LOCUS       NM_001164258            2631 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus X-ray radiation resistance associated 1 (Xrra1), mRNA.
ACCESSION   NM_001164258 XM_194369 XM_905323
VERSION     NM_001164258.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2631)
  AUTHORS   Mesak,F.M., Osada,N., Hashimoto,K., Liu,Q.Y. and Ng,C.E.
  TITLE     Molecular cloning, genomic characterization and over-expression of
            a novel gene, XRRA1, identified from human colorectal cancer cell
            HCT116Clone2_XRR and macaque testis
  JOURNAL   BMC Genomics 4 (1), 32 (2003)
   PUBMED   12908878
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC151014.1 and BK000542.1.
            
            On or before Aug 19, 2009 this sequence version replaced
            XM_905323.3, XM_194369.7.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC151014.1, AK154558.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2121              BC151014.1         1-2121
            2122-2631           BK000542.1         1118-1627
FEATURES             Location/Qualifiers
     source          1..2631
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 54.15 cM"
     gene            1..2631
                     /gene="Xrra1"
                     /note="X-ray radiation resistance associated 1"
                     /db_xref="GeneID:446101"
                     /db_xref="MGI:MGI:2181647"
     exon            1..13
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            14..81
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            82..179
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     CDS             86..2446
                     /gene="Xrra1"
                     /codon_start=1
                     /product="X-ray radiation resistance-associated protein 1"
                     /protein_id="NP_001157730.1"
                     /db_xref="CCDS:CCDS52321.1"
                     /db_xref="GeneID:446101"
                     /db_xref="MGI:MGI:2181647"
                     /translation="MVSSGMYKMDNGKPCLNNCFPAKSLLRLPEEGRGHWIVVRKGSM
                     KKGAAKASTEGQESQKKVSFDTGLKKISRRDSQADVLGHILDRSFLLKHHSARKPSDL
                     CTINVSGMKFSKAKEKDFKHFTSVIYINASENLLPLDVFHTFPVLKELELAFNGIKMV
                     YVKYGDFKTLEFLDLSFNSLTEEAICDLGILPHLRVLLLTGNGLTSLPPNMAVKEQEA
                     SMTSLTSKKYILRFPALETLMLDDNKLSNPSCFASLAGLRRLKKLSLDQNKIVRIPYL
                     QQIQLRDGSGDWVTEGPNPQKELQPQMWIFETPDEQPNYTVLPMKKDVDRTEVVFSSY
                     PGFSTSETAKVCSLPPMFEILPVKSLKARNQTLAPPFPELRYLSLAYNKIAKEDAVLP
                     AALFPSLCELVFHNNPLVAHTRGIPPLLKSFLQDRLGIRLVRKKLVKPKHHMLMPRKE
                     SRKVKTYIPKVPKHSLVPHHLNMITDSPPSSLMPEPEHSTEDTSHEALFANEGPEGPS
                     LTHRAFVPMPPICSDSTVHSEAVSHQSHTAGLVSSEHPSDDDAKSTESIFLTQVNELP
                     SSTAHRENLEAVNDQRRPSTAPRETKRTRRKQTATSLHNKYDGYEELLTVKPDPAFLE
                     PKGIQKNAQALHRMLKQPLICRSSKPRLDTFQKPYVPKEKRAGRIPILPPRKTRAQLL
                     DDILIRMRDPRNVTEAPLGTVLQRRAQQRLVNQKQYREAKRLLKEFRARYRQLVRSSL
                     RTVFAASPPPRPPTRRALSAGQPKLGRFLEFMDEFCQEPTASDSKE"
     exon            180..355
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            356..427
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            428..500
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            501..598
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            599..732
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            733..861
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            862..1067
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            1068..1108
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            1109..1234
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            1235..1328
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            1329..1444
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            1445..1768
