LOCUS       NM_175173               2759 bp    mRNA    linear   ROD 04-FEB-2024
DEFINITION  Mus musculus WD repeat domain 27 (Wdr27), mRNA.
ACCESSION   NM_175173
VERSION     NM_175173.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2759)
  AUTHORS   Katayama,S., Tomaru,Y., Kasukawa,T., Waki,K., Nakanishi,M.,
            Nakamura,M., Nishida,H., Yap,C.C., Suzuki,M., Kawai,J., Suzuki,H.,
            Carninci,P., Hayashizaki,Y., Wells,C., Frith,M., Ravasi,T.,
            Pang,K.C., Hallinan,J., Mattick,J., Hume,D.A., Lipovich,L.,
            Batalov,S., Engstrom,P.G., Mizuno,Y., Faghihi,M.A., Sandelin,A.,
            Chalk,A.M., Mottagui-Tabar,S., Liang,Z., Lenhard,B. and
            Wahlestedt,C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   2  (bases 1 to 2759)
  AUTHORS   Carninci,P., Kasukawa,T., Katayama,S., Gough,J., Frith,M.C.,
            Maeda,N., Oyama,R., Ravasi,T., Lenhard,B., Wells,C., Kodzius,R.,
            Shimokawa,K., Bajic,V.B., Brenner,S.E., Batalov,S., Forrest,A.R.,
            Zavolan,M., Davis,M.J., Wilming,L.G., Aidinis,V., Allen,J.E.,
            Ambesi-Impiombato,A., Apweiler,R., Aturaliya,R.N., Bailey,T.L.,
            Bansal,M., Baxter,L., Beisel,K.W., Bersano,T., Bono,H., Chalk,A.M.,
            Chiu,K.P., Choudhary,V., Christoffels,A., Clutterbuck,D.R.,
            Crowe,M.L., Dalla,E., Dalrymple,B.P., de Bono,B., Della Gatta,G.,
            di Bernardo,D., Down,T., Engstrom,P., Fagiolini,M., Faulkner,G.,
            Fletcher,C.F., Fukushima,T., Furuno,M., Futaki,S., Gariboldi,M.,
            Georgii-Hemming,P., Gingeras,T.R., Gojobori,T., Green,R.E.,
            Gustincich,S., Harbers,M., Hayashi,Y., Hensch,T.K., Hirokawa,N.,
            Hill,D., Huminiecki,L., Iacono,M., Ikeo,K., Iwama,A., Ishikawa,T.,
            Jakt,M., Kanapin,A., Katoh,M., Kawasawa,Y., Kelso,J., Kitamura,H.,
            Kitano,H., Kollias,G., Krishnan,S.P., Kruger,A., Kummerfeld,S.K.,
            Kurochkin,I.V., Lareau,L.F., Lazarevic,D., Lipovich,L., Liu,J.,
            Liuni,S., McWilliam,S., Madan Babu,M., Madera,M., Marchionni,L.,
            Matsuda,H., Matsuzawa,S., Miki,H., Mignone,F., Miyake,S.,
            Morris,K., Mottagui-Tabar,S., Mulder,N., Nakano,N., Nakauchi,H.,
            Ng,P., Nilsson,R., Nishiguchi,S., Nishikawa,S., Nori,F., Ohara,O.,
            Okazaki,Y., Orlando,V., Pang,K.C., Pavan,W.J., Pavesi,G.,
            Pesole,G., Petrovsky,N., Piazza,S., Reed,J., Reid,J.F., Ring,B.Z.,
            Ringwald,M., Rost,B., Ruan,Y., Salzberg,S.L., Sandelin,A.,
            Schneider,C., Schonbach,C., Sekiguchi,K., Semple,C.A., Seno,S.,
            Sessa,L., Sheng,Y., Shibata,Y., Shimada,H., Shimada,K., Silva,D.,
            Sinclair,B., Sperling,S., Stupka,E., Sugiura,K., Sultana,R.,
            Takenaka,Y., Taki,K., Tammoja,K., Tan,S.L., Tang,S., Taylor,M.S.,
            Tegner,J., Teichmann,S.A., Ueda,H.R., van Nimwegen,E., Verardo,R.,
            Wei,C.L., Yagi,K., Yamanishi,H., Zabarovsky,E., Zhu,S., Zimmer,A.,
            Hide,W., Bult,C., Grimmond,S.M., Teasdale,R.D., Liu,E.T.,
            Brusic,V., Quackenbush,J., Wahlestedt,C., Mattick,J.S., Hume,D.A.,
            Kai,C., Sasaki,D., Tomaru,Y., Fukuda,S., Kanamori-Katayama,M.,
            Suzuki,M., Aoki,J., Arakawa,T., Iida,J., Imamura,K., Itoh,M.,
            Kato,T., Kawaji,H., Kawagashira,N., Kawashima,T., Kojima,M.,
            Kondo,S., Konno,H., Nakano,K., Ninomiya,N., Nishio,T., Okada,M.,
            Plessy,C., Shibata,K., Shiraki,T., Suzuki,S., Tagami,M., Waki,K.,
            Watahiki,A., Okamura-Oho,Y., Suzuki,H., Kawai,J. and Hayashizaki,Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK077050.1 and AV277048.2.
