LOCUS       NM_027149               2376 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus WD repeat domain 20 (Wdr20), transcript variant 1,
            mRNA.
ACCESSION   NM_027149 XM_619030
VERSION     NM_027149.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2376)
  AUTHORS   Yu C, Zhang YL, Pan WW, Li XM, Wang ZW, Ge ZJ, Zhou JJ, Cang Y,
            Tong C, Sun QY and Fan HY.
  TITLE     CRL4 complex regulates mammalian oocyte survival and reprogramming
            by activation of TET proteins
  JOURNAL   Science 342 (6165), 1518-1521 (2013)
   PUBMED   24357321
  REMARK    Erratum:[Science. 2014 May 2;344(6183):370]
REFERENCE   2  (bases 1 to 2376)
  AUTHORS   Evsikov AV, Graber JH, Brockman JM, Hampl A, Holbrook AE, Singh P,
            Eppig JJ, Solter D and Knowles BB.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
REFERENCE   3  (bases 1 to 2376)
  AUTHORS   Taniwaki T, Haruna K, Nakamura H, Sekimoto T, Oike Y, Imaizumi T,
            Saito F, Muta M, Soejima Y, Utoh A, Nakagata N, Araki M, Yamamura K
            and Araki K.
  TITLE     Characterization of an exchangeable gene trap using pU-17 carrying
            a stop codon-beta geo cassette
  JOURNAL   Dev Growth Differ 47 (3), 163-172 (2005)
   PUBMED   15840001
REFERENCE   4  (bases 1 to 2376)
  AUTHORS   Nishimura M, Yokoi N, Miki T, Horikawa Y, Yoshioka H, Takeda J,
            Ohara O and Seino S.
  TITLE     Construction of a multi-functional cDNA library specific for mouse
            pancreatic islets and its application to microarray
  JOURNAL   DNA Res 11 (5), 315-323 (2004)
   PUBMED   15747579
REFERENCE   5  (bases 1 to 2376)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   6  (bases 1 to 2376)
  AUTHORS   Araki K, Imaizumi T, Sekimoto T, Yoshinobu K, Yoshimuta J, Akizuki
            M, Miura K, Araki M and Yamamura K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC064773.1, AK136417.1 and AI303487.1.
            
            On Jun 13, 2018 this sequence version replaced NM_027149.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC064773.1, AK136417.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1202              BC064773.1         9-1210
            1203-2370           AK136417.1         1214-2381
            2371-2376           AI303487.1         12-17               c
FEATURES             Location/Qualifiers
     source          1..2376
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 60.78 cM"
     gene            1..2376
                     /gene="Wdr20"
                     /gene_synonym="2310040A13Rik; Wdr20a"
                     /note="WD repeat domain 20"
                     /db_xref="GeneID:69641"
                     /db_xref="MGI:MGI:1916891"
     exon            1..278
                     /gene="Wdr20"
                     /gene_synonym="2310040A13Rik; Wdr20a"
                     /inference="alignment:Splign:2.1.0"
     CDS             30..1739
                     /gene="Wdr20"
                     /gene_synonym="2310040A13Rik; Wdr20a"
                     /note="isoform 1 is encoded by transcript variant 1; WD
                     repeat domain 20A"
                     /codon_start=1
                     /product="WD repeat-containing protein 20 isoform 1"
                     /protein_id="NP_081425.2"
                     /db_xref="CCDS:CCDS26173.1"
                     /db_xref="GeneID:69641"
                     /db_xref="MGI:MGI:1916891"
                     /translation="MATEGGGKEMNEIKTQFTTREGLYKLLQHSEYSRPNRVPFNSQG
                     SNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPT
                     CHDFNLLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPG
                     SESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTV
                     GEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKY
