LOCUS       NM_001005341            4902 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus yippee like 2 (Ypel2), mRNA.
ACCESSION   NM_001005341 XM_126366
VERSION     NM_001005341.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4902)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 4902)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4902)
  AUTHORS   Lachke,S.A., Ho,J.W., Kryukov,G.V., O'Connell,D.J., Aboukhalil,A.,
            Bulyk,M.L., Park,P.J. and Maas,R.L.
  TITLE     iSyTE: integrated Systems Tool for Eye gene discovery
  JOURNAL   Invest Ophthalmol Vis Sci 53 (3), 1617-1627 (2012)
   PUBMED   22323457
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 4902)
  AUTHORS   Hosono,K., Noda,S., Shimizu,A., Nakanishi,N., Ohtsubo,M.,
            Shimizu,N. and Minoshima,S.
  TITLE     YPEL5 protein of the YPEL gene family is involved in the cell cycle
            progression by interacting with two distinct proteins RanBPM and
            RanBP10
  JOURNAL   Genomics 96 (2), 102-111 (2010)
   PUBMED   20580816
REFERENCE   5  (bases 1 to 4902)
  AUTHORS   Shimogori,T., Lee,D.A., Miranda-Angulo,A., Yang,Y., Wang,H.,
            Jiang,L., Yoshida,A.C., Kataoka,A., Mashiko,H., Avetisyan,M.,
            Qi,L., Qian,J. and Blackshaw,S.
  TITLE     A genomic atlas of mouse hypothalamic development
  JOURNAL   Nat Neurosci 13 (6), 767-775 (2010)
   PUBMED   20436479
REFERENCE   6  (bases 1 to 4902)
  AUTHORS   Hosono,K., Sasaki,T., Minoshima,S. and Shimizu,N.
  TITLE     Identification and characterization of a novel gene family YPEL in
            a wide spectrum of eukaryotic species
  JOURNAL   Gene 340 (1), 31-43 (2004)
   PUBMED   15556292
REFERENCE   7  (bases 1 to 4902)
  AUTHORS   Carninci,P., Waki,K., Shiraki,T., Konno,H., Shibata,K., Itoh,M.,
            Aizawa,K., Arakawa,T., Ishii,Y., Sasaki,D., Bono,H., Kondo,S.,
            Sugahara,Y., Saito,R., Osato,N., Fukuda,S., Sato,K., Watahiki,A.,
            Hirozane-Kishikawa,T., Nakamura,M., Shibata,Y., Yasunishi,A.,
            Kikuchi,N., Yoshiki,A., Kusakabe,M., Gustincich,S., Beisel,K.,
            Pavan,W., Aidinis,V., Nakagawara,A., Held,W.A., Iwata,H., Kono,T.,
            Nakauchi,H., Lyons,P., Wells,C., Hume,D.A., Fagiolini,M.,
            Hensch,T.K., Brinkmeier,M., Camper,S., Hirota,J., Mombaerts,P.,
            Muramatsu,M., Okazaki,Y., Kawai,J. and Hayashizaki,Y.
  TITLE     Targeting a complex transcriptome: the construction of the mouse
            full-length cDNA encyclopedia
  JOURNAL   Genome Res 13 (6B), 1273-1289 (2003)
   PUBMED   12819125
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY768876.1, BC121190.1 and BB656522.1.
            
            [WARNING] On Feb 7, 2025 this sequence was replaced by
            NM_001005341.4.
            
            On Oct 3, 2006 this sequence version replaced NM_001005341.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC121190.1, AK021387.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164141 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-128               BY768876.1         7-134
            129-3106            BC121190.1         1-2978
            3107-3221           BB656522.1         352-466
            3222-4902           BC121190.1         3093-4773
FEATURES             Location/Qualifiers
     source          1..4902
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 51.82 cM"
     gene            1..4902
                     /gene="Ypel2"
                     /gene_synonym="6430570G24; E130113K08Rik"
                     /note="yippee like 2"
                     /db_xref="GeneID:77864"
                     /db_xref="MGI:MGI:1925114"
     exon            1..171
                     /gene="Ypel2"
                     /gene_synonym="6430570G24; E130113K08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            172..485
                     /gene="Ypel2"