            
            On Oct 13, 2006 this sequence version replaced NM_175173.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK077050.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2196              AK077050.1         2-2197
            2197-2759           AV277048.2         115-677
FEATURES             Location/Qualifiers
     source          1..2759
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 8.95 cM"
     gene            1..2759
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /note="WD repeat domain 27"
                     /db_xref="GeneID:71682"
                     /db_xref="MGI:MGI:1918932"
     exon            1..28
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            29..221
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             36..2378
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /codon_start=1
                     /product="WD repeat-containing protein 27"
                     /protein_id="NP_780382.2"
                     /db_xref="CCDS:CCDS37443.1"
                     /db_xref="GeneID:71682"
                     /db_xref="MGI:MGI:1918932"
                     /translation="METPPEMPSTDGHTRAIVTERYVVESKKSAAHVPLACSTQHCAF
                     PLDGSRLCVWSSKDPSHQLLTLQGHHQLITAVVFGNQIDPLLLCSASEDYIIMWNVAE
                     CREKTLKGLTPRGTILGSLLQTVLCLRFSLDDRAIAVCAGNKISVMDVEKQSVLVELK
                     GHQGSVTAVEFCPWQAHTLISVSEDRSFKVWDFCVGSLIYSSSILTAYPLLNLLINEE
                     NQQLVTGSADGQLWIFSLMEGHHYHCVAHVDVRKKRETFTTRRMMAEQCSLPEDHQCR
                     CRHEADKRGEAEATFPILSLAPCDLCLPDSQRGAFASECTKCLWIGSSTALFILNLAS
                     FELEAALHFKEFQSLSVQVAGSCAMVSEPMSAKAFCMLSSMFGSKIAVLEIDLAALLS
                     TQQYPRAGKVLSVLASSCVLPTSPLYFGIIKEKFPKLANTKQHAVKSVVEDRPLVFHT
                     KVRSSGYTLAPHMAMFSPKTNIKHHNKRSSKYKNNYKCKECSLENFLPRNLSRQVAVA
                     QKPVAVSCLQFSGDGQKLACGLGNHLSLVFNASLSGPPAAFSGHDGAVSTICWSHDKR
                     WLLSTGRDRTLRVWSVHRTELMLLLAPDAFPKPVTSAQFYYMDTFILLSSGPEFCLLK
                     YHIDLCRDDIRRYKPKSRYKPIFRLPMTSGADITSLSAVNDFYSHIVLTAGRDRAVEV
                     FDLNAGCSAAVLAEVHSRPVHRICQNKGSSFVAQHSLAYNLFLTAAVGDGIRLWDLRN
                     LRLMCMKWAPAAFCTVLQDTQIRLLKWPSTQQLLSLSQPP"
     exon            222..363
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            364..488
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            489..602
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            603..654
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            655..725
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            726..846
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            847..964
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            965..1068
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1069..1136
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1137..1258
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1259..1341
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1342..1420
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1421..1498
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1499..1596
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1597..1686
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1687..1808
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1809..1942
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1943..2040
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2041..2162
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2163..2260
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2261..2359
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2360..2424
