LOCUS       XM_036154251            2672 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus XPA binding protein 2 (Xab2), transcript
            variant X3, mRNA.
ACCESSION   XM_036154251
VERSION     XM_036154251.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000074.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2672
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="8"
     gene            1..2672
                     /gene="Xab2"
                     /gene_synonym="0610041O14Rik"
                     /note="XPA binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     mRNAs, 56 ESTs, 540 long SRA reads, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 33 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:67439"
                     /db_xref="MGI:MGI:1914689"
     CDS             1239..2603
                     /gene="Xab2"
                     /gene_synonym="0610041O14Rik"
                     /codon_start=1
                     /product="pre-mRNA-splicing factor SYF1 isoform X3"
                     /protein_id="XP_036010144.1"
                     /db_xref="GeneID:67439"
                     /db_xref="MGI:MGI:1914689"
                     /translation="MDSWMILCPLPQARVILEKATKVNFKQVDDLASVWCQCGELELR
                     HENYDEALKLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQST
                     KAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYL
                     TKFISRYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYDRA
                     TRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECK
                     LGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQATYN
                     TQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPPRAQS
                     KIFFVRSDASREELAELAQQANPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFGS
                     LKED"
ORIGIN      
        1 ctggagagcc aggaagatgg tggtgatggc gcgagttccg cgttccgagc ggccggacct
       61 tgtttttgag gaagaggacc ttccctatga ggaagaaatc atgaggaacc agttctccgt
      121 caaatgctgg ctccgctaca tcgagttcaa acagggggcc cccaagcccc gactcaacca
      181 gttgtatgag cgggcactca aactgcttcc ctgcagctac aaactctggt accgatatct
      241 gaaggcacgc cgggcacagg tgaaacatcg ctgtgtgact gatcctgcct atgaagatgt
      301 caacaactgc catgagaggg cctttgtgtt catgcacaag atgccacgcc tgtggttaga
      361 ctactgccag tttctcatgg accagggaag ggtaacacat acccgccgca cctttgaccg
      421 tgccctcagg gcactgccca tcacacaaca ctctcgcatc tggcccctgt atctacgttt
      481 cctgcgctcc cacccactgc ctgagactgc tgtgcgaggc taccgtcgct tcctcaagct
      541 gagtcctgag agcgctgagg aatacatcga gtatctcaaa tccagtgacc ggctagacga
      601 ggctgcacag cgcctggcca ccgtggtgaa tgatgagcgc tttgtatcca aggctggtaa
      661 atccaactac cagctgtggc acgagctgtg tgaccttatc tcccagaatc cggacaaggt
      721 acagtctctc aatgtggatg ccataatccg tggtgggctc acccgtttca ctgaccagct
      781 gggcaagctg tggtgctctt tggcagacta ctatatccgc agtggccact tcgaaaaggc
      841 tcgggatgtg tatgaggagg ccatccgcac ggtgatgacc gtgcgggact tcacccaggt
      901 gttcgacagc tacgcccagt ttgaggagag catgattgca gcgaagatgg agactgcctc
      961 tgaactgggg cgtgaggagg aggacgatgt ggacctagag ctgcgcctgg cccgcttcga
     1021 acagctcatc agccgacggc ccctgcttct caatagtgtc cttctgcgcc agaacccaca
     1081 ccacgtccac gagtggcaca agcgtgtagc cctccatcag ggccgccctc gggagattat
     1141 caacacatac acagaggctg tgcaaacagt agaccccttc aaagccacag gcaagcccca
     1201 cacactgtgg gttgcattcg ccaagtttta cgaagacaat ggacagctgg atgattctct
     1261 gcccattacc acaggctcgt gtcatcctag agaaggccac caaggtgaac ttcaagcagg
     1321 tggatgacct ggcaagtgtg tggtgccagt gtggggagct agagctcagg cacgagaatt
     1381 acgatgaggc cttaaagctg ctgcggaaag ccacggcttt gcctgcccgc cgagctgagt
     1441 actttgatgg ttcagaacct gtgcagaacc gtgtatataa gtcgctgaag gtgtggtcca
     1501 tgcttgccga cttggaggaa agcctgggca ctttccagtc aaccaaggcc gtgtatgacc
     1561 gaatcctgga cctgcgcata gccacgccac agatcgttat taactatgcc atgttcctgg
     1621 aggagcacaa gtactttgag gagagcttca aggcatatga gcgtggcatc tcactgttca
     1681 agtggcccaa tgtttcagac atctggagca cctacctgac caaattcatc tcgcgctatg
     1741 ggggccgaaa gctggagcgt gcacgggatc tctttgagca ggcactcgat ggctgcccac
     1801 caaaatatgc caagacttta tacctgctct acgcacagct ggaggaggag tggggccttg
     1861 cccgccatgc catggctgtg tatgaccgtg cgaccagggc agtggagcca gcacagcagt
     1921 acgacatgtt taacatctac atcaagcgag ctgctgagat ctatggcgtc acccacactc
     1981 gtggcatcta ccagaaggcc attgaggtgc tgtctgatga gcatgcccgt gagatgtgcc
     2041 tgcggtttgc agacatggag tgcaagctcg gtgaaatcga ccgcgcccgg gccatctaca
     2101 gcttctgctc ccagatctgt gatccccgga caactggggc attctggcaa acatggaagg
     2161 actttgaggt tcggcacggc aatgaggata ccatcaggga gatgctgagg atacggcgga
     2221 gtgtgcaggc cacatacaat actcaggtca acttcatggc ttcacagatg ctcaaggtgt
     2281 cgggcagtgc cacaggcacc gtgtctgacc tggctcctgg gcagagtggc atggatgaca
     2341 tgaagctgct ggaacagaga gcagaacagc tggcagctga ggcggagcgg gaccagcccc
     2401 ccagggccca gagcaagatc ttctttgtga ggagtgatgc atccagggag gaattggcag
     2461 agctggctca gcaggccaac cctgaggaga tccagctggg cgaggatgag gacgaggacg
     2521 agatggacct ggagcccaat gaagtccgac tggaacagca gagtgtacca gctgctgtgt
     2581 tcgggagcct aaaggaagac tgactccctc cacacttttt cttccatggt cactccccca
     2641 taactaccct tctaatacat cccctctttg ta
//
