LOCUS       NM_001033311            4054 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus V-set and immunoglobulin domain containing 10
            (Vsig10), mRNA.
ACCESSION   NM_001033311 XM_620251 XM_889868 XM_898723 XM_898729 XM_915383
            XM_923702
VERSION     NM_001033311.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4054)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY082706.1, CJ057085.1, AC110234.11, AK140339.1 and BY668205.1.
            
            On Jun 7, 2007 this sequence version replaced NM_001033311.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data because no single transcript was available
            for the full length of the gene. The extent of this transcript is
            supported by transcript alignments and orthologous data.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849374,
                              SAMN00849375 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-52                BY082706.1         2-53
            53-621              CJ057085.1         2-570
            622-901             AC110234.11        39247-39526         c
            902-1156            AC110234.11        35853-36107         c
            1157-3368           AK140339.1         1060-3271
            3369-3721           AC110234.11        19641-19993         c
            3722-4054           BY668205.1         83-415
FEATURES             Location/Qualifiers
     source          1..4054
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 56.88 cM"
     gene            1..4054
                     /gene="Vsig10"
                     /note="V-set and immunoglobulin domain containing 10"
                     /db_xref="GeneID:231668"
                     /db_xref="MGI:MGI:2448533"
     exon            1..238
                     /gene="Vsig10"
                     /inference="alignment:Splign:2.1.0"
     CDS             178..1854
                     /gene="Vsig10"
                     /note="V-set and immunoglobulin domain-containing protein
                     10"
                     /codon_start=1
                     /product="V-set and immunoglobulin domain-containing
                     protein 10 precursor"
                     /protein_id="NP_001028483.2"
                     /db_xref="CCDS:CCDS19603.2"
                     /db_xref="GeneID:231668"
                     /db_xref="MGI:MGI:2448533"
                     /translation="MAGLRVLLCLGALLARQGSAGLQLLLNPSRANLSVRPNSEVLPG
                     IHPDLEAVAIGEVHDNVTLRCGSASGSRGLVTWYRNDSEPAFLVSFNSSLPPAAPRFS
                     LEDAGALRIEALRLEDDGNYTCQEVLNETHWFPVRLRVASGPAYVEVNISATGTLPNG
                     TLYAARGSQVDFNCCSAAQPPPEVEWWIQTHSIPEFLGKNLSANSFTLMLMSQNLQGN
                     YTCSATNVLSGRQRKVTTELLVYWPPPSAPQCSVEVSSESTTLELACNWDGGYPDPTF
                     LWTEEPGGTIMGNSKLQTLSPAQLLEGKKFKCVGNHILGPESGASCVVKLSSPLLPSQ
                     PMRTCFVGGNVTLTCEVSGANPPARIQWLRNLTQPAIQPSSHYIITQQGQSSSLTIHN
                     CSQDLDEGFYYCQAENLVGVRATNIWLSVKEPLNIGGIVGTVVSLLLLGLAVVSGLTL
                     YYSPAFWWKGGSTFRGQDMGDVMVLVDSEEEEEEEEEEEEKEDVAEEVEQETNETEEL
                     PKGISKHGHIHRVTALVNGNLDRMGNGFQEFQDDSDGQQSGIVQEDGKPV"
     exon            239..319
                     /gene="Vsig10"
                     /inference="alignment:Splign:2.1.0"
     exon            320..601
                     /gene="Vsig10"
                     /inference="alignment:Splign:2.1.0"
     exon            602..901
                     /gene="Vsig10"
                     /inference="alignment:Splign:2.1.0"
     exon            902..1156
                     /gene="Vsig10"
                     /inference="alignment:Splign:2.1.0"
     exon            1157..1444
                     /gene="Vsig10"
                     /inference="alignment:Splign:2.1.0"
     exon            1445..1555
                     /gene="Vsig10"
