatctc ccccaccccc
     6361 cacttgctat cttctccccc ccttctatac agccttgccc tctcctgaat cttctgaccc
     6421 ggctatggtg gccgcactta cctggaggtt cctggaggag gacaaacagc agaactaaca
     6481 atgggtggag gaggataaaa aagagatgcc caagagaagg gttggggaca aacagaatag
     6541 atggagtcag gggaaagagt gaggagaagg gagagaaagc cccagcaagc ctgcccacca
     6601 gcagctctga gtcctcggct cctgggtggc ccactttgca gacagggtcc ctcctccccg
     6661 agtgtatcat agtacttgtt cacatagtgt tatgcatgaa tcctcgtaag gtgaagaacc
     6721 gtcatgatgc accatgccat cgccctatat ataaagataa atatatatat atgtatgtat
     6781 gtatgtaagt tatagcactg agggccctct ggccctgttg gaccaagcaa aactaagcct
     6841 tttggtttgg gtgtcatgtt tccttgtttt tttgtttttt ttttgttttt gttttgtttt
     6901 gttttgtttt ttgttttctt gttttttttt cttttttttt cttgtctgat gtgagagcac
     6961 aggtgccagt ctagttgctt cgttatcaca gaatagtgtt tttaattcat caatgttcta
     7021 gttaatgtct acctcagcac ctcctcttag cctaattcta ggaggttgcc caattttgtt
     7081 tcttcaattt tattggttct tttggttgtt gtacaaatca ctctccccac ccttggcccc
     7141 tccccctttc tcctctcctg tctctccccc cacccaccct ctcctcccct caggtccgac
     7201 tccctccctc cagttagccc catctcacca ctccccttgc cttcacttgc ctccagtcca
     7261 gactgctttc tgtccacttg gaagtgcgct ccccgttgca gccgcttacc tacccacacc
     7321 tgccttcctt ctgtgtagat tgatgcattt cttgttaact tcagtgtttc tgacaagact
     7381 ttaaaaaaaa aaaaaaggaa aaaaagtgaa tttactgctg caggtttttt tctccatgtg
     7441 tcaccaagtg aagtttgtgc cttctatagc aaagagaata ttttttacat cctactaaca
     7501 gtagattttt ttgtagtgaa cattttttgt atttttattt ataagtctca taagaaaaat
     7561 agcgatgttc agttgtatac cttgaatctg cagttagaag agaataaagt taactcagtt
     7621 gtctctgg
//