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2425..2759
                     /gene="Wdr27"
                     /gene_synonym="0610012K18Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaccatagcg acgcggctgg cgtggtcggc tgataatgga aacgcctcca gagatgccct
       61 ccactgatgg ccacactcga gctatagtta cagaacgata cgtggttgag tcgaagaagt
      121 ctgcagctca tgttccactg gcttgcagca cacagcactg tgctttccct ttagatggga
      181 gccgtctctg tgtgtggagc tccaaggacc cttctcacca gcttctcacc ctacaaggac
      241 accatcaatt gattactgct gtggtttttg gaaatcaaat agatccactt ctcctctgct
      301 ctgcatcaga ggattatatt ataatgtgga acgtggctga atgcagagag aagacactta
      361 aagggctgac tcctcgaggg actatcctgg gctccctttt acaaacagtg ttgtgtttgc
      421 gatttagtct ggatgatcgt gctattgcag tgtgtgctgg aaacaaaata tctgtgatgg
      481 atgtggagaa gcagtctgtg ctggtagagt tgaagggcca tcaaggctca gtgacagcag
      541 tggagttctg tccctggcaa gcacacaccc tcatctctgt gtctgaagac cgaagcttta
      601 aggtctggga cttttgtgtg ggatccttga tatacagttc atccatttta acagcttacc
      661 ctctcctaaa tttgcttatc aatgaagaaa accaacagct ggtcaccggc agtgctgatg
      721 gccagctgtg gatctttagt ttgatggagg gacatcacta ccactgtgtg gcacatgtgg
      781 acgtaaggaa gaaaagggag actttcacca cccgaagaat gatggctgag cagtgcagcc
      841 tgccagaaga ccatcagtgc cggtgcagac atgaggcgga taaaagggga gaggctgaag
      901 caacattccc tatcctgagc ctggcgccct gtgacctctg cctgccggat tcccagcgtg
      961 gagcttttgc ttctgagtgc accaaatgtc tatggattgg aagctcaaca gctctattca
     1021 tattgaacct ggcaagcttt gaattggaag ccgctttaca cttcaaggaa tttcagagcc
     1081 tgagcgtcca agttgctggg tcgtgtgcaa tggtgagcga gcccatgagc gccaaggcat
     1141 tttgcatgct ttcatctatg tttgggagta agattgctgt attggaaatt gacttggctg
     1201 ctctgctcag cactcagcag taccctcggg caggaaaggt gctttctgtg ctggcaagct
     1261 cctgtgtcct gccaacttct ccactgtatt ttggaattat taaggaaaaa tttcctaagc
     1321 ttgccaatac caaacaacat gctgtgaaga gtgtcgtgga ggacaggccc ctggttttcc
     1381 acactaaggt taggtcgtcc ggctatacat tggcaccaca tatggctatg ttttctccaa
     1441 agactaacat caaacatcat aacaaaagat cttcaaagta caagaacaat tacaaatgta
     1501 aagagtgctc tttggagaat ttcctaccca gaaatctcag cagacaggtt gctgtagccc
     1561 agaagcctgt tgctgtgagc tgtctgcagt tctcagggga tggacagaag ctggcctgtg
     1621 gcttaggtaa ccacctgtcc ctggtcttca acgccagcct ttcaggacca ccggctgcct
     1681 tttcaggtca tgatggagct gtgagcacta tctgctggag ccatgacaag aggtggctgc
     1741 tgtctacagg ccgagaccgg acactgaggg tgtggtcagt tcacaggaca gaactcatgc
     1801 tgcttttggc tccagatgct tttcccaagc cagtaacatc tgcacagttc tactacatgg
     1861 acaccttcat actgctgtct tctggcccag agttctgcct gctgaagtac cacattgacc
     1921 tctgtaggga tgacatacga aggtataaac caaaaagcag gtataagcct attttcaggt
     1981 tgccaatgac cagtggggcg gacataacca gcctgtcagc ggtgaacgac ttttattccc
     2041 acatcgtcct cacagctggc cgcgaccggg ctgttgaagt ttttgacctc aatgctggct
     2101 gcagcgctgc agtgcttgct gaagtccatt ccaggcctgt tcatcgaatt tgtcaaaata
     2161 aaggatcatc ctttgtagcc cagcattccc tggcatataa tcttttcctg acggcagctg
     2221 ttggtgatgg gattcgactg tgggacttga ggaacttgag gcttatgtgt atgaaatggg
     2281 ctccagcagc tttctgcacc gtcttgcagg acacacagat acgattactg aagtggcctt
     2341 caacccagca gctcctcagc ttgtcacagc caccttagac gggaaacttc agctatttgt
     2401 ggctgagtga tgaccgtcat gctgatgcat tgttggctag ttttatatca actctacaca
     2461 agttggagtc acttgggaag gaggaacctc aattgagaaa atgcccccac cagcctggcc
     2521 tgtggtgcgt cttcttgatc gatgattgat gttggaggat tcagatcact gtgggcagca
     2581 ccactcctgg gctggtagtc ctgactgcta tcatgaaact gagtaaacca ggagtgtcaa
     2641 tccagaaagc agcactccat gtcctctgca tcagctactg cctccagatt cttgtcctgg
     2701 cttcatccaa tgatgtatca tgaagtagaa gtggaaacaa aataaagtcc cttctcccc
//
