LOCUS       NM_026570               1418 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus YEATS domain containing 4 (Yeats4), mRNA.
ACCESSION   NM_026570
VERSION     NM_026570.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1418)
  AUTHORS   El-Saafin,F., Bergamasco,M.I., Chen,Y., May,R.E., Esakky,P.,
            Hediyeh-Zadeh,S., Dixon,M., Wilcox,S., Davis,M.J., Strasser,A.,
            Smyth,G.K., Thomas,T. and Voss,A.K.
  TITLE     Loss of TAF8 causes TFIID dysfunction and p53-mediated apoptotic
            neuronal cell death
  JOURNAL   Cell Death Differ 29 (5), 1013-1027 (2022)
   PUBMED   35361962
REFERENCE   2  (bases 1 to 1418)
  AUTHORS   Woodruff,E.D., Gutierrez,G.C., Van Otterloo,E., Williams,T. and
            Cohn,M.J.
  TITLE     Anomalous incisor morphology indicates tissue-specific roles for
            Tfap2a and Tfap2b in tooth development
  JOURNAL   Dev Biol 472, 67-74 (2021)
   PUBMED   33460639
REFERENCE   3  (bases 1 to 1418)
  AUTHORS   Liu,B., Yang,L., Zhu,X., Li,H., Zhu,P., Wu,J., Lu,T., He,L.,
            Liu,N., Meng,S., Zhou,L., Ye,B., Tian,Y. and Fan,Z.
  TITLE     Yeats4 drives ILC lineage commitment via activation of Lmo4
            transcription
  JOURNAL   J Exp Med 216 (11), 2653-2668 (2019)
   PUBMED   31434684
  REMARK    GeneRIF: Findings indicate that the YEATS domain-containing protein
            4 (Yeats4)-LIM domain transcription factor LMO4 (Lmo4) axis is
            required for Innate lymphoid cells (ILCs) lineage commitment.
REFERENCE   4  (bases 1 to 1418)
  AUTHORS   Jacquet,K., Fradet-Turcotte,A., Avvakumov,N., Lambert,J.P.,
            Roques,C., Pandita,R.K., Paquet,E., Herst,P., Gingras,A.C.,
            Pandita,T.K., Legube,G., Doyon,Y., Durocher,D. and Cote,J.
  TITLE     The TIP60 Complex Regulates Bivalent Chromatin Recognition by 53BP1
            through Direct H4K20me Binding and H2AK15 Acetylation
  JOURNAL   Mol Cell 62 (3), 409-421 (2016)
   PUBMED   27153538
REFERENCE   5  (bases 1 to 1418)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   6  (bases 1 to 1418)
  AUTHORS   Ruhl,D.D., Jin,J., Cai,Y., Swanson,S., Florens,L., Washburn,M.P.,
            Conaway,R.C., Conaway,J.W. and Chrivia,J.C.
  TITLE     Purification of a human SRCAP complex that remodels chromatin by
            incorporating the histone variant H2A.Z into nucleosomes
  JOURNAL   Biochemistry 45 (17), 5671-5677 (2006)
   PUBMED   16634648
REFERENCE   7  (bases 1 to 1418)
  AUTHORS   Doyon,Y., Selleck,W., Lane,W.S., Tan,S. and Cote,J.
  TITLE     Structural and functional conservation of the NuA4 histone
            acetyltransferase complex from yeast to humans
  JOURNAL   Mol Cell Biol 24 (5), 1884-1896 (2004)
   PUBMED   14966270
REFERENCE   8  (bases 1 to 1418)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   9  (bases 1 to 1418)
  AUTHORS   Munnia,A., Schutz,N., Romeike,B.F., Maldener,E., Glass,B., Maas,R.,
            Nastainczyk,W., Feiden,W., Fischer,U. and Meese,E.
  TITLE     Expression, cellular distribution and protein binding of the glioma
            amplified sequence (GAS41), a highly conserved putative
            transcription factor
  JOURNAL   Oncogene 20 (35), 4853-4863 (2001)
   PUBMED   11521196
REFERENCE   10 (bases 1 to 1418)
  AUTHORS   Harborth,J., Weber,K. and Osborn,M.
  TITLE     GAS41, a highly conserved protein in eukaryotic nuclei, binds to
            NuMA
  JOURNAL   J Biol Chem 275 (41), 31979-31985 (2000)
   PUBMED   10913114
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK010522.1 and CJ213771.1.