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            1769..1964
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            1965..2080
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            2081..2186
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     exon            2187..2631
                     /gene="Xrra1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2608..2613
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Xrra1"
                     /note="hexamer: AATAAA"
     polyA_site      2631
                     /gene="Xrra1"
                     /note="major polyA site"
ORIGIN      
        1 acgccgaagg caggtaaaga gacaggtaaa gaaacaaaag caaaaggaag gcaaagaatc
       61 attcccgagg tcaaagatca aggagatggt gtcttctgga atgtacaaaa tggacaatgg
      121 caagccttgc ctcaacaact gctttccagc caaaagtctc cttcggttgc cggaagaagg
      181 ccggggacac tggatagtgg tccggaaagg cagcatgaag aaaggtgcag ctaaggcatc
      241 caccgaaggt caggaaagcc agaagaaggt ttctttcgat actgggttga agaaaatatc
      301 tcggagggat agccaggcag acgttcttgg acacattttg gaccggtctt ttctgctgaa
      361 gcaccactct gccaggaagc catcagatct ttgcactatc aacgtgagcg gcatgaagtt
      421 ctccaaggca aaggaaaagg acttcaaaca ttttacgtct gtgatttata tcaatgcctc
      481 tgaaaacctg ctacctctag atgtctttca cacatttcca gttctaaagg aactggagct
      541 tgcgttcaat ggcatcaaga tggtctacgt gaaatatgga gacttcaaga cattggaatt
      601 cttggacctt tccttcaaca gcctgactga ggaggccatc tgtgatctgg ggattctgcc
      661 acatctccgt gtgctgctcc tcacaggcaa tgggctcacc tctctgccac ctaacatggc
      721 tgtcaaagaa caggaggcat ccatgacatc actgacaagc aagaagtaca tcctgaggtt
      781 cccagcgctg gagaccctga tgctggatga caacaaactg tccaatccca gctgctttgc
      841 cagtctggct gggctcagga gactgaagaa gttgagcctg gaccaaaaca agattgtccg
      901 gatcccgtac ttacaacaga ttcagctccg tgatgggtcg ggggactggg tcacagaggg
      961 accaaatccc cagaaagagc tgcagcccca gatgtggata tttgagacac ctgatgagca
     1021 accaaattat accgtactgc ccatgaagaa ggacgttgac cgcacagagg ttgtgttctc
     1081 ctcttaccct ggattttcaa cctcagagac agccaaggta tgctcacttc ctcccatgtt
     1141 tgagattctt cctgtgaagt cactgaaagc aaggaaccag acactggccc cgcctttccc
     1201 agagctgaga tatcttagcc tggcctacaa caagatcgca aaggaggatg ccgtcctgcc
     1261 agcagctctc ttcccctccc tctgtgagct tgtcttccat aacaaccctt tggtagcaca
     1321 cacacgaggg atcccaccac tgctgaaaag cttcctccag gatcgcctgg gcatccgctt
     1381 agttcgaaag aaactggtaa aacctaaaca ccatatgttg atgcctcgga aggagtcacg
     1441 gaaggtgaag acctacatcc ccaaggtgcc gaagcattct ctggtccccc atcacctcaa
     1501 catgatcaca gacagtcctc catcaagtct tatgccggag cccgagcact ccactgaaga
     1561 cacttctcac gaggcactgt ttgccaatga gggcccagaa ggcccttccc taactcaccg
     1621 ggcctttgtg ccgatgcctc ccatctgttc cgactccacc gttcacagcg aggcagtgtc
     1681 ccaccagagc catacagccg gcctcgtgag ctcagagcac ccatcagatg atgacgccaa
     1741 gagtacggag tccatcttcc tgacccaggt gaatgagctg ccatcctcca ccgcccacag
     1801 ggaaaatttg gaggcagtga atgaccaaag gagaccatca acagcaccca gagagacaaa
     1861 gaggactcgg aggaagcaga cggctacctc tctgcacaac aagtatgacg gctatgaaga
     1921 gctgctcaca gtcaagcctg accctgcgtt tttggagcca aagggcatcc agaagaacgc
     1981 acaggccctg catcgaatgc tgaagcagcc gctcatctgc cgctcctcca agcccaggct
     2041 ggacactttc cagaaaccct acgttcccaa ggagaagagg gccgggagga taccgattct
     2101 acccccacgg aagacccgag cgcagctgct ggatgatatc ctcattcgca tgcgggaccc
     2161 tcggaatgtt actgaggctc cactgggcac tgtgttgcag cggcgcgcac agcagcgcct
     2221 agtgaaccag aagcaatacc gagaggccaa gaggctgctc aaggagttcc gcgcacgcta
     2281 ccggcagctg gtacgcagct cgctgcggac tgtgttcgct gccagcccgc cgccaaggcc
     2341 gcctacccgc cgtgcgctga gcgccggcca gcccaagttg ggccgcttcc tcgagttcat
     2401 ggacgagttc tgccaggagc ccacggccag cgactcgaaa gagtagagct gcacaccgcc
     2461 ctccccaagg gctctgcgcc ctggactgtg cccagccctg aacagagggg gcttgggctc
     2521 catttcgctc cgtggtcagt atggggagca cagcaggacc ttgcctcgga gcccggccag
     2581 gctgcacctg gtggctggcc cagcagcaat aaagagtggt gtagagcaat a
//
