LOCUS       NM_027614               2228 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus WD repeat domain 20, retrogene (Wdr20rt), mRNA.
ACCESSION   NM_027614
VERSION     NM_027614.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Lin,Q., Donahue,S.L., Moore-Jarrett,T., Cao,S., Osipovich,A.B. and
            Ruley,H.E.
  TITLE     Mutagenesis of diploid mammalian genes by gene entrapment
  JOURNAL   Nucleic Acids Res 34 (20), e139 (2006)
   PUBMED   17062627
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK015014.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK015014.1, BC050778.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 27.21 cM"
     gene            1..2228
                     /gene="Wdr20rt"
                     /gene_synonym="4921538B03Rik; 4930427E19Rik; Wdr20;
                     Wdr20b"
                     /note="WD repeat domain 20, retrogene"
                     /db_xref="GeneID:70948"
                     /db_xref="MGI:MGI:1918198"
     exon            1..1981
                     /gene="Wdr20rt"
                     /gene_synonym="4921538B03Rik; 4930427E19Rik; Wdr20;
                     Wdr20b"
                     /inference="alignment:Splign:2.1.0"
     CDS             249..1952
                     /gene="Wdr20rt"
                     /gene_synonym="4921538B03Rik; 4930427E19Rik; Wdr20;
                     Wdr20b"
                     /note="WD repeat domain 20b"
                     /codon_start=1
                     /product="WD repeat-containing protein 20"
                     /protein_id="NP_081890.1"
                     /db_xref="CCDS:CCDS25943.1"
                     /db_xref="GeneID:70948"
                     /db_xref="MGI:MGI:1918198"
                     /translation="MATEGRGKETNEIKTHFTTREGLYRLLPHSEYSRPNRVPFNSQG
                     SNPVRVSFVNLNDQTGNGNRLCFSVGRELYVYIYKGVRKAADLSKPIDKRIYKGTQPT
                     CHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPG
                     SDSLFLVAHSSGNMYSYNVEHTYGTTAPHYQLLKQGESFAVHNCKSKSTRDLKWTVGE
                     GALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSPDGKYIV
                     TGGEDDLVTVWSFLDCRVIARGRGHKSWVSVVAFDPYTTSVEESDPMEFSDSDKNFQD
                     LLHFGRDRANSTQSRLSKQNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPL
                     SRARAHANVMNATGLPAGSNGSAVTTPGNSVPPPLPRSNSLPHSAVSNAASKGSVMDG
                     AITSGVSKFALLSLHDRKERHHEKDRKRNHSMGHISSKSSDKLNLVNKAKTDPAKTLG
                     TSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPGKVSKFQ
                     P"
     exon            1982..2228
                     /gene="Wdr20rt"
                     /gene_synonym="4921538B03Rik; 4930427E19Rik; Wdr20;
                     Wdr20b"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      2228
                     /gene="Wdr20rt"
                     /gene_synonym="4921538B03Rik; 4930427E19Rik; Wdr20;
                     Wdr20b"
                     /note="putative"
ORIGIN      
        1 ggaacctaac ttgggtcctt tgcaagaata gcacgcactc ttaactgctg agacatctct
       61 tcagccccat ttctccaaaa tgtttcttaa agcccctaca tttacagata tctacaaaaa
      121 ccgtatctgt acatctgtta actaaaaatt atcaagcgag gttagtgtac tgaaaaccgt
      181 agacacagcc tgcgtggtgg gcgtgatccg ggcacttagg gcaggcagga tgaacgcggc
      241 ttcccaagat ggcgacggag ggaagaggaa aggagacgaa cgagattaag acccatttca
      301 ccacccgaga aggtctgtac aggctgctgc cgcactcgga gtacagtcgg cccaaccggg
      361 tgcccttcaa ctcacaggga tccaatcctg tccgcgtctc cttcgtaaac ctcaacgacc
      421 agactggtaa tggcaaccgc ctgtgcttca gtgtgggccg ggagctctac gtctatatct
      481 acaagggggt ccgcaaggct gccgacctga gtaaaccaat agataaaagg atatacaaag
      541 gaacgcagcc cacttgtcat gatttcaacc acctaacggc cacagcggag agcgtctctc
      601 tcctagtggg cttttccgca ggccaagtcc agcttataga cccaatcaag aaagaaacca
      661 gcaagctctt taacgaggaa agactaatag acaagtcacg cgtaacctgt gtcaaatggg
      721 tccctggttc ggacagcctt ttcctagtag cccattcaag tgggaacatg tactcgtaca
      781 atgtggagca tacttacggc accacagccc cccactacca gctcctgaag cagggagaga
      841 gctttgccgt gcacaattgc aagagcaaat ccacaaggga ccttaagtgg acggtgggcg
      901 agggggccct caacgagttt gctttctccc cagatggcaa gttcttagcg tgtgtgagcc
      961 aggacgggtt tctgcgcgtg ttcaactttg actcagcgga gctgcacggt acaatgaaaa
     1021 gctactttgg gggcttgctt tgtctgtgct ggagcccaga tggcaagtac attgtgacag
     1081 gtggagagga cgacttggtg acagtctggt cctttctaga ctgccgagta atagctagag
     1141 gccgtgggca caaatcctgg gtcagtgttg tagcatttga tccctatact actagtgtag
     1201 aagaaagtga ccctatggag tttagtgaca gtgacaagaa cttccaggac cttcttcatt
     1261 ttggcagaga tcgagcgaac agtacacagt ctagactatc caaacagaac tcgacagaca
     1321 gccgccctgt aagtgttacg tatcggtttg gttcggtggg ccaggataca cagctgtgtt
     1381 tatgggacct tacagaagac atccttttcc ctcaccagcc cctctcaaga gcaagggcac
     1441 atgcaaacgt tatgaatgcc acaggtctgc ctgccggaag caatgggagc gctgtcacta
     1501 cacctgggaa ctctgtgccc cctccattgc cacggtccaa tagccttcca cattcagcag
     1561 tctccaatgc tgctagcaaa ggcagcgtca tggacggggc cattacctct ggggtcagca
     1621 agtttgcact tctgtcgcta catgaccgga aggagagaca ccacgagaaa gaccgtaaac
     1681 gaaatcatag tatgggacac atttccagca agagcagtga caaactgaac ctagttaata
     1741 aagccaaaac ggacccagct aaaactttgg ggacatccct gtgtcctcgg atggaagatg
     1801 ttcccttgtt agagccactg atctgtaaaa agatagctca tgaaagactg acggtattgg
     1861 tttttcttga agactgtata gtcactgctt gtcaggaggg atttatttgc acatgggcaa
     1921 ggcctggtaa agttagtaag tttcaaccct gaatgctgca ccagatctag aacttgacga
     1981 gatcagctgt gaaccagggt gaccgtcaca acaggaggac tttgctctcc acagaagtgt
     2041 ttctaggtgc actggcttct cttctcaaga ctttctgctc cttgacatcc tttgataata
     2101 actcaggtac aagatgctgt tcttggagcc caacatctcc cttgtatgta caaatggatt
     2161 cttcagtgcc tcttgtcttc ctgctcagcc agtaccaact gtagaataaa ggagttttta
     2221 tccatctt
//
