LOCUS       XM_036156522            3132 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus WD repeat containing planar cell polarity
            effector (Wdpcp), transcript variant X20, mRNA.
ACCESSION   XM_036156522
VERSION     XM_036156522.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3132
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..3132
                     /gene="Wdpcp"
                     /gene_synonym="Frtz; homolog-13"
                     /note="WD repeat containing planar cell polarity effector;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 ESTs, 60 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 5 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:216560"
                     /db_xref="MGI:MGI:2144467"
     CDS             1250..2980
                     /gene="Wdpcp"
                     /gene_synonym="Frtz; homolog-13"
                     /codon_start=1
                     /product="WD repeat-containing and planar cell polarity
                     effector protein fritz homolog isoform X10"
                     /protein_id="XP_036012415.1"
                     /db_xref="GeneID:216560"
                     /db_xref="MGI:MGI:2144467"
                     /translation="MISYYDIPGPANRTIDRHLAVNSTQDLVVCWWPLVSDDVWPWTP
                     VSSEKDRANMLLLGFTQGGLEVLSFVRTEWSPLDVHFGTKQPYQVFTVECSVSVDKEP
                     MADSCIYESVRNKLHCVSVTRIPLRSKAISCCRNSTEDKLIVGCEDSSVILYEAHRGV
                     TLLAQAELRPSLISCHPSGAILLVGSNQGELQIFDIALSPINIQLLAEDYSPKETLQF
                     KKFFDVSSSLVQMQWMAPPVVFQKPKRGEICDLLFLRFNKGPLGVLLFKLGILTRGQL
                     GLVDLILQYIHYSEVYEAISILRSMDWDTLGQQCLIGMGTIVNHLLRQRLTPEREAQL
                     EASLGTFYAPTRPLLDTTILEYREPVSKYARRLFHHLLRYKRFEKAFLLAVDIGARDL
                     FMDIHYLALDMGELALAEVARRRAHDIDVESVSSGVDEDPDSEFQSGNEDHAIWLHTA
                     HSESLTTLILEELLGPLDRRDMLNEGFASSALMPEGENKFPGLLPSIGSTHMQTLQQK
                     IPNGPSSRWAIERRTEEEEEEEEEEEEELCTDSSGATTWNAEGELKEDQRKQDIGDVG
                     SLRMVHFGLV"
ORIGIN      
        1 gacccggaaa caaaaccttt taaaaactct ctcagaggcg ggaggaattg acgcttgcgg
       61 aagaacgggc agcttcaccg ttgctaggcg acgaggcagc ctcacctgag cgctctccag
      121 accaagagct tgtggagctg tgttctcacg tcccaggctg gacagagatt tcctctgctg
      181 tcagatgtct ttctgcttga ctgaactaca cctgtggtct ctgaaaagca ccttacacat
      241 tgcggattaa ctgaattaaa ataaagattc ataaatgcac tatacctgag attaggaaaa
      301 ggacacctgc aatcagacac cttttgcctg gagaagagaa ttccagtgac agccattata
      361 gacgagaact ttggaagggt gcagaaactt gaggagtatg cattgcagaa gatgaggatg
      421 tggcaccagg ctgacagcca aggggatgca cgcctgcaga aaggaatgag acacctccat
      481 gatgtggaaa tacttaatta aggaggctcc aaaccctaga caccaaagcc actggaggaa
      541 gacctgctga acggaaagca gaggaattga agctgatgtg ttgatgattg aggtcttctt
      601 catcaccctc gattccgagg atgctttctg acctgtttat ttgccaagaa agaaggagct
      661 tggaaataga atcctttcct gcggttactg cccgacctcc cagaagaaaa catctacacg
      721 gatgttttag tggtcttgtg caaatcactc tggcccctgg ctggtcagtg aagcctactg
