LOCUS       NM_001170858            2209 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus WD repeat and coiled coil containing (Wdcp),
            transcript variant 1, mRNA.
ACCESSION   NM_001170858
VERSION     NM_001170858.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2209)
  AUTHORS   Taniwaki,T., Haruna,K., Nakamura,H., Sekimoto,T., Oike,Y.,
            Imaizumi,T., Saito,F., Muta,M., Soejima,Y., Utoh,A., Nakagata,N.,
            Araki,M., Yamamura,K. and Araki,K.
  TITLE     Characterization of an exchangeable gene trap using pU-17 carrying
            a stop codon-beta geo cassette
  JOURNAL   Dev Growth Differ 47 (3), 163-172 (2005)
   PUBMED   15840001
REFERENCE   2  (bases 1 to 2209)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   3  (bases 1 to 2209)
  AUTHORS   Araki,K., Imaizumi,T., Sekimoto,T., Yoshinobu,K., Yoshimuta,J.,
            Akizuki,M., Miura,K., Araki,M. and Yamamura,K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT571254.7.
            
            Transcript Variant: This variant (1) encodes the longer protein
            (isoform 1).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC068281.1, AK155130.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-149               CT571254.7         3096-3244
            150-1965            CT571254.7         9920-11735
            1966-2080           CT571254.7         15071-15185
            2081-2209           CT571254.7         16639-16767
FEATURES             Location/Qualifiers
     source          1..2209
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 2.1 cM"
     gene            1..2209
                     /gene="Wdcp"
                     /gene_synonym="A430092C04"
                     /note="WD repeat and coiled coil containing"
                     /db_xref="GeneID:238037"
                     /db_xref="MGI:MGI:3040699"
     exon            1..149
                     /gene="Wdcp"
                     /gene_synonym="A430092C04"
                     /inference="alignment:Splign:2.1.0"
     exon            150..1965
                     /gene="Wdcp"
                     /gene_synonym="A430092C04"
                     /inference="alignment:Splign:2.1.0"
     CDS             169..2160
                     /gene="Wdcp"
                     /gene_synonym="A430092C04"
                     /note="isoform 1 is encoded by transcript variant 1; WD
                     repeat-containing protein C2orf44 homolog; WD repeat and
                     coiled-coil-containing protein C2orf44 homolog"
                     /codon_start=1
                     /product="WD repeat and coiled-coil-containing protein
                     isoform 1"
                     /protein_id="NP_001164329.1"
                     /db_xref="CCDS:CCDS49019.1"
                     /db_xref="GeneID:238037"
                     /db_xref="MGI:MGI:3040699"
                     /translation="MELGNGKLPRTGLNSLNQAVHPTWGLAWTDGNRVVLTDLQLHSG
                     EAKFGDSRVIGRFESVCGVCWAPVRTVRSPALLAIQHRKLVSVWQLCPSTAGASKWQA
                     SQTSEVRESLPILPRGCVWHPKDAVLTVLTAQGVSIFPNVHQDGSRVKVDVNTKGRVY
                     CACWTLDGQRLVVAIDSNLHSYIWDSSQKSLHSCSFCPVFPVNCSIRSIEATGNSQVA
                     IATELPLHKLCSLNASEALDGPPNGDDGSVHTRPVDEQVATMDMNSGVTVSPFSVPLD
                     LTHIHFNPSQAEQSSLICLRKKDYLTGTGQDSSHLILVTFKKAITITKKVAIPGILVP
                     DLIAFNLTAELVAVASNTCNVILIYSAAPSSMPNIQQIQLESNERPKGICFLTDRLLL