                     /gene_synonym="6430570G24; E130113K08Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             369..728
                     /gene="Ypel2"
                     /gene_synonym="6430570G24; E130113K08Rik"
                     /note="ortholog of human yippee-like 2 YPEL2"
                     /codon_start=1
                     /product="protein yippee-like 2"
                     /protein_id="NP_001005341.1"
                     /db_xref="CCDS:CCDS25205.1"
                     /db_xref="GeneID:77864"
                     /db_xref="MGI:MGI:1925114"
                     /translation="MVKMTRSKTFQAYLPSCHRTYSCIHCRAHLANHDELISKSFQGS
                     QGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKE
                     GKYIIELAHMIKDNGWD"
     exon            486..529
                     /gene="Ypel2"
                     /gene_synonym="6430570G24; E130113K08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            530..638
                     /gene="Ypel2"
                     /gene_synonym="6430570G24; E130113K08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            639..4902
                     /gene="Ypel2"
                     /gene_synonym="6430570G24; E130113K08Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4882..4887
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ypel2"
                     /gene_synonym="6430570G24; E130113K08Rik"
                     /note="hexamer: AATAAA"
     polyA_site      4902
                     /gene="Ypel2"
                     /gene_synonym="6430570G24; E130113K08Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggcaagcccc cagcccggat tcggagggat gcggagcggc agtggcggcg gcggtggcgg
       61 agactgtggc tttaagagcg cgcagggagc gctagagtca gccgtgcagt ccttcatcgc
      121 caagcactcc ggagagcccg gcgctggccg gaccgggcag cctaccgcca ggctgctgag
      181 aaccagctct agatctctgc tagagagtcc tccttctgca gacatcacca gtgtgtggag
      241 cctgccgcac acccaccccc tgacaaacca cggcctttac ctgtgtcttt cgctgtttcc
      301 cgtgcgaccc atcctgtggg agtgcctcgt gggctgcccc ggagtttgcc ccacgctcag
      361 cagcgccaat ggtgaagatg acaagatcca agacttttca ggcataccta ccctcctgcc
      421 acaggaccta cagctgcatc cactgccgag ctcacttggc caatcacgac gaactcattt
      481 ccaagtcctt ccagggaagt caagggcgag cctacctctt caactcagta gttaatgtgg
      541 gctgtgggcc tgcagaagag cgggtgttgc taacaggact acatgccgtt gcagacattt
      601 actgtgaaaa ctgcaaaacc actttgggct ggaaatatga acatgctttt gaaagcagtc
      661 agaaatataa agaaggcaaa tacatcattg aattagcaca catgatcaag gacaatggct
      721 gggactgacc tgatagcatc catccggtcc agcatccatg tgaatgccac ccaactgaac
      781 attctaccca agcgtgagag agtgactgaa cacactcggt tccatcaact taggggcctt
      841 gccatcaggg gtcatcctcc caccctgaca ccatcatttt tggtgactgg cctctaaatc
      901 actgtctctc tgtctctttg ctttgtatct gtttgtgagt tgatcttggc ttctctgttc
      961 tagtgttggc tgaaaacagt tacgagctgg aacggaccct tggctgcatg gtggcagccc
     1021 tacttgaggg ggggtggccc tgcccacatg agagctgcct gatggctgtc agaacatcgg
     1081 catgtgagca tgagcaacag aacaggggaa cctgggagtc ctaggattgg ggaaggggca
     1141 agagggtgca atataactgt actgttcttg gagacctgct aacttaggct tgaaataatt
     1201 gactccttca aaaggacaaa gagaaaaaaa aatacctcgt ggcttttgtt ctctctgatg
     1261 atacactcct gccctagcat cagatgtgcc aggacagcgg attagcacaa gaagcatcct
     1321 tgattctagc tgacagggca ggaccctagc attctggacc tggactggag aaggtcctgc
     1381 taaagagaat ggggggtggg gagtgtgtgt gtgtgtgggg gggggtaaag ctcagtgggt
     1441 tttagtgatt ctgccctctt tcccccccgc cccctcctgg gcaatcacct tcttggtctt
     1501 cttaactgat ttaggttgca ggaaaagata caagatgtgt gtgtcccatt tagcccaaag
     1561 cacagtaaaa atcggtaatg gaggagagcc aggagctgga ggcgttgctg tggaccggga
     1621 actcctgata gcaagcagga aatgtaaaaa tgcagaggca aggttctggg aggaagagtt
     1681 cagattggag ccagtgaagg cttagcacat ctttcctcat ccgatgatca gtagcttcca
     1741 tgggaccagc aattctttgt gcacaacgtt tctgagtttt gggttttttt tcccccctcc