      781 agtgaaacct gttccgggtt ggaaggcgtc aggagatgtc cagagcatcg cttctgagag
      841 agctggggaa tcatcagaca cctgaacgtt tctacgggaa agaggacaag taataaaaag
      901 aaaacagata gagacatcgg cgtctaccag tactatgaca agaaagatcc atcagtatca
      961 gcaacagagc atggtaactt agaagaaaaa caaaggctgg cagaatcacg agattatcct
     1021 tggacactca aaaatagacg cccagaaaaa cttcgagatt cactgaagga gttggaggaa
     1081 ctgatgcaaa gcagtccgtg tgtgctgagc aaatggaaga gcaaatacat ctgccagctc
     1141 ctgtttggtt caggtgtgct ggtgtcccta agtctttctg ggcctcagct ggagaaagtg
     1201 gtgattgaca gaagcctggt ggggaagctc atctcagaca ccatcagtga tgatttccta
     1261 ttatgacata cctggcccag ccaacaggac aatagatcgt cacttagctg tcaactccac
     1321 tcaggatcta gttgtttgtt ggtggccgct ggtcagtgat gatgtttggc cttggactcc
     1381 agtttcttct gagaaggaca gagccaatat gctgttgctg ggctttactc aaggaggatt
     1441 ggaggttcta agttttgttc gcacagaatg gagtcccctg gatgttcact tcggcaccaa
     1501 acaaccttat caggtgttca cagtggagtg ctccgtcagt gtagacaagg agcccatggc
     1561 tgacagctgt atttatgaat ctgtccggaa caaactccac tgcgtgtcag ttaccagaat
     1621 accactaaga tcgaaggcca tcagctgctg caggaactct acggaagaca aactgatcgt
     1681 gggctgtgaa gactcttcag taattctcta tgaagctcac cgtggtgtga ctctcctggc
     1741 ccaggctgaa cttaggcctt cattgataag ctgccaccca agtggcgcca ttcttctggt
     1801 tggcagcaac caaggggagc tacaaatttt tgatattgct ctgtccccta tcaacatcca
     1861 gctcttggca gaagattact caccgaagga gactctgcaa ttcaagaagt tctttgatgt
     1921 ttcaagcagt cttgttcaaa tgcagtggat ggctcctcct gttgttttcc agaagcctaa
     1981 aagaggagaa atctgtgatc ttctcttcct caggttcaac aaaggacctt tgggtgtgct
     2041 actgtttaaa cttggcatcc tcacacgagg acaactgggc ctggtagacc tcatcttaca
     2101 gtacattcac tacagtgagg tatatgaggc catcagcatc ctgcgcagca tggactggga
     2161 caccctgggc cagcagtgtt tgatcggcat gggcaccatc gtgaaccatc ttcttagaca
     2221 gaggctcaca ccagagagag aagcacagct tgaggcgagc cttggaacct tctatgctcc
     2281 aacaagacca cttctggata caactatttt ggaatataga gagccagtca gcaagtatgc
     2341 caggaggctc ttccaccacc tgctcaggta caagagattt gaaaaggcct ttcttctagc
     2401 tgttgacatt ggagctcgtg acctgttcat ggacattcat taccttgctc tagatatggg
     2461 tgaactggca ctggctgaag tggcaagaag aagggcgcat gatattgatg ttgagtcagt
     2521 atcctctgga gtcgatgagg atccagactc agaattccag agcggaaatg aagaccatgc
     2581 catttggctg catactgcac attcagagtc actgaccacc ctgattttag aagagctcct
     2641 ggggcccttg gacagaagag acatgctgaa tgaaggtttt gccagctcag ctctcatgcc
     2701 tgaaggagaa aacaagtttc caggccttct tccttccatt ggttcaacac acatgcaaac
     2761 tcttcaacag aaaataccaa atggcccttc aagcagatgg gcaattgaga gaaggactga
     2821 ggaagaagag gaggaggagg aggaggaaga ggaggagtta tgcactgact cttcaggggc
     2881 caccacctgg aatgcagaag gagaactgaa agaagaccaa aggaaacagg acattggaga
     2941 tgttggttct ctcagaatgg ttcactttgg tttggtgtaa atcatccgaa acaccaaaaa
     3001 gaaagctgcc cttttcattt cttttctatt gacctgatca ataaaaatct tcacgtgtgg
     3061 attttaatag aaggaaagat agtagtacat gtagcattgc ataagtgacc ctcaataaaa
     3121 gttccgaaac aa
//
