LOCUS       NM_023597               2454 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus WD repeat domain 31 (Wdr31), transcript variant 2,
            mRNA.
ACCESSION   NM_023597
VERSION     NM_023597.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2454)
  AUTHORS   Catalano,R.D., Vlad,M. and Kennedy,R.C.
  TITLE     Differential display to identify and isolate novel genes expressed
            during spermatogenesis
  JOURNAL   Mol Hum Reprod 3 (3), 215-221 (1997)
   PUBMED   9237247
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL732594.5, CK618879.1, AK017259.1 and AK141026.1.
            
            On Sep 19, 2017 this sequence version replaced NM_023597.2.
            
            Transcript Variant: This variant (2) differs in the 5' UTR,
            compared to variant 1. Variants 1 and 2 encode the same isoform
            (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.1950340.1, AF274321.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4                 AL732594.5         63551-63554         c
            5-12                CK618879.1         1-8
            13-321              AK017259.1         2-310
            322-324             AK141026.1         423-425
            325-1083            AK017259.1         311-1069
            1084-1645           AK141026.1         1185-1746
            1646-2454           AL732594.5         45287-46095         c
FEATURES             Location/Qualifiers
     source          1..2454
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 33.14 cM"
     gene            1..2454
                     /gene="Wdr31"
                     /gene_synonym="5430402I10Rik; spWD"
                     /note="WD repeat domain 31"
                     /db_xref="GeneID:71354"
                     /db_xref="MGI:MGI:1918604"
     exon            1..81
                     /gene="Wdr31"
                     /gene_synonym="5430402I10Rik; spWD"
                     /inference="alignment:Splign:2.1.0"
     exon            82..178
                     /gene="Wdr31"
                     /gene_synonym="5430402I10Rik; spWD"
                     /inference="alignment:Splign:2.1.0"
     exon            179..321
                     /gene="Wdr31"
                     /gene_synonym="5430402I10Rik; spWD"
                     /inference="alignment:Splign:2.1.0"
     CDS             206..1309
                     /gene="Wdr31"
                     /gene_synonym="5430402I10Rik; spWD"
                     /note="isoform 1 is encoded by transcript variant 2;
                     spermatid WD-repeat protein; WD repeat-containing protein
                     31; spermatid WD repeat-containing protein"
                     /codon_start=1
                     /product="WD repeat-containing protein 31 isoform 1"
                     /protein_id="NP_076086.1"
                     /db_xref="CCDS:CCDS18240.1"
                     /db_xref="GeneID:71354"
                     /db_xref="MGI:MGI:1918604"
                     /translation="MLLLDGQLKPALPQKVFCRLWAVMGKLQSKLRHSTYLYSRPDGI
                     IEERVQTKAPQEYIPVHVDTVSVIATLNSDLCISGGKDKTAVAYNWKTGRMVKRFTGH
                     EREITKIACIPKANQFFSASRDKTVLMWDLQGSSHPRQQLSGHAMVVTGLAVSPDSSQ
                     LCTGSRDNSLLLWDVGTGQCVERASVSRNLVTHLCWVPSEPYIVQTSEDKTIRLWDSR
                     GLQMAHMFPTKQHIQTHCEVSVDGHTCISCSSGFGGEGCEATLWDLRQTRDRMCEYKG
                     HFQTVASCVFLPKSTALMPMIATSAHDSKVKIWNQDTGACLSTLSLDGSGPLTSLAVG
                     DISSLLCASFYRGVHLLRVDHSQGLELQEVAAF"
     exon            322..454
                     /gene="Wdr31"
                     /gene_synonym="5430402I10Rik; spWD"
                     /inference="alignment:Splign:2.1.0"
     exon            455..529
                     /gene="Wdr31"
                     /gene_synonym="5430402I10Rik; spWD"
                     /inference="alignment:Splign:2.1.0"
     exon            530..674
                     /gene="Wdr31"
                     /gene_synonym="5430402I10Rik; spWD"
                     /inference="alignment:Splign:2.1.0"
     exon            675..775
                     /gene="Wdr31"