     1801 aattttatca ccataacctg gaaacaaaga tccaagatta cacctccatt cttagccctg
     1861 actctcctat gtggatagac atcttttaac agtgtggtcc agcagtaggg agggattaca
     1921 gattcaatat tactccttca cccaccgcac gcacccaagc ttccttgagt tagggttggg
     1981 gaggaaagaa aaaataatcc ctgtaaatct cttaaaatga aaaagaattt attgtgtgta
     2041 atcaacactg tgaaggctgt gttgcatcaa tccagctatt atgtggattt gaaatcctgt
     2101 ttgaatccat ttcgtttatt tcttaggcag aagataatgt taaaatatgg gcatattagg
     2161 tacttctcag aatcttgttc tctagctagg ctggtcctac aggaaaattc acctctgaaa
     2221 aaaaaaagcc caagaagaga aggagcaaga gtgagctcat ggagataaga gcctgttgcc
     2281 tggctaacca atgctaaagc atccctccag gaacattttc cagtccacat ccccagcaga
     2341 accaaattcc atcagggaga aagccgtggt ggacacggct ttgtcctgat ctggaaatgg
     2401 acaaattgag acttgccagg gcaataggaa gtcagccagc tcagtagact gcctgtcttc
     2461 tgggacacaa aaggattcct agaaacagaa ttttgttcct caagtctgct tgtcctgggc
     2521 cctggaagac tagctctgcc ccacccccac ccccacccca ctgcacagca aggcccactg
     2581 agggccagaa aaactacccg tgactcccag gctcaagtgg tcagtgacac acatttctcc
     2641 agtttcacat tcctaagact tgccagctcc aagcgtcatc cattgtcccc tctttatcct
     2701 gttcgaagat gtggccttca ttaaagattt gattagaccc tttgctcagg gaatacctag
     2761 ctacatacac actacaagtc cttttttttt tttttttttt taactagggg gtggggatca
     2821 aacctaggta gtttcttaaa aactaaagtt ggtgacttgc agaaactgga tctatggtgc
     2881 cctgggtgga gaaaggggca gggtccttga actacaagtt tgggggtggg accaaaactc
     2941 atcaggcttc cctttgtgac ggtgaaacca aaagtgcttc ttatgaccat tcttagctcc
     3001 actcacagct tgtctaccta acacttagca gtattagcga gtcctcagcc cagcgggcgg
     3061 cagaggctcc tgcacccaag gcctctctgg tcagtttttt tttttttcct caccaaatga
     3121 ttgactcagc ataaccaaag acctcacccc ttcactccac ataggttcag ggaaagggaa
     3181 gtcctttggg tgaccttggg caggggtggg caaggacaga agaggagaaa gggaaggcct
     3241 gagggtacct cagccgccag ctaccttcac tttgaagtct agctgaccag ctctcgctcc
     3301 acctgccctg tgccactgtg gatgatgggg ctattgtcac cctggaatcc atccacccac
     3361 ccccgcccca cctccgcatc tccccccagg ctgctgatga gtaaatcaac atgagtcaag
     3421 tatagccaag cttgatgctt gcatgctcgc agcgggacct ggctgagtac cgaccacccc
     3481 agctcctatg acagatcatg tagataaagt aaagatctca gctggtggat caatgtgtac
     3541 aaaagaggtg tcccctttat agtggagatt tccaagtata tacatatata tctatacagt
     3601 cgcttgtgaa atatactttt gtaaataata tttaattttt ttaaataata tatttggtgc
     3661 tgtattctca gacccccctg agagcacttt tattttcaat tctatagctt cctctgtgtt
     3721 atattttaag ggaaaggata atcaacaaga cacttttttt tttcctttaa ggatctgtaa
     3781 ctataaaatg gattgaggct ttaaaacatt tttgcagttt tctgtttgca tttttaccca
     3841 gcagaacaga ctagtaaatt accaggttgt gaattgatac tttcttgccc agtattggct
     3901 agaaaagaaa caagcttagt agtaacaact tcagagtaat tactgtagtt gggagaactt
     3961 ccaagaaatt ggaatagaca gagagagagt gtgtgtgtgt ttcatttttc tgtttccttt
     4021 cctactgagg acactatgaa ctacagttta caccttaggc acagagtttt ccctctggtt
     4081 ttcatgtgtg agtggaccaa gagcccaaag caagattttc tttccctgag ggtggagccg
     4141 cggccagttc ctcttctgtg tgttcagctt ctacagccag tgaagcaaat ctgtgaagag
     4201 agccagcgtg aagtctgcgc ttctgagacg ggagcagctc agccgcgctc acatcccggg
     4261 gctctggctg ttctagaagc cgtgtcatat tagaagttaa caagttcagg tttaaaagga
     4321 tagtaatagc tttttttttt ttaaagtcag attgcttggg gttcaggcag aggctggcaa
     4381 atcaaatctt gaacacactt ttatattaaa aaatctgcct caatggaaat actagtccta
     4441 tgactgggaa agattgtctt tgaaattgtg gttgattaat aaaattacta tacagtcatg
     4501 aaatgtaccc gaaaggcgtt gtcctcctgg agttagatct gtccagcgtc ttacagtggt
     4561 ttggtgagaa caggagtcaa cttccttttc ccagcctgca aagactgtgt accatggatt
     4621 tgtctgtctg tctgtctgtc tgtgtttaca aactgtattt gttgggtttg gaattgcttt
     4681 tgttgttact tttttcttct ttttttgttc ctttcttggg tgggaatttt ttccccaggt
     4741 cactttgctt cagtaacaaa ggcaattgtt tttgaataat ttgtcttcac ctccttccgg
     4801 tatttgtaca taatgattca gtattagtaa gaagtgcgtt atttctgtca ttgctgatct
     4861 gtgttggtgc tcatttgaga aaataaagtt ttcaaatact aa
//
