LOCUS       NM_001378295            2482 bp    mRNA    linear   ROD 07-APR-2024
DEFINITION  Mus musculus V-set and immunoglobulin domain containing 10 like 2
            (Vsig10l2), mRNA.
ACCESSION   NM_001378295
VERSION     NM_001378295.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2482)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2482)
  AUTHORS   Okazaki,Y., Furuno,M., Kasukawa,T., Adachi,J., Bono,H., Kondo,S.,
            Nikaido,I., Osato,N., Saito,R., Suzuki,H., Yamanaka,I.,
            Kiyosawa,H., Yagi,K., Tomaru,Y., Hasegawa,Y., Nogami,A.,
            Schonbach,C., Gojobori,T., Baldarelli,R., Hill,D.P., Bult,C.,
            Hume,D.A., Quackenbush,J., Schriml,L.M., Kanapin,A., Matsuda,H.,
            Batalov,S., Beisel,K.W., Blake,J.A., Bradt,D., Brusic,V.,
            Chothia,C., Corbani,L.E., Cousins,S., Dalla,E., Dragani,T.A.,
            Fletcher,C.F., Forrest,A., Frazer,K.S., Gaasterland,T.,
            Gariboldi,M., Gissi,C., Godzik,A., Gough,J., Grimmond,S.,
            Gustincich,S., Hirokawa,N., Jackson,I.J., Jarvis,E.D., Kanai,A.,
            Kawaji,H., Kawasawa,Y., Kedzierski,R.M., King,B.L., Konagaya,A.,
            Kurochkin,I.V., Lee,Y., Lenhard,B., Lyons,P.A., Maglott,D.R.,
            Maltais,L., Marchionni,L., McKenzie,L., Miki,H., Nagashima,T.,
            Numata,K., Okido,T., Pavan,W.J., Pertea,G., Pesole,G.,
            Petrovsky,N., Pillai,R., Pontius,J.U., Qi,D., Ramachandran,S.,
            Ravasi,T., Reed,J.C., Reed,D.J., Reid,J., Ring,B.Z., Ringwald,M.,
            Sandelin,A., Schneider,C., Semple,C.A., Setou,M., Shimada,K.,
            Sultana,R., Takenaka,Y., Taylor,M.S., Teasdale,R.D., Tomita,M.,
            Verardo,R., Wagner,L., Wahlestedt,C., Wang,Y., Watanabe,Y.,
            Wells,C., Wilming,L.G., Wynshaw-Boris,A., Yanagisawa,M., Yang,I.,
            Yang,L., Yuan,Z., Zavolan,M., Zhu,Y., Zimmer,A., Carninci,P.,
            Hayatsu,N., Hirozane-Kishikawa,T., Konno,H., Nakamura,M.,
            Sakazume,N., Sato,K., Shiraki,T., Waki,K., Kawai,J., Aizawa,K.,
            Arakawa,T., Fukuda,S., Hara,A., Hashizume,W., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Miyazaki,A., Sakai,K., Sasaki,D., Shibata,K.,
            Shinagawa,A., Yasunishi,A., Yoshino,M., Waterston,R., Lander,E.S.,
            Rogers,J., Birney,E. and Hayashizaki,Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC118232.10.