            
            On Apr 10, 2009 this sequence version replaced NM_026570.3.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK012096.1, AK010522.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1327              AK010522.1         2-1328
            1328-1418           CJ213771.1         302-392
FEATURES             Location/Qualifiers
     source          1..1418
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 65.26 cM"
     gene            1..1418
                     /gene="Yeats4"
                     /gene_synonym="4930573H17Rik; B230215M10Rik; GAS41;
                     NuBI-1"
                     /note="YEATS domain containing 4"
                     /db_xref="GeneID:64050"
                     /db_xref="MGI:MGI:1927224"
     exon            1..249
                     /gene="Yeats4"
                     /gene_synonym="4930573H17Rik; B230215M10Rik; GAS41;
                     NuBI-1"
                     /inference="alignment:Splign:2.1.0"
     CDS             199..882
                     /gene="Yeats4"
                     /gene_synonym="4930573H17Rik; B230215M10Rik; GAS41;
                     NuBI-1"
                     /note="glioma-amplified sequence-41; glioma-amplified
                     sequence 41 homolog"
                     /codon_start=1
                     /product="YEATS domain-containing protein 4"
                     /protein_id="NP_080846.1"
                     /db_xref="CCDS:CCDS24191.1"
                     /db_xref="GeneID:64050"
                     /db_xref="MGI:MGI:1927224"
                     /translation="MFKRMAEFGPDSGGRVKGVTIVKPIVYGNVARYFGKKREEDGHT
                     HQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWGEFEIIIKI
                     FFIDPNERPVTLYHLLKLFQSDTNAMLGKKTVVSEFYDEMIFQDPTAMMQQLLTTSRQ
                     LTLGAYKHETEFAELEVKTREKLEAAKKKTSFEIAELKERLKASRETINCLKNEIRKL
                     EEDDQTKDI"
     exon            250..369
                     /gene="Yeats4"
                     /gene_synonym="4930573H17Rik; B230215M10Rik; GAS41;
                     NuBI-1"
                     /inference="alignment:Splign:2.1.0"
     exon            370..436
                     /gene="Yeats4"
                     /gene_synonym="4930573H17Rik; B230215M10Rik; GAS41;
                     NuBI-1"
                     /inference="alignment:Splign:2.1.0"
     exon            437..531
                     /gene="Yeats4"
                     /gene_synonym="4930573H17Rik; B230215M10Rik; GAS41;
                     NuBI-1"
                     /inference="alignment:Splign:2.1.0"
     exon            532..624
                     /gene="Yeats4"
                     /gene_synonym="4930573H17Rik; B230215M10Rik; GAS41;
                     NuBI-1"
                     /inference="alignment:Splign:2.1.0"
     exon            625..712
                     /gene="Yeats4"
                     /gene_synonym="4930573H17Rik; B230215M10Rik; GAS41;
                     NuBI-1"
                     /inference="alignment:Splign:2.1.0"
     exon            713..1408
                     /gene="Yeats4"
                     /gene_synonym="4930573H17Rik; B230215M10Rik; GAS41;
                     NuBI-1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1309..1314
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Yeats4"
                     /gene_synonym="4930573H17Rik; B230215M10Rik; GAS41;
                     NuBI-1"
                     /note="hexamer: AATAAA"
     polyA_site      1332
                     /gene="Yeats4"
                     /gene_synonym="4930573H17Rik; B230215M10Rik; GAS41;
                     NuBI-1"
                     /note="major polyA site"
     regulatory      1382..1387
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Yeats4"
                     /gene_synonym="4930573H17Rik; B230215M10Rik; GAS41;
                     NuBI-1"
                     /note="hexamer: AATAAA"
     polyA_site      1408
                     /gene="Yeats4"
                     /gene_synonym="4930573H17Rik; B230215M10Rik; GAS41;
                     NuBI-1"
                     /note="major polyA site"
ORIGIN      
        1 gccgccctcc cccgcccttc cgctcggctc tcccagctcg gggctgaatg gccgaccccg
       61 acgcggcgcg tgtggaggag gtggctgtcc ggctccccga gcccaggcga cccgccctcc
      121 tccggctcgt gaggggagcg gctaccccgc cggcctgagc tctctccctg gccgccgcgg
      181 ctccttcccg gggacaatat gttcaagaga atggcggaat ttggacctga ctccggcggg
      241 agagtgaagg gggttaccat cgttaagcca atcgtttatg gcaatgttgc caggtacttt
      301 ggaaagaaga gagaagaaga cgggcacact caccagtgga ctgtgtacgt gaagccctac
      361 agaaacgagg atatgtcagc atatgtgaag aagatccagt ttaaattaca cgaaagctac
      421 ggcaatcctc taagagtcgt caccaagcct ccatatgaaa tcacagaaac aggatggggt
      481 gaatttgaaa tcatcatcaa gatatttttc attgacccca acgagagacc tgtgactctg
      541 taccacttac tgaagctctt ccagtctgac accaatgcca tgctggggaa gaaaacagtg
      601 gtttcagagt tctatgacga aatgatattt caagacccaa cggcaatgat gcagcagctg
      661 cttacgacgt ctcgccagct gacattggga gcctataagc acgaaacaga gtttgcagaa
      721 cttgaagtga aaaccagaga aaaattagaa gctgccaaga aaaaaacaag ctttgagatt
      781 gcggagctta aggagagatt aaaagcaagt cgtgaaacta taaactgttt aaaaaatgaa
      841 atcaggaagc ttgaagaaga cgatcagacg aaagacattt gagcaactgg cggtaagtcg
      901 gctgcagagc cggggcgccg cggagggact tgccacagac gctgcggtgt ttctgggagg
      961 agctgcgagc gcggtcccca gccggccgtg gctttctcag agaggactcc aggtacccac
     1021 actgtcaggc tgcctcccgg ggcacatgtg tgctctaaga ctcgatgctg ggtagcattc
     1081 cacgacgtta agcacaactt ttaaagtgtt tgttttgttt taaattgaac tctatgtgta
     1141 gtttatcctc ctcaggcagg cgtagcggtt gtgttgtaaa gtctaacgtg tgcgggtttt
     1201 gtacctctct cctaggtagg attagtgact ggtatgtgtg tttagttctt caggtccaca
     1261 tctgccccgg tctacctctt ttgtatatga tgtatctagg aagtgtttaa taaatgtagt
     1321 ttactgctcc tgtgtctgcc tcttgtgact tctccaatca ctttaccgcc ttgtgtttgc
     1381 aaataaatgt tattctttga gaattttaaa aaaaaaaa
//
