LOCUS       XM_030244248            6226 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus xin actin-binding repeat containing 1
            (Xirp1), transcript variant X1, mRNA.
ACCESSION   XM_030244248
VERSION     XM_030244248.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030244248.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6226
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..6226
                     /gene="Xirp1"
                     /gene_synonym="Cmya1"
                     /note="xin actin-binding repeat containing 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 ESTs, 21 long SRA reads, 9 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 17 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:22437"
                     /db_xref="MGI:MGI:1333878"
     CDS             166..5607
                     /gene="Xirp1"
                     /gene_synonym="Cmya1"
                     /codon_start=1
                     /product="xin actin-binding repeat-containing protein 1
                     isoform X1"
                     /protein_id="XP_030100108.2"
                     /db_xref="GeneID:22437"
                     /db_xref="MGI:MGI:1333878"
                     /translation="MADAQMQVAPTPTIQMRTEEDLSLPHPSAPEGLPPPPPKETFSK
                     FQQQRQASELRRLYKHIHPELRKNLEEAVAEDLAEVLGSEEPTEGDVQCMRWIFENWR
                     LDAIGDHERPAAREPVSGGNVQATSRKFEEGSFTNSSDQEPEGLRPSGGDVQAARQMF
                     ETKPLDALRGQEEATQTTMREPAATGDVQGTRKLFETRPLDRLGSRPSIQEQSPLELR
                     SEIQELKGDVKKTVKLFQTEPLCAIQDAEGTIHEVKAACREEIQSNAVRSARWLFETR
                     PLDAFNQDPSQVRVIRGISLEEGALPDVSATRWIFETQPLDAIREIEVDEKDFQPSPD
                     LIPPGPDVQHQRHLFETCSLDTLKGERETEAEVPPKEEVIPGDVRSTLWLFETKPLDA
                     FRDQVQVGHLQRVGHQEGEGLVTECLPSNGTSVLPLSQGVPQNDGLKGDVKTFKNLFE
                     TLPLDSIGQGEPSAYGNINRGQNTDSAEQSQGSDAPVYAMQDSRGQLHALTSVSREQV
                     VGGDVQGYKWMFETQPLDTLGRSPSTIDVVRGITRQEVVAGDVGTTRWLFETQPLEMI
                     HQQEQQKPEEEEGKGPGGPPPELPKKGDVQTIRWLFETYPMSELAEKRESEVTDPVSK
                     AETQSCTWMFGPQSLNPAEGSGEQHLQTSQVPAGDRQTDRHVFETESLPASNQSSGRK
                     PVRYCSRVEIPSGQVSRQKEVFQALEAGKKEVPETTINLGSIPTGSVHKFTWLFENCP
                     MGSLAAESIRGDNLQEEQPKGSAGHGTPERQETAAERTLRTLHATPGILHHGGILMEA
                     RGPGELCLAKYVLPSPGQGRPYIRKEELVCGELPRIVRQVLRRTDVDQQGLLVQEDTA
                     GQLQLHPLTLPGPGDPGNIEDMDPELQQLLACGLGVSVSKTGLVMQETGQGLVALTAY
                     SLQPQLTSRAPERSSVQLLASCIDKGDLHSLHSLRWEPPTDPSSGPATEESQRVPPTE
                     SIIHVTPLDSTMEMGQLRISGSTPCPPPSRAAGKVVLPNGKPVAQAPLQEARKKTDIS
                     HAGQKGKAASGRPEGTIASPLGSGAPDLQEAMQNLRLATAEAQSLHQQVLSRHPQGSD
                     PVATSMPVQDVLQASTPATGVTQGSIRPVAGSEARIPAFPRKVSGDNKAVPRGLPRGW
                     VTIQDGIYAAHPVRTSDPHGAIQPSEKEPHLRHSPPQADQGQSPRPGYREPGGHTQRA
