LOCUS       NM_028599               2992 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus WD repeat domain 75 (Wdr75), mRNA.
ACCESSION   NM_028599 XM_129726 XM_899911 XM_899923 XM_899929 XM_899935
            XM_899942 XM_899949 XM_905443 XM_919350 XM_919365 XM_919374
            XM_919385 XM_919393 XM_919402
VERSION     NM_028599.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2992)
  AUTHORS   Vrljicak,P., Cullum,R., Xu,E., Chang,A.C., Wederell,E.D.,
            Bilenky,M., Jones,S.J., Marra,M.A., Karsan,A. and Hoodless,P.A.
  TITLE     Twist1 transcriptional targets in the developing atrio-ventricular
            canal of the mouse
  JOURNAL   PLoS One 7 (7), e40815 (2012)
   PUBMED   22815831
REFERENCE   2  (bases 1 to 2992)
  AUTHORS   Hoffman,B.G., Zavaglia,B., Witzsche,J., Ruiz de Algara,T.,
            Beach,M., Hoodless,P.A., Jones,S.J., Marra,M.A. and Helgason,C.D.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
REFERENCE   3  (bases 1 to 2992)
  AUTHORS   Evsikov,A.V., Graber,J.H., Brockman,J.M., Hampl,A., Holbrook,A.E.,
            Singh,P., Eppig,J.J., Solter,D. and Knowles,B.B.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
REFERENCE   4  (bases 1 to 2992)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   5  (bases 1 to 2992)
  AUTHORS   Piao,Y., Ko,N.T., Lim,M.K. and Ko,M.S.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
REFERENCE   6  (bases 1 to 2992)
  AUTHORS   Nishiguchi,S., Joh,T., Horie,K., Zou,Z., Yasunaga,T. and Shimada,K.
  TITLE     A survey of genes expressed in undifferentiated mouse embryonal
            carcinoma F9 cells: characterization of low-abundance mRNAs
  JOURNAL   J Biochem 116 (1), 128-139 (1994)
   PUBMED   7798170
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CD541304.1, AK152412.1, AK163221.1 and DV648013.1.
            
            On Sep 28, 2017 this sequence version replaced NM_028599.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085177.1, AK152412.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-335               CD541304.1         1-335
            336-2947            AK152412.1         2-2613
            2948-2969           AK163221.1         2587-2608
            2970-2992           DV648013.1         678-700
FEATURES             Location/Qualifiers
     source          1..2992
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 23.87 cM"
     gene            1..2992
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /note="WD repeat domain 75"
                     /db_xref="GeneID:73674"
                     /db_xref="MGI:MGI:1920924"
     exon            1..439
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             357..2849
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /note="U3 small nucleolar RNA-associated protein 17
                     homolog"
                     /codon_start=1
                     /product="WD repeat-containing protein 75"
                     /protein_id="NP_082875.1"
                     /db_xref="CCDS:CCDS14932.1"
                     /db_xref="GeneID:73674"
                     /db_xref="MGI:MGI:1920924"
                     /translation="MVEEGVRVVRCGGSRLNFRRAVFSVDSKYIFCVSGDFVKVYSTT
                     TEECVHILHGHTDLVSGILVNPSNHLQLYSCSFDGTIKLWDYVDGILIKTFTIGPKLH
                     AFFIPLHAEDSVFLTISKEEPDIFQLVSVKLPKSTSQDVEARQLTFVLDYINRSPKCI
                     AFGNEGEYVAAVRDFYLSVYFFKKKKTCNFTLPSTKNKKNAKNKFTCVACHPKEDCIA
                     SGHMDGKIRLWRNFHSDQKYTYTCLHWHHDMVMDLAFTVTGTSLLSGGRECVLVEWRD
                     GSEKNKEFLPRLGSSIEHISVSPAGDLFCTSHSDNKITVIHRNLDASAVIQGLVKDRS
                     ISTGLMVDPRTKALVLNGKPGHLQFYSLQGDKQLYNLDIIQQEYINDEGLTQTELTKA
                     AFGCSGTWLATVEQRQENENELELQMKLWNYSKKTQGFVLNTKIAMPHDDHITALCFN
                     NAESYEKPILVTASRDGHFKVWILTDDSDIYKKAIAWTCDFVGSYHKYQATNCCFSED
                     GSLLAVSFEEIVTIWDSQTWELKCTFCQRAGKIRHLCFGRLTCSKYLLGTTDNGILCC
                     WNLLSCSIQWSAKLNVRVMEPDPYSDHVAAVAQSSAGSDLFVFKPSEPRPLYIQKNVS
                     REEVQWGVFVPRDVPESFTSETHQWLNRSQFYFLTKSQSLLTFSTKSPEEKLTPTSKQ
                     LLAEESLPTTPFSFILGKHRQQQGAKLTETSENELVQLPLTENIPAITELLHTPAHVL
                     PSASFLCSLFVNSLLLSKETKSAEEVPDDVDMEGNKESDDSDEEYDLTEKDKETNNNT
                     DLGEDAIHQLSKSEEKELRKFRKVDYSWLTAL"
     exon            440..569
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            570..635
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            636..726
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            727..851
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            852..922
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            923..1042
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1043..1131
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1132..1290
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1291..1350
