LOCUS       NM_026464               1515 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus WD repeat domain 55 (Wdr55), transcript variant 1,
            mRNA.
ACCESSION   NM_026464
VERSION     NM_026464.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Iwanami,N., Higuchi,T., Sasano,Y., Fujiwara,T., Hoa,V.Q., Okada,M.,
            Talukder,S.R., Kunimatsu,S., Li,J., Saito,F., Bhattacharya,C.,
            Matin,A., Sasaki,T., Shimizu,N., Mitani,H., Himmelbauer,H.,
            Momoi,A., Kondoh,H., Furutani-Seiki,M. and Takahama,Y.
  TITLE     WDR55 is a nucleolar modulator of ribosomal RNA synthesis, cell
            cycle progression, and teleost organ development
  JOURNAL   PLoS Genet 4 (8), e1000171 (2008)
   PUBMED   18769712
  REMARK    Erratum:[PLoS Genet. 2008 Sep;4(9). doi:
            10.1371/annotation/6683988c-4647-4550-88e3-e8ba052f7916]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Youngren,K.K., Coveney,D., Peng,X., Bhattacharya,C., Schmidt,L.S.,
            Nickerson,M.L., Lamb,B.T., Deng,J.M., Behringer,R.R., Capel,B.,
            Rubin,E.M., Nadeau,J.H. and Matin,A.
  TITLE     The Ter mutation in the dead end gene causes germ cell loss and
            testicular germ cell tumours
  JOURNAL   Nature 435 (7040), 360-364 (2005)
   PUBMED   15902260
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC027740.11.
            
            On Mar 13, 2018 this sequence version replaced NM_026464.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK075958.1, AK146093.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-259               AC027740.11        216769-217027
            260-360             AC027740.11        218524-218624
            361-448             AC027740.11        218713-218800
            449-628             AC027740.11        218902-219081
            629-728             AC027740.11        219205-219304
            729-898             AC027740.11        219396-219565
            899-1515            AC027740.11        219639-220255
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 19.46 cM"
     gene            1..1515
                     /gene="Wdr55"
                     /gene_synonym="2410080P20Rik"
                     /note="WD repeat domain 55"
                     /db_xref="GeneID:67936"
                     /db_xref="MGI:MGI:1915186"
     exon            1..259
                     /gene="Wdr55"
                     /gene_synonym="2410080P20Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             66..1232
                     /gene="Wdr55"
                     /gene_synonym="2410080P20Rik"
                     /codon_start=1
                     /product="WD repeat-containing protein 55"
                     /protein_id="NP_080740.2"
                     /db_xref="CCDS:CCDS29162.1"
                     /db_xref="GeneID:67936"
                     /db_xref="MGI:MGI:1915186"
                     /translation="MDPTCEESPAEDSNNEEEDLDSTKAAPRIRDTPEDIVLEAPASG
                     LAFHPTRDLLAAGDVDGDVFVFAYSCQEGETKELWSSGHHLKSCRAVVFSEDGQKLVT
                     VSKDKAIHILDVEQGQLERRISKAHSAPINSVLLVDENALVTGDDTGGIRLWDQRKEG
                     PLMDMRQHEEYIADMALDPAKKLLLTASGDGCLGVFNIKRRRFELLSEPQSGDLTSVA
                     LMKYGKKVACGSSEGTIYLFNWNGFGATSDRFALRAESIDCIVPVTENLLCTGSTDGI
                     IRAVNILPNRVVGTVGQHAGEPVEALALSHCGHFLASSGHDQRLKFWDMTQLRTVVVD
                     DYRRRKKKGGPLRALSSKAWSTDDFFAGLREDEEDAKAPEEVVRESDDDDDDSD"
     exon            260..360
                     /gene="Wdr55"
                     /gene_synonym="2410080P20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            361..448
                     /gene="Wdr55"
                     /gene_synonym="2410080P20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            449..628
                     /gene="Wdr55"
                     /gene_synonym="2410080P20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            629..728
                     /gene="Wdr55"
                     /gene_synonym="2410080P20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            729..898
                     /gene="Wdr55"
                     /gene_synonym="2410080P20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            899..1515
                     /gene="Wdr55"
                     /gene_synonym="2410080P20Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1333
                     /gene="Wdr55"
                     /gene_synonym="2410080P20Rik"
ORIGIN      
        1 cccggaagca actgcttagg ccacgcccct gtccatgaag ttggtcccaa gcgcgcgtgg
       61 atcctatgga ccccacgtgt gaagagagtc ctgcagagga ctcaaacaat gaagaggaag
      121 accttgactc cacgaaggca gcaccccgga tccgtgatac cccagaagac atcgtgctgg
      181 aagccccagc cagtggcctg gcgttccatc cgactcgaga tctgctggca gcaggggacg
      241 tggacggaga tgtgttcgtc tttgcctact cttgtcagga gggagaaacc aaggaactct
      301 ggtcctcagg acaccacctc aagtcctgcc gggctgttgt cttctcagag gatgggcaga
      361 aacttgttac cgtctctaag gacaaagcaa tccacatctt agatgtcgaa cagggacaat
      421 tggaaaggcg aatttccaag gcccacagtg cccccattaa cagtgtgctg cttgtggatg
      481 agaatgctct ggttacgggg gacgacactg gtggcatccg gctatgggac cagcgtaaag
      541 agggcccttt gatggatatg cggcagcatg aggagtacat tgccgacatg gctctagacc
      601 cagccaaaaa gctgctgctg acagccagtg gggatggctg ccttggtgtc ttcaacatca
      661 agagacgccg gtttgagtta ctctcagagc ctcagtcagg agatctaacc tccgtcgccc
      721 tcatgaaata cgggaagaag gtggcctgtg gatctagcga ggggaccatc tacctcttca
      781 actggaatgg ttttggggct acaagtgacc gctttgccct gagagcagag tccatcgact
      841 gcatagttcc agtcactgag aatctgttgt gcactggctc cacggatgga atcatcaggg
      901 ctgtgaacat cctgccaaac cgagtggtag gtaccgtggg ccagcatgcc ggggagcctg
      961 tggaggcgct agccctatcc cattgcggcc actttctggc cagtagtggc cacgaccagc
     1021 gcctcaagtt ttgggacatg actcagcttc gaaccgtggt tgtggatgac tatcggcgac
     1081 gcaagaaaaa gggagggccg cttcgtgccc tgagcagtaa ggcttggagc acggacgact
     1141 tctttgcagg gttgagggaa gatgaagagg atgccaaggc tccagaggag gtggtgaggg
     1201 agagcgatga cgatgacgac gacagtgact gagggaggga caaggagctg ttttctggga
     1261 cagatttccc caaagaactc tgttgatgct gtagattgaa cctaccacct tgaacatgat
     1321 cagctcagct ctaccactga ttatctatat tctgtgtcat gtaagaaatg acatgaactc
     1381 agggccccga agaagggaag tatttgctcc ccctatcatt gtaaaacaaa ctctatgacc
     1441 actacagcaa gacacatgta taccaagcag acacatgtat accaactggg gttttaatat
     1501 aaataaaacc agtat
//