                     WEPLGKVMPQISLECLRAADTSLKTAPLTHHTLTSKPAGASLHSHNASVPPPPTLPAA
                     VTEDPDHPTQGHHQEDSIQQAPEPLQEPLLHIHNRPSGQKTPEGSETKPSKAESTMLP
                     RKKPPVPPKPAHLSQIHPPQRLPKPLAGSARASEAGQDHKPGEPGIANPGSDKAPTIA
                     GQDCLPLAESSKGQKQPAHQRPLSSMASRPSRGQITSSNSQSPESPKLNVLNNDSSPP
                     QKHNSSPQKQGTPESPQGSHQELQGLLSQVQTLEKEASRSVDVQALRKLFEGVPQLGG
                     GVPQAPTAPHMTEASMEQAFGELTRVSTEVAQLKEQTLARLLDIEEAVHKALSSMSSL
                     QSEAPTSSHPQGTTKDPSVNKVSVSSRAIQTSSSQVRDPPLVKTQEKAESHPEDKMRN
                     HAEARGQAAVNVLPSRRLETLRGAEPGLLQVSPPCTGSSSPTFISVQSATKKLPEASS
                     PQGSHYISGKNTHLGQDIGQALLYQRDIQDQAGTKEMCIEGAVLTGQPKNVLEFQTGS
                     TTSKSYGAMRTVTEQYEEMDQFGNTVLTSSTTITQHADPLTDPRPQLCLHTSPMLRQL
                     LHSPSRLNSDLAEAEITWTPCNNFHPAAQ"
ORIGIN      
        1 aaaggcagct gcctggttgg cagagaacgg agacctagag ccaaggtaga gagaggcagg
       61 ggacccagga acagaacaga actgacaaca aagaatcccg gcagagcgac agaccccaag
      121 gctagacacc caaaagcacc cagacaccag ccagaccctt gaaggatggc tgatgcccag
      181 atgcaggtag ctcctacacc aaccatccaa atgaggacag aagaggacct gtccctccct
      241 catccctcag ccccagaggg tctgccgcca ccacccccca aagaaacctt ctccaagttc
      301 cagcagcagc ggcaagccag tgagctccgg cgtctctaca aacacatcca ccctgagctt
      361 cggaagaacc tcgaggaggc tgtggctgag gacctggcgg aggtcctcgg ttcggaggag
      421 cccactgagg gcgatgttca gtgtatgcgc tggatctttg agaactggcg gctagatgcc
      481 attggcgatc acgagaggcc ggctgccagg gaacctgtgt caggtggcaa cgtccaggcc
      541 acctctcgaa agtttgagga aggctccttt accaacagct cagatcagga gccggaggga
      601 ctccggccat cagggggtga tgtccaagct gccagacaga tgtttgagac caagccactg
      661 gatgcgctga gaggccagga ggaggcaaca cagacaacca tgagggaacc tgcagccact
      721 ggagatgtac agggaaccag aaagctcttt gagactaggc ccctggaccg actgggctcc
      781 cgcccctcta tccaggagca gagtccttta gagctgcgct cagagattca ggagctgaag
      841 ggcgatgtga agaagacggt gaagctgttt cagacggaac ctctatgcgc catccaggat
      901 gccgagggca ccatccacga agtcaaggct gcctgtcggg aggagattca aagcaatgca
      961 gtgaggtctg ctcgctggct ctttgagacc cgacctctgg atgccttcaa ccaggacccc
     1021 agccaggtgc gggtgattcg ggggatctcc cttgaggagg gagccctgcc ggatgtcagt
     1081 gcaactcgtt ggatctttga gacgcagcct ttggatgcca ttcgtgagat cgaggtggac
     1141 gagaaggact tccagccatc tccggatctc atccctcctg gcccagatgt tcagcatcag
     1201 cgacatctgt ttgaaacctg ttccctggac actctgaagg gtgaaagaga aacagaggca
     1261 gaggtgccac ccaaggagga ggtgattcct ggcgatgtcc gctctacact ctggctattt
     1321 gaaacaaaac ccctggatgc tttcagagac caggtccaag tgggtcacct gcaacgggtg
     1381 ggtcaccagg agggtgaggg gcttgtgaca gagtgtctac ccagtaatgg tacttcggtg
     1441 ttgcctctgt ctcagggtgt cccccagaat gatgggttga aaggggatgt gaaaaccttc
     1501 aagaatcttt ttgagaccct tcccttagac agcattgggc agggtgagcc ttcagcctat
     1561 gggaacataa acagaggaca aaacactgat tctgccgagc agtcccaggg ttctgacgcc