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, expression,
                                         longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-185               AC118232.10        133558-133742
            186-536             AC118232.10        134732-135082
            537-812             AC118232.10        135348-135623
            813-1088            AC118232.10        137179-137454
            1089-1337           AC118232.10        137946-138194
            1338-1595           AC118232.10        138777-139034
            1596-1886           AC118232.10        140303-140593
            1887-2183           AC118232.10        140929-141225
            2184-2306           AC118232.10        141860-141982
            2307-2331           AC118232.10        142240-142264
            2332-2384           AC118232.10        142374-142426
            2385-2482           AC118232.10        142508-142605
FEATURES             Location/Qualifiers
     source          1..2482
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 20.29 cM"
     gene            1..2482
                     /gene="Vsig10l2"
                     /gene_synonym="Gm1113"
                     /note="V-set and immunoglobulin domain containing 10 like
                     2"
                     /db_xref="GeneID:115487164"
                     /db_xref="MGI:MGI:2685959"
     exon            1..185
                     /gene="Vsig10l2"
                     /gene_synonym="Gm1113"
                     /inference="alignment:Splign:2.1.0"
     CDS             104..2482
                     /gene="Vsig10l2"
                     /gene_synonym="Gm1113"
                     /note="V-set and immunoglobulin domain-containing protein
                     10-like 2"
                     /codon_start=1
                     /product="V-set and immunoglobulin domain-containing
                     protein 10-like 2 precursor"
                     /protein_id="NP_001365224.1"
                     /db_xref="GeneID:115487164"
                     /db_xref="MGI:MGI:2685959"
                     /translation="MVGLSAHHRPLGCRLLILFCLLHPGASGQPYPTSNTAGEEALSV
                     QGVRGSSVELECRTGPAPMAVLWSFTPLGSLVLQPVAVTSGASSKVESGALALGVVSL
                     RNSSLVIEELREGARGHFLCQTLLVSGGQVHTAYLYLMLTVLVPVSKPRVQLNDPSPV
                     EGVSVVATCAVREGTEPLTFSWHHHMPQGPGEVLVGLSEPRLQLDPVNRTHLGWYTCS
                     VSNVVNQLKSDGAFLDVIYGPDKPVITVEPLGFSEDGFWASEREEVTLSCLAASNPPS
                     HYVWFRDDSQIHTGPTYIIASASRTHTGLYTCLAHNRHLDTHTQTTVQLIIYYPPEGQ
                     PSCAVLPTLGVVTLLCTWPGGFPNAQLHWEGPQGIGPSASGNVTWSYTTTGLPNGSIF
                     SCTGQHPTLAMPIFCRVTLWEPPGSPTCWTTATVGDQYIMLSCEWPGGEPPAMLSWLD
                     RQQSLGDLGSSQAVHLLQAQSDLAGREFTCQGSHPLTAPGSHCRLRLEVPQLTVAEPR
                     VSVLEGEEAWLGCALQRGTPPAQLLWLGPQQQQLEGSTPGFILHPEGTHLRLQVRDAD
                     PAHHRGTYQCVARNALGNSSQSVLLEVLRYPTPPNVTISRLTYRRQRREVQLQWAIYG
                     PGNLTGFLVQQRASVPSSEAGAWEVAASDIEPESRDRRLGGLDPGVLYAFRILAMNHH
                     TAGYPSEVKTPVDPAFSAYPAVLGAAGTGVVVALATSLLVFQYAARHPHTFPCLSRLL
                     VPMEHEQQQRASRESIEAPAGTETASTTSSSDPIQESIDAPVNVTITVTATP"
     exon            186..536
                     /gene="Vsig10l2"
                     /gene_synonym="Gm1113"
                     /inference="alignment:Splign:2.1.0"
     exon            537..812
                     /gene="Vsig10l2"
                     /gene_synonym="Gm1113"
                     /inference="alignment:Splign:2.1.0"
     exon            813..1088
                     /gene="Vsig10l2"
                     /gene_synonym="Gm1113"
                     /inference="alignment:Splign:2.1.0"
     exon            1089..1337
                     /gene="Vsig10l2"
                     /gene_synonym="Gm1113"
                     /inference="alignment:Splign:2.1.0"
     exon            1338..1595
                     /gene="Vsig10l2"
                     /gene_synonym="Gm1113"
                     /inference="alignment:Splign:2.1.0"
     exon            1596..1886
                     /gene="Vsig10l2"
