LOCUS       NM_183094               1247 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus X-linked lymphocyte-regulated 4C (Xlr4c), mRNA.
ACCESSION   NM_183094
VERSION     NM_183094.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1247)
  AUTHORS   He N, Lim SJ, Moreira de Mello JC, Navarro I, Bialecka M, Salvatori
            DCF, van der Westerlaken LAJ, Pereira LV and Chuva de Sousa Lopes
            SM.
  TITLE     At Term, XmO and XpO Mouse Placentas Show Differences in Glucose
            Metabolism in the Trophectoderm-Derived Outer Zone
  JOURNAL   Front Cell Dev Biol 5, 63 (2017)
   PUBMED   28680878
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1247)
  AUTHORS   Tamplin OJ, Cox BJ and Rossant J.
  TITLE     Integrated microarray and ChIP analysis identifies multiple Foxa2
            dependent target genes in the notochord
  JOURNAL   Dev Biol 360 (2), 415-425 (2011)
   PUBMED   22008794
REFERENCE   3  (bases 1 to 1247)
  AUTHORS   Raefski AS and O'Neill MJ.
  TITLE     Identification of a cluster of X-linked imprinted genes in mice
  JOURNAL   Nat Genet 37 (6), 620-624 (2005)
   PUBMED   15908953
REFERENCE   4  (bases 1 to 1247)
  AUTHORS   Davies W, Isles A, Smith R, Karunadasa D, Burrmann D, Humby T,
            Ojarikre O, Biggin C, Skuse D, Burgoyne P and Wilkinson L.
  TITLE     Xlr3b is a new imprinted candidate for X-linked parent-of-origin
            effects on cognitive function in mice
  JOURNAL   Nat Genet 37 (6), 625-629 (2005)
   PUBMED   15908950
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK166871.1 and AA190046.1.
            
            On Apr 7, 2007 this sequence version replaced NM_183094.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK166871.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1220              AK166871.1         2-1221
            1221-1247           AA190046.1         260-286
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 37.29 cM"
     gene            1..1247
                     /gene="Xlr4c"
                     /gene_synonym="2900036K24Rik"
                     /note="X-linked lymphocyte-regulated 4C"
                     /db_xref="GeneID:72891"
                     /db_xref="MGI:MGI:3574099"
     exon            1..155
                     /gene="Xlr4c"
                     /gene_synonym="2900036K24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            156..238
                     /gene="Xlr4c"
                     /gene_synonym="2900036K24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            239..366
                     /gene="Xlr4c"
                     /gene_synonym="2900036K24Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             270..917
                     /gene="Xlr4c"
                     /gene_synonym="2900036K24Rik"
                     /codon_start=1
                     /product="X-linked lymphocyte-regulated 4C"
                     /protein_id="NP_898917.2"
                     /db_xref="CCDS:CCDS41012.1"
                     /db_xref="GeneID:72891"
                     /db_xref="MGI:MGI:3574099"
                     /translation="MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGES
                     SSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDY
                     SHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHL
                     KNLQAIKCCRRKAIIEEARKLMDYLEKRVTEETVHVNKQEAKDGVQSSLLSLLFS"
     exon            367..435
                     /gene="Xlr4c"
                     /gene_synonym="2900036K24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            436..553
                     /gene="Xlr4c"
                     /gene_synonym="2900036K24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            554..653
                     /gene="Xlr4c"
                     /gene_synonym="2900036K24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            654..752
                     /gene="Xlr4c"
                     /gene_synonym="2900036K24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            753..848
                     /gene="Xlr4c"
                     /gene_synonym="2900036K24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            849..1223
                     /gene="Xlr4c"
                     /gene_synonym="2900036K24Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1201..1206
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Xlr4c"
                     /gene_synonym="2900036K24Rik"
                     /note="putative"
     polyA_site      1220
                     /gene="Xlr4c"
                     /gene_synonym="2900036K24Rik"
                     /note="putative"
ORIGIN      
        1 atatgcgccg gaaggcaggg cctaaccaag taggggcttt ttcctgggag gtaaagggtt
       61 ctgaggagat tgtggtgagg cagtgtcaga ggaaggtgac gcggaaggga agtactaacc
      121 cgaacgaagg aacgaaggga cgaagggacg ctgtgctttc atggatcgct gggtgccctg
      181 aggtgcacct ggaatctact tggtgagtac agctctcaaa cggaagtgcc gcctacagga
      241 ttcctgtcta gtgcagggag actatagtca tggcttccaa aatcaagggc agacctccca
      301 agcaaccaaa ggtgactcct gctctgccat ctaatgattc acagcagctt catgaaaata
      361 acccaggaaa caatctggcc cttgaaactt gtggggaaag cagttcttcc catggaacag
      421 gtggaccaaa gccagggccc agtaagaaaa ctctaaatga aaggaagaga aagtatgggg
      481 tgagtgtaaa taaaactgtc caaaacattg agtggaatgt tgaccacttc ttgaaagtcc
      541 agcatgagcg aaggcaggaa ctttataagg actattctca tcagtttttg actttggtta
      601 tgatgtggaa tatagatgta gaccaaatca agaaacaggc tggaaaactc tctgatatac
      661 ttgatgagca acagaagctt tttcaacaat ttcaaagtat tcatatgcag aaaatagaag
      721 aatttaagga gttatgtgat cgacacttga agaatctaca ggctattaag tgttgtcgcc
      781 gaaaagctat tattgaggaa gccagaaaac taatggacta cttggaaaag agagtcactg
      841 aagaaactgt tcacgtaaac aagcaggaag caaaggatgg tgttcaatca tcacttctat
      901 ccctgctatt ctcgtaacac ctggaagaaa gaagctcaac caccatgaaa tgacttcatg
      961 atatcttcta aatctatggt gacatgacac tgctattgta gtgattatca attccttgtt
     1021 cacatctctg aggcatcaga aaaactttac tgagaatgtt ttgtttgtgg aatttatcgc
     1081 acatgtagta tgggatcatc agggatatta tatatgaggt ctcgtgtaca gttaaagctc
     1141 gcgtcctgtg atttcctgta tgtataccct gggaaatcca tacttgggaa cgtttgattt
     1201 aataaacatg aaatagtttc agaaaaaaaa aaaaaaaaaa aaaaaaa
//