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1351..1466
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1467..1642
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1643..1800
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1801..1981
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1982..2076
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2077..2172
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2173..2342
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2343..2402
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2403..2549
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2550..2641
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2642..2972
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      2953
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /note="major polyA site"
     regulatory      2955..2960
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Wdr75"
                     /gene_synonym="1300003A18Rik; 2410118I19Rik"
                     /note="hexamer: ATTAAA"
ORIGIN      
        1 cagaaaaggc aacggcttca gtaggagaaa ggatgttcac ttccgcttct ggcggaacct
       61 ttagagtccg gtaaaagagg ccgaagagaa aactctcttc tgtatcgaat agctgtagcg
      121 gcatctggta tgatttaact ttgtgcgtgg ctgttgggct ttactccttc tacaagggtt
      181 ttaatttgac cctgcccaaa ctaaagatgg cggcgtaggc gtggagccga ccatagagtc
      241 tccaggctag agaggcccag gcgggccgcg ggcggaagag tagggccagg ccagtcggcc
      301 tatgaaggaa gttcgtaatc cggccggtgc tcggtgcttc ctgcgcctgc gtgaagatgg
      361 tagaagaggg agtccgcgtg gttcgctgcg gcggcagccg gctgaacttc aggagggccg
      421 tgttctccgt ggattccaag tatatcttct gtgtctcggg agactttgtc aaggtctata
      481 gcacgaccac agaagagtgt gtgcacattc tgcatgggca cacagatctg gtgtctggaa
      541 tcctcgtcaa ccccagcaac catctgcagc tctactcttg ttcctttgat ggcacaatta
      601 agctgtggga ctatgttgat ggcattctga taaagacttt cactattgga cctaaactcc
      661 acgccttctt tattcctctc cacgcggaag attccgtctt ccttacaata agtaaagaag
      721 agccagatat atttcagctg gtgtcagtga agctgcccaa atcaacaagc caggacgtgg
      781 aagctagaca gctcaccttt gttttggatt acataaatag gtcccccaag tgcattgcct
      841 ttggaaatga gggagaatac gttgctgcag tccgggactt ttacttatct gtttattttt
      901 tcaaaaagaa aaaaacatgc aattttactt taccatcaac aaaaaacaag aagaatgcaa
      961 agaacaagtt cacatgtgta gcctgccacc cgaaggaaga ttgcattgca tctggtcaca
     1021 tggacggcaa aatccgcctt tggaggaact ttcacagtga tcagaagtac acatacacat
     1081 gtttgcattg gcaccacgac atggttatgg atttggcgtt cacagtaaca ggcaccagtc
     1141 tgctgagtgg cgggcgggag tgtgtgcttg tggagtggcg agatggatca gagaagaaca
     1201 aagagtttct tcctcgatta ggatcttcta ttgagcacat ctctgtctca cctgcaggag
     1261 atttgttctg tacttctcac tctgataaca agataacagt tattcaccga aatcttgatg
     1321 catcggcagt aattcaaggc ctagttaaag ataggagtat atctactggt ttgatggttg
     1381 acccaagaac caaagcttta gttttgaatg gaaagcctgg tcacctgcag ttttattctc
     1441 tccagggtga taagcagtta tacaatctag atatcataca gcaagagtac atcaatgatg
     1501 agggtctaac ccaaactgaa ctaacaaagg ctgcctttgg ctgctctggg acttggttgg
     1561 caacagttga acaacgccaa gaaaatgaaa atgagctgga gctgcaaatg aaactgtgga
     1621 actatagcaa gaaaacccaa gggtttgttc ttaacacaaa gatcgccatg ccacatgatg
     1681 accacatcac agctctctgt ttcaataatg cagaaagcta tgaaaaaccc atcctggtca
     1741 cagctagcag agatggccac ttcaaagtgt ggatattaac agatgactct gacatataca
     1801 aaaaagccat tgcttggact tgtgactttg tgggtagtta ccacaagtat caagcaacca
     1861 attgttgttt ctctgaagat ggttccttac tggcagttag ttttgaggaa atagttacaa
     1921 tatgggactc acaaacatgg gaactaaaat gtacattttg ccaacgagct gggaaaataa
     1981 ggcacctttg ctttggaaga ctgacatgct caaagtatct cctcggcact actgacaatg
     2041 gcattctctg ctgttggaat ctgctcagtt gttcaataca gtggagtgca aagttgaatg
     2101 ttagagttat ggaacccgac ccttactcag accatgttgc tgcagtggct cagtcttcag
     2161 cgggctccga tctgtttgta tttaaaccta gcgagccaag gccattgtat attcagaaga
     2221 atgtctccag agaggaagtc cagtggggag tgtttgtccc acgagatgtc ccagaatcat
     2281 tcacgtcaga aacgcaccag tggctgaaca gatctcagtt ttacttccta acgaagtcac
     2341 agagcttatt aacattcagt acaaagtctc cagaagagaa actcacacca acaagcaaac
     2401 agctgctggc agaagaaagt ttgccaacga ccccattttc tttcatattg ggaaaacaca
     2461 ggcaacagca gggtgcaaag ttaacagaaa cttcagagaa tgaactggta caactcccct
     2521 taacagagaa catacctgca attactgagc ttcttcacac cccagcccat gtcctgccat
     2581 cagcttcttt cttgtgctct ctgtttgtaa actcgctgct gctgtctaaa gagactaaaa
     2641 gtgctgaaga ggttcctgat gatgtagata tggagggaaa caaagaaagt gatgattcag
     2701 atgaagagta tgatcttact gaaaaagaca aggaaacaaa taacaacacg gacttgggag
     2761 aagatgctat acatcagctg tcaaaatctg aagagaagga gctgagaaag ttcagaaaag
     2821 tagattatag ctggctaact gctctgtagt aggccatggc tgtgccatga caaagagaca
     2881 tgttgtactt aatgtttact gtctgttaat actccaaaaa tttttataaa gttattttat
     2941 tcttaagaca aaatattaaa gccttgtgtt taaaaaaaaa aaaaaaaaaa aa
//