                     /gene_synonym="5430402I10Rik; spWD"
                     /inference="alignment:Splign:2.1.0"
     exon            776..843
                     /gene="Wdr31"
                     /gene_synonym="5430402I10Rik; spWD"
                     /inference="alignment:Splign:2.1.0"
     exon            844..985
                     /gene="Wdr31"
                     /gene_synonym="5430402I10Rik; spWD"
                     /inference="alignment:Splign:2.1.0"
     exon            986..1148
                     /gene="Wdr31"
                     /gene_synonym="5430402I10Rik; spWD"
                     /inference="alignment:Splign:2.1.0"
     exon            1149..2454
                     /gene="Wdr31"
                     /gene_synonym="5430402I10Rik; spWD"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1352
                     /gene="Wdr31"
                     /gene_synonym="5430402I10Rik; spWD"
                     /note="major polyA site"
ORIGIN      
        1 gctaggggcg gaggcgcggg aacctgtgga agctaaggat gcctgctacc cgtgctttcg
       61 ggcctcggtg ctagcccacc gagattagga agtggctgtc tgacttgttt ccgaaggctg
      121 aatgaactac agatcatcaa atacagcagc tcaccaagaa gatctggttg ctttgggggg
      181 aacaccccct cagcgcctgt gagggatgtt gttacttgac ggccaactga aaccagctct
      241 tcctcagaag gtcttctgta gactctgggc tgtgatggga aaactgcaga gcaaactcag
      301 acacagcact tacttataca gcaggcctga tggaattata gaagagagag tccagactaa
      361 agctccccaa gaatacatcc ctgttcacgt ggataccgtc tctgtgattg ccactctgaa
      421 ctcagacctt tgtatctctg gaggaaaaga caagaccgcc gtggcctaca attggaaaac
      481 tgggcgtatg gtgaaaaggt tcacagggca cgagcgggaa atcacgaaga tagcctgtat
      541 tcccaaagca aaccagttct tcagcgcctc tcgagacaag acagtcctga tgtgggatct
      601 gcagggctcc tcgcacccta ggcagcagct gtctggccat gccatggtgg tcactggctt
      661 ggctgtgagc ccagactcgt cccagctgtg cactggctct cgggacaata gcctgcttct
      721 gtgggatgtg gggaccggac agtgtgtgga gagagcgtct gtctccagga acctggtcac
      781 acacctgtgc tgggtcccga gtgagccata catagtccag acctctgagg ataagaccat
      841 cagattatgg gacagtcggg ggcttcagat ggctcacatg tttcccacaa aacagcatat
      901 ccagacccat tgtgaagtca gcgtggatgg acacacgtgt atttcctgca gcagtggctt
      961 tgggggtgaa ggctgtgaag ccacgttgtg ggacctaaga cagactagag acagaatgtg
     1021 tgagtataag gggcatttcc agacagttgc atcctgtgtc tttctaccga agtccacggc
     1081 cttgatgcct atgattgcta cctctgcaca tgactccaag gtgaagattt ggaaccagga
     1141 tactggagct tgcctctcca ccttgtctct ggatggatca ggacccctga cctcactggc
     1201 tgttggtgac atctcctcct tgttatgcgc aagtttctac agaggagttc acttactcag
     1261 agtggaccac agccaaggac tggaactgca ggaagtggca gccttctaaa atcaagagat
     1321 attgattgga taatatcaaa ccatggtccc tctttctgtg tggctttgtg tttttccaca
     1381 tgatcttcgg gggggggggt ggttagagtt ggtgttcttt tcttagcttt acttcgaagg
     1441 cgtatcattg ttagatgatt tgaaaaatca gggtatttgt ttgtacaagt ctcactccat
     1501 agccattaag ttccctaact tatggatctg tgaactctgg aatgacaaag gagtagtgca
     1561 agaggatgct actcatccat cctacagagg gctaagtaga gtctccctaa aagtcccagt
     1621 gatgttccca ttccacagat gggaaagcta gggcccagag agaggcatgc attattttgt
     1681 ccacacagga agggaagagc tgagatttga atctgggtct gcctgacttg gagctgggaa
     1741 gtcttcctcc ccagtctttg cctttgttgt tttagacact tagagaccat aacaatgttt
     1801 atttattttt gagactaatt attaatctag ttctggagat tggattcagg atgttgtttc
     1861 tgcaagccag gagctctgcc actgagcttt cccctaccct tgcattaagt ttagactctg
     1921 gggacatctg aggctgtagg caggtctcct tttagggcag cgaaatgcct agcgtgtgct
     1981 ggatgcatgc ggtgctgcag ctgatagttt cttgtagaag gagacagtaa gtcaaataaa
     2041 tggagggggt tgctctggtg agtcaagagg gctctgcacc gttcccactc tttcctgagc
     2101 cctgccatgt gcctgagaag cagaaagacg agcgtgtgct cacgttgatg gaacctttta
     2161 aaagttctag cctggtctac aaagtggact ccaggatagc cagggctaca tggaaaaaaa
     2221 aactctcaaa caaaacaaaa agttatgtta gagccaggca gtggtgttgc atgattttaa
     2281 tcccagcatt cagaaagaca ggcagatctc tgagttcaag gctagtctgg tgtgcaaagt
     2341 gagttccagg acagtgaggg ctgcacagag aaactctgtc ttggaaaaaa aagaagaaga
     2401 aaagaaaaaa aaattaaggg gataacattt gaaatgtaaa taaagaaaat atcc
//