     1621 ccggtatatg ctatgcagga cagcagggga cagcttcatg ccctgacttc tgtcagcaga
     1681 gagcaggtag ttggaggtga tgttcagggc tacaagtgga tgtttgagac acagcccctg
     1741 gacacgctgg gtagaagccc cagtaccatc gatgtggtac gaggtatcac tcggcaggaa
     1801 gtggtggctg gggatgtcgg caccactcgg tggctctttg agacgcagcc attggagatg
     1861 atccaccaac aagagcaaca gaaaccagag gaggaagagg ggaagggtcc aggaggcccc
     1921 ccccctgagc tccccaaaaa gggtgatgta cagactatcc gttggctgtt tgagacctac
     1981 cctatgagcg agttggcaga gaagcgagaa tctgaggtca cagaccccgt gagcaaggct
     2041 gagacacagt cctgcacctg gatgtttggg ccccaatctc tgaacccagc agaaggctct
     2101 ggggagcagc acctgcaaac cagccaggtt ccggctggag acaggcagac agacagacat
     2161 gtctttgaga ctgaatctct gccagcctca aaccaatcca gtgggagaaa gcctgtaagg
     2221 tactgcagcc gggtggagat tccttccggg caggtatctc ggcagaaaga ggttttccag
     2281 gccctggagg cgggcaagaa ggaggtcccg gagaccacaa tcaacctggg gtccatcccc
     2341 acaggctctg tgcataaatt cacctggctc tttgaaaact gtcccatggg ctccctggca
     2401 gctgagagca tcagagggga caacctccag gaagaacagc caaaaggctc tgcaggccat
     2461 gggacaccag agaggcagga gacagcagcc gagagaaccc ttcggacttt gcatgccacc
     2521 cccggcatcc tgcaccatgg aggcatcctc atggaggccc gagggccagg ggagctctgt
     2581 cttgccaagt atgtgctccc aagcccaggg caggggcgcc cctacatacg gaaggaggag
     2641 ctggtgtgtg gtgagcttcc caggatcgtc cgtcaagtgc tgcgccggac agacgtggac
     2701 cagcagggac tgctggttca ggaggacaca gctgggcagc tccagctcca cccactcacg
     2761 ctgccagggc ctggtgaccc tgggaatatt gaagacatgg accctgagct ccagcagctg
     2821 ctggcctgtg gcctgggagt ctctgtgtca aagacggggc tggtgatgca agagacagga
     2881 cagggcctag tggcactgac tgcctactcc ctccagcccc agcttaccag cagggcccct
     2941 gaaagaagca gtgtgcagct gctggccagc tgcatagaca aaggagacct gcacagcctt
     3001 cacagtttgc ggtgggagcc gccaacagac ccaagttctg gacctgctac tgaggagtcc
     3061 cagagggtcc ccccaactga gagcatcata catgttaccc cattagactc caccatggag
     3121 atggggcagc tgagaatctc aggatccaca ccctgcccac ctccatctcg ggcagctgga
     3181 aaagtggtcc ttccaaatgg gaaacctgta gcccaagctc cattgcagga agcaaggaag
     3241 aaaacggata tcagccatgc tgggcagaaa gggaaggcag cctcaggaag accagaagga
     3301 accattgctt cccctctagg gtctggggct ccagatctcc aggaagccat gcagaatctg
     3361 cgtttggcaa ccgctgaggc ccaaagcctg caccagcagg ttctgagcag gcatccacag
     3421 ggctctgacc ctgtagccac ctccatgcct gtccaagatg ttctgcaagc atccactcct
     3481 gccactgggg ttactcaagg cagcatcagg cctgtggctg gaagtgaagc caggatccca
     3541 gcattcccca gaaaggtcag tggggacaac aaagcagtcc ccagagggct gcctaggggg
     3601 tgggtgacca tacaggatgg catctacgct gctcaccctg tgagaacctc tgacccacat
     3661 ggggctatcc agccttctga aaaagagccc catctgaggc acagcccacc ccaggcagac
     3721 caaggtcaga gtcccaggcc ggggtatcgt gagcctgggg gtcatacaca aagggcttgg
     3781 gaacctctgg ggaaagtgat gccccaaatc tcgcttgagt gcctccgggc agcagacacc
     3841 tccctgaaga ctgcccctct aactcaccac accctgacat ctaaaccagc aggtgccagc
     3901 ctgcactccc ataatgcctc tgttcctccc cctcctactc tcccagctgc tgtgacagaa