                     IAVGKQKPSEAAFLPSSEYGQYTVRLIVREMAQGSESSGTSAESQGAYSDFTALLSKA
                     DREKFTDSLSPGSSPLSQGLLLTPNSSTQSGRSGRALIQEIKSPLSPLSSDSVVHETL
                     HRPPWLCPALPRPSRTPEHTSTPELNSPQRENLQKEKETCPLSRELEILSRHLVAMQQ
                     YLSELTGFLHKEKRVAPAYPPSQDAPYVHLIYQNPCSVGPTERRAVLLCDGKLRLSTV
                     QQMFGLHLVEMLHEVLSSIPSNHMVTHNLHGPGGLFWSV"
     exon            1966..2080
                     /gene="Wdcp"
                     /gene_synonym="A430092C04"
                     /inference="alignment:Splign:2.1.0"
     exon            2081..2209
                     /gene="Wdcp"
                     /gene_synonym="A430092C04"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgacgcact caatagccaa tagtctagag gcatctccga ggtccaaagg ccgaggcttc
       61 cgttaggtgc ccgggacttc tgattcccgg tcctgtgacg tgagcggccc cgggatttta
      121 cgtgtgggac ggggaggcag aagactaaga tagcctttgt ccgaaaggat ggagctggga
      181 aacggaaaac tgcctaggac aggactgaac tcactgaacc aagcagtcca tccaacctgg
      241 ggcctggcct ggactgatgg gaatcgtgta gtcctgactg acttacagct tcatagtgga
      301 gaggccaagt tcggggactc ccgtgtcatt ggaaggtttg aatctgtctg tggggtttgc
      361 tgggcaccag tcagaacagt gcgctcgccg gctctgcttg ccatccagca caggaagctt
      421 gtctccgtgt ggcagctgtg tcccagcact gcaggagcaa gcaaatggca ggcgtctcag
      481 acctctgagg tcagggagtc actccctatc cttcctcggg gctgcgtgtg gcacccaaag
      541 gatgctgtcc tgaccgtgtt gactgcgcag ggtgtctcca tttttcctaa cgtccaccaa
      601 gatggttcca gggtaaaagt ggacgtcaac accaagggcc gcgtttactg tgcttgttgg
      661 accctggatg gccagcggct ggtggtggca atagacagca accttcattc gtatatctgg
      721 gacagttctc agaagtccct tcacagctgc tccttctgcc cagtgtttcc tgtgaattgc
      781 tccatccgct ccatcgaagc caccgggaac tcgcaggttg ctatagccac cgaacttcca
      841 ctccataagc tttgtagctt aaatgcatct gaagccttgg acggtccacc caacggtgac
      901 gatggctctg ttcatactcg ccctgtagat gagcaggtag ccactatgga catgaattct
      961 ggagtgacag tttctccctt ctcagtgcct ctggatctga ctcacataca tttcaaccca
     1021 tcacaagctg aacagagttc tcttatttgt ttaagaaaaa aggactactt gacaggaact
     1081 ggccaagatt cttcacattt gatcctggta acctttaaga aagcaattac cataacaaaa
     1141 aaggtcgcta ttcctggcat cctggttcct gatttaatag catttaacct gacagcagag
     1201 ctagtggccg tggcttccaa tacgtgtaac gtaattttga tctattcggc cgctccatct
     1261 tctatgccaa atatccagca aattcagtta gagagtaatg aaagaccaaa gggcatatgt
     1321 ttcttgacag acagactatt attaattgct gtagggaaac aaaagcccag tgaagcagcc
     1381 tttcttcctt cttcagaata cggtcagtat actgttcgtc tgatagttag agaaatggcc
     1441 cagggaagcg aatcttctgg aacatctgct gagagtcagg gcgcttactc cgacttcact
     1501 gctttgttaa gtaaagcaga tagagaaaag ttcactgaca gcctttcccc agggtcgagt
     1561 cccctgagcc aggggctctt gctaacacct aactccagta ctcagagtgg gaggtctgga
     1621 agagccctta ttcaagaaat taaaagtccc ttgtcccctc tgtccagtga ttccgttgtc
     1681 catgaaaccc ttcacaggcc cccctggctt tgcccagcat tgcctagacc cagcaggacc
     1741 ccagagcaca ccagcacccc agaactgaat tcacctcaaa gggagaactt acaaaaagaa
     1801 aaggaaacgt gcccactttc cagagagctg gaaatcctct ctcgacacct ggttgcgatg
     1861 cagcagtatc tttctgaact cacgggtttt ctacacaagg agaagcgcgt cgcccccgca
     1921 tatccaccct cgcaggatgc tccatatgtt cacctcattt accagaaccc ttgttctgta
     1981 ggtcccactg agagaagagc tgtgcttctc tgcgatggca agctgaggct cagtaccgtt
     2041 caacagatgt ttggcctcca ccttgttgaa atgctgcatg aggtcttgag ttcaattccc
     2101 agcaaccaca tggtgactca caacctccat ggacctggtg gcctcttctg gagtgtctga
     2161 agacagctac agtatattca catacataaa ataaatcttt aaaaaaaaa
//