                     /gene_synonym="Gm1113"
                     /inference="alignment:Splign:2.1.0"
     exon            1887..2183
                     /gene="Vsig10l2"
                     /gene_synonym="Gm1113"
                     /inference="alignment:Splign:2.1.0"
     exon            2184..2306
                     /gene="Vsig10l2"
                     /gene_synonym="Gm1113"
                     /inference="alignment:Splign:2.1.0"
     exon            2307..2331
                     /gene="Vsig10l2"
                     /gene_synonym="Gm1113"
                     /inference="alignment:Splign:2.1.0"
     exon            2332..2384
                     /gene="Vsig10l2"
                     /gene_synonym="Gm1113"
                     /inference="alignment:Splign:2.1.0"
     exon            2385..2482
                     /gene="Vsig10l2"
                     /gene_synonym="Gm1113"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggttggca acctgagcct gatccccatt cttccaagac tcctgtgccc tgaagagagg
       61 gagttgggag ttaggcagaa gcctcaggtg ccctgatggg gccatggtgg gtctgagtgc
      121 tcatcacaga ccattaggct gcaggctgct gatactcttc tgcctactgc atccaggggc
      181 ctcaggccaa ccctatccaa cctcgaacac cgctggggag gaggctttgt ctgtccaggg
      241 agtgcggggc agctctgtgg agctagagtg tagaaccggg cctgccccga tggcagtcct
      301 ttggagcttc actccgctgg gttccctggt tctccaacct gtggctgtca ccagtggagc
      361 ctcttcgaag gtggaatccg gggcattagc tctgggggtc gtgagtctga ggaacagcag
      421 cctggtgata gaggagctcc gagagggtgc ccgtggccac ttcctgtgcc agaccttgct
      481 cgtgtccggt ggccaggtcc acacagccta cttgtacctc atgctcaccg tgctggtgcc
      541 tgtgtctaag cctcgggtgc aactgaatga cccatcccca gtagagggtg tctccgtggt
      601 ggctacttgt gctgtgaggg agggcacaga gccactgacc ttctcctggc accatcacat
      661 gccccaaggc cctggagagg tcctggtggg tctttcagag ccaaggctcc agctagatcc
      721 agtcaaccgg acccacctag gctggtacac ctgcagtgtg agcaacgtag tcaaccagct
      781 caagagtgat ggagccttcc tagatgtcat ctatggtcca gacaagcctg tgatcactgt
      841 ggaaccactg ggattctctg aagatgggtt ctgggccagt gagagagagg aggtgacact
      901 tagctgcctg gctgcatcca atccacctag tcactatgtg tggttccgtg atgactctca
      961 gatccacact gggcccacct acatcattgc cagtgccagc cgcacccaca cgggcctgta
     1021 cacctgcctg gctcacaaca ggcacctaga tacccacacc cagaccactg tccagctcat
     1081 catctactat ccccctgaag ggcagccctc ctgtgccgtg ctccccaccc ttggggttgt
     1141 gaccctgcta tgcacctggc ctggggggtt tccaaatgct caacttcact gggaagggcc
     1201 ccaggggatt ggtccaagtg cctcgggcaa tgtcacctgg agttatacaa ccaccggact
     1261 tccaaatggc agcatcttca gctgtaccgg acagcaccct accttggcta tgcccatctt
     1321 ctgcagggtc actctctggg aacctcctgg gagtcctacc tgttggacca cagccacagt
     1381 aggtgaccag tacatcatgc tgagctgtga gtggcctgga ggcgaacctc ctgcgatgct
     1441 gagctggctg gacagacagc agtccctggg tgacctgggc tcttcgcagg ctgtgcacct
     1501 cctgcaggct cagagtgatc tggcaggcag agagttcacc tgccagggtt cccacccact
     1561 cacggctcct ggctcccact gccggctaag gctggaagtc ccacagctga cagtggctga
     1621 accccgagtg tcagtactgg agggcgaaga ggcctggctg ggctgtgctc tccagcgggg
     1681 tacaccacct gctcagctcc tctggctggg accccagcaa cagcagttgg aaggaagtac
     1741 tcctggattc atactacacc ctgagggtac ccacttgcgc cttcaagtcc gagatgctga
     1801 cccagcacac cacaggggca cttaccaatg tgtggcccgc aatgccttgg gcaacagcag
     1861 ccagagtgtg ttgctggagg tcctgaggta tccaactcct cccaacgtca ccatcagccg
     1921 actgacctac aggcgacaac ggagagaggt gcagctgcag tgggccatct acggccctgg
     1981 caacctgaca ggctttctgg tgcagcagag ggccagtgtc cccagctcag aagctggtgc
     2041 ttgggaggta gccgctagtg acattgagcc agagagcagg gaccggcgtc tgggagggtt
     2101 ggacccagga gtcctttatg ccttccgtat cctggctatg aatcaccaca ctgcaggata
     2161 tccttcggag gtgaagacac cagtggaccc tgccttcagt gcctacccag ctgtactagg
     2221 agctgcaggc acaggagtcg tggtggcatt ggcgacctct ttgttggtgt tccagtatgc
     2281 tgcccggcac ccacacactt tcccctgcct gagtcggctg cttgttccta tggagcacga
     2341 acagcaacag agggcctcca gggaaagcat cgaggcccca gcaggcactg aaacagcatc
     2401 taccacctca agttcagacc ctatacaaga atccattgat gctccagtaa atgtcaccat
     2461 cacagtgact gcaacaccat ag
//