     3961 gatcctgacc acccaactca aggccaccac caggaggact ccatccagca ggccccggag
     4021 cccctgcagg aaccccttct tcatattcac aacagacctt ctggccagaa aacccctgaa
     4081 gggtcagaga caaaaccctc caaagcggaa tccaccatgc ttccaagaaa gaaaccccca
     4141 gtgcctccca aacctgcaca tctaagccaa atccacccac ctcagaggct gcccaagccc
     4201 ttagcaggct ctgccagagc ctcagaagca ggacaagacc ataagccagg tgagccaggt
     4261 atagccaacc cagggtcaga caaagctccc acaatagcag gccaggactg cctgcctctg
     4321 gctgaaagct ccaagggcca gaagcaacct gctcatcagc gtccactcag ctctatggct
     4381 tccaggccta gcaggggtca gataaccagc agcaacagcc agagccccga gtctcctaag
     4441 ttgaacgttc tcaacaatga ctccagccca ccacaaaagc acaatagctc cccccaaaag
     4501 caggggaccc ctgagagtcc acagggcagc catcaggagc tccagggcct cctgagccaa
     4561 gtgcaaaccc tggagaagga agcatctcgc agcgtggatg tgcaggccct gcggaagctc
     4621 ttcgagggcg taccccagct gggaggggga gtccctcagg ctcccactgc cccccacatg
     4681 actgaggcct ccatggagca ggcctttggg gaactgactc gggtgagtac agaggttgcc
     4741 cagctgaaag aacagaccct agccaggctg ctggacatcg aagaagcagt gcacaaggct
     4801 cttagctcca tgtctagcct ccagtctgag gctcccacaa gcagccatcc acagggaact
     4861 acaaaagatc ccagtgtgaa caaggtctca gtcagtagca gagccataca gacaagctcc
     4921 agccaggtca gagatccacc cctcgtcaaa acccaagaaa aggccgagag ccatcctgag
     4981 gacaagatga gaaatcacgc agaggccaga ggccaggcag cagtgaacgt cctgccctcc
     5041 aggaggctgg agacactgag aggagccgag cctggcctcc tacaagtctc tcctccctgc
     5101 acaggatcct cctctccaac tttcatctca gtccaatcag ctacaaagaa gcttccggaa
     5161 gcttctagcc ctcagggaag ccattatatc tcagggaaaa atacacacct aggtcaggac
     5221 ataggtcaag ccctgctcta ccagagagat atccaggatc aggctgggac aaaggagatg
     5281 tgcatcgagg gcgctgtgct cacagggcag ccaaagaatg ttctggaatt ccagactggg
     5341 tcaactacct ccaagtccta tggagccatg agaacagtga ccgagcagta tgaggagatg
     5401 gaccaatttg ggaatacagt cctcacttcc tccaccacca tcacccagca cgcagaccca
     5461 ctgacggacc ccagacccca gctctgcctg cacacttctc ccatgctaag gcagttactc
     5521 cacagcccct ccaggctcaa cagtgacctg gcagaagctg agataacatg gactccctgt
     5581 aacaacttcc acccggctgc ccagtgagcc cctctgtctc ccaccagtct tgggtacctc
     5641 tcccagagct cccccaggac tgagtcatgg gcctacctcc agcacatgtg gaacaaggac
     5701 caagaaaaaa acgtggcctt cagagagctc acgagggctg tttgccttgt tagttcttgg
     5761 aaaagaggca agaaacataa agcagccatc cacaggaaag ccggatggga gggacaggac
     5821 ctgacaggtg cttgtggaga actagcccac actagcccag ctcacactca cacatgtgag
     5881 cctgcacctc attgcctaga gctggagggt caccctgcac tgtgtccctc catagccagc
     5941 ctttttcttt ggttatggaa tctggctgcc ttaatccctg gtgaggaccc ggggctgagc
     6001 aaactggaca tgacactgct ctctgtttga gattggacta aaggctccag aaaaacccgg
     6061 gtgcctgcct cttcatcgcc agtggtccaa agggcgcaga gagcgcacta gcagtcaata
     6121 gtgttccgag aagctgaata cacgaccctt cctgacccca tcacccccac tctgcacccc
     6181 gaatgggaaa aaatgaccca aaaataaacc caaaagagat tcccta
//