                     IVTGGEDDLVTVWSFLDCRVIARGHGHKSWVSVVAFDPYTTSVEESDPMEFSGSDEDF
                     QDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQ
                     PLSRARTHTNVMNATSPPAGSNGNSVTTPGNSVPPPLPRSNSLPHSAVSNAASKGSVM
                     DGAIASGVSKFATLSLHDRKERHHEKDHKRNHSMGHISSKSSDKLNLVTKAKTDPAKT
                     LGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPGKVVS
                     FNP"
     exon            279..461
                     /gene="Wdr20"
                     /gene_synonym="2310040A13Rik; Wdr20a"
                     /inference="alignment:Splign:2.1.0"
     exon            462..2376
                     /gene="Wdr20"
                     /gene_synonym="2310040A13Rik; Wdr20a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttagggcagg atgaacgctg ctttccaaga tggcgacgga gggaggaggg aaggagatga
       61 acgagattaa gacccaattc accacccggg aaggtctgta caagctgctg cagcactcgg
      121 agtacagccg gcccaaccgg gtgcccttca actcgcaggg atccaaccct gtccgcgtct
      181 ccttcgtaaa cctcaacgac cagtctggca acggcgaccg cctctgcttc aatgtgggcc
      241 gggagctcta cttctatatc tacaaggggg tccgcaaggc tgccgacctg agtaaaccca
      301 tagataagag gatatacaaa gggacgcagc ccacttgcca tgacttcaac ctcctcacag
      361 ctacagcaga gagcgtctct ctcctagtgg gcttttccgc aggccaagtc cagcttatag
      421 acccaatcaa gaaagagacc agcaagctgt ttaatgagga aagactaata gacaagtccc
      481 gcgtaacctg tgtcaaatgg gttcctggtt cggaaagcct tttcctagta gcccattcaa
      541 gtgggaacat gtacttatat aatgtggagc acacttgtgg caccacagcc ccccactacc
      601 agctcctgaa gcagggagaa agctttgccg tgcacacttg caagagcaaa tccacgagga
      661 accctctcct taagtggacg gtgggcgagg gggccctcaa cgagtttgct ttctccccag
      721 atggcaagtt cttagcgtgt gtgagccagg acgggtttct gcgtgtgttc aactttgact
      781 cagtggagct gcacggtaca atgaaaagct actttggggg cttgctttgt gtgtgctgga
      841 gcccagatgg caagtacatt gtgacaggtg gagaggacga cttggtgaca gtctggtcct
      901 ttctagactg ccgagtaata gctagaggcc atgggcacaa atcctgggtc agtgttgtag
      961 catttgatcc ctatactact agtgtagaag aaagtgaccc tatggagttt agtggcagtg
     1021 acgaggactt ccaggacctt cttcattttg gcagagatcg agcgaacagt acacagtcta
     1081 ggctatccaa acggaactct acagacagtc gccctgtaag tgttacgtat cggtttggtt
     1141 cggtgggcca ggatacacag ctgtgtttat gggaccttac agaagacatc cttttccctc
     1201 accagcccct ctcaagagca aggacacata caaacgttat gaatgccaca agtccgcctg
     1261 ccggaagcaa tgggaacagt gtcactacac ctgggaactc tgtgccccct ccattgccac
     1321 ggtccaatag ccttccacat tcagcagtct ccaatgctgc tagcaaaggc agcgtcatgg
     1381 acggggccat tgcctccggg gtcagcaagt ttgcaactct gtcgctacat gaccggaagg
     1441 agagacacca cgagaaagac cataaacgaa accatagtat gggacacatt tccagcaaga
     1501 gcagtgataa actgaaccta gttactaaag ccaaaacgga cccagctaaa actctgggga
     1561 catccctgtg tcctcggatg gaagatgttc ccttgttaga gccactgatc tgtaaaaaga
     1621 tagctcatga aagactgacg gtattggttt ttcttgaaga ctgtatagtc actgcttgtc
     1681 aggagggatt tatttgcaca tgggcaaggc ccggtaaagt ggtaagtttt aatccttaat
     1741 gctgcaccag atctagaact tgactaggta gtgattttta tttcttgtgg gaggggtggg
     1801 atgtacaatg aatgtgaatg acacttctta atgtaaatct aaatgcatca gagccataat
     1861 tttggatact gcatgccatg taattctgaa tcatttgata attcacctta gagcatttaa
     1921 aaaatatata atcagactaa ttgccagcca agtcaatcat ccctctgggt atatagagtc
     1981 ccaaagttag cgctcctgta tgaggctatt tcagttttag ggaaatcatg acagtgtgga
     2041 gaaataatga cattaaaatg ctaaagtcaa aatttatgct ttaactggga tattttttgc
     2101 gtaaccactc aactagatta ttgtatacct ggtcagtgta tgtcagtaca catgggtatt
     2161 aattatcatt tatagtccaa ctttttatct taaattataa aataacttag gaatttatga
     2221 aagttaactt aggaacaaag cattcatcag ggttgattga tattattttt acattgtctg
     2281 gcaatccaca gaaagagaag agccttaatt tttaaaaccc attttagtca ttttatgaca
     2341 attaaaattg tttaataaac atcttttttc aaagaa
//