                     /inference="alignment:Splign:2.1.0"
     exon            1556..1571
                     /gene="Vsig10"
                     /inference="alignment:Splign:2.1.0"
     exon            1572..1798
                     /gene="Vsig10"
                     /inference="alignment:Splign:2.1.0"
     exon            1799..4054
                     /gene="Vsig10"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gttgttttcc gccagtcggg cgggctgggc gcaggggcgg ggcgcgtgcc ccagaggcga
       61 tcgtcggggt tcggcgggag catcctagcc ggggagcccc tcgccgctgg ccggggagtc
      121 ctaggagccc cgtgcacccc gagctgcgcg ctttcccagg agtagatctc tggagccatg
      181 gccggactcc gcgtcctgct gtgcctcggg gcgctgctgg cccgccaggg ctccgcagga
      241 ctccagcttc ttctgaaccc atcccgtgcc aacttgtctg tccggcccaa ctctgaggtc
      301 ttgcctggca tacatccaga cttagaggct gtggctatcg gcgaagtcca cgacaacgtt
      361 actctacgct gtggcagcgc gtcgggatcc aggggcctgg tgacctggta caggaatgac
      421 tctgagcccg ccttcctggt ctccttcaat tccagcctcc ctccggctgc tccccgtttc
      481 tctctagagg atgcaggtgc cctgcgtatt gaggcactga gactagagga tgacggcaac
      541 tacacctgcc aggaggttct gaatgagacc cactggttcc ctgtgcgtct tcgggtggcc
      601 agtggccctg cctacgtgga agttaacatc tcagccactg gcaccctccc caacggcacg
      661 ctgtacgcag ccaggggctc ccaggtggac ttcaactgct gcagtgccgc gcagcctccg
      721 cccgaggtgg agtggtggat ccagacccac agcatcccgg agttccttgg aaagaacctg
      781 tcggccaaca gcttcacgct gatgctcatg tcccaaaacc tccaaggcaa ctacacgtgc
      841 tcagccacca acgtgctcag cgggagacag cgaaaggtga ccaccgagct cctggtctac
      901 tggccccctc cgtcagctcc tcagtgctca gtggaggtgt cttcagaatc gactaccctg
      961 gaactcgcct gtaactggga cgggggctac cctgacccga ccttcttgtg gaccgaggaa
     1021 cctggaggaa cgatcatggg gaactcaaag ctgcaaacac tgagcccggc gcagctgttg
     1081 gagggcaaga agttcaaatg cgttgggaac cacatactgg gacctgagtc tggagccagc
     1141 tgtgtggtaa agctctcgag ccccttactg ccgtctcagc ccatgagaac ttgcttcgtg
     1201 gggggcaacg tgactctcac ctgcgaagtg tcaggagcca acccacctgc gaggatccag
     1261 tggctgagga acctcacgca gcccgccatc cagcccagca gccactacat catcacccag
     1321 cagggccaaa gctcctctct caccatccac aactgctcac aggacctgga tgaaggcttt
     1381 tactattgcc aggccgagaa cctcgtgggg gtgagggcaa caaacatctg gttgagtgtg
     1441 aaagaaccgc tgaacatcgg gggcatcgtg ggcactgtgg tgagcctcct cctgctggga
     1501 ctggccgttg tttcaggcct cactctgtat tacagcccgg ctttctggtg gaagggaggg
     1561 agcacattca ggggacagga catgggtgat gtcatggttt tggtggattc ggaagaggag
     1621 gaggaagaag aagaggagga ggaggagaag gaagatgttg ctgaagaggt ggaacaggag
     1681 acaaatgaga cagaggagtt gccaaaaggg ataagcaagc atggacacat tcacagggtg
     1741 actgctctgg tcaacgggaa cttagaccgc atggggaatg gattccagga gtttcaggat
     1801 gacagtgatg ggcagcagag tggcattgtt caagaggatg gcaagccagt ttgatgaaga
     1861 ggacgattca ctgttggtgc tgtcttgccc cccatctcac cgtgctgccc tggggagctt
     1921 gtgttaggga ctgctggggt ctctgcagca caggcacagc atctcttctt ccgtctgtca
     1981 tctcccactg acttcatttg gtgtgggttc acctcagcag tgtgaagtgc actgagaagg
     2041 agcagccggt gtggggcaaa gctgcagtgg ccgtagtgga gtctgagggg cccacttggc
     2101 tgtgatactg actctaccca ggtgatgtac tgtgacagac actgattggg gactggggtg
     2161 gggtggggca cttggtacct gtgcactgtg ccattagtca aggtttgtag acagcttacc
     2221 caacacgaat atggacatga ggaaccttcc tggcagaggg gaggggtcag ctaccaaaag
     2281 gcagttggat ttgggcccaa ggcttgaatt cttttattgt tttgcgtctg ttttcctatc
     2341 aagaacaccc ctgaaacagt acctactttc caggctcctg agagatggag gaggtagttc
     2401 ggggtgtagg agtgcctagg gaggggttcc acagagctac tgcaggggcc atcattatag
     2461 actctcagct ccgcccaccc caactatgct ttttccccta gagaggattg cacctctcct
     2521 ctccttcacg gtgtacaggc agagctgcat ctggttatga aagcctaagt gacgaaccta
     2581 aggcttctct ttcctcatgt ctcctgtgct aacagagcat cacctgataa cgaactggac
     2641 acacggtcca tttggactta gtgtctgtgt tctggaaatg ggagtatatg tttccatcct
     2701 acttactggg ccagtaagtt tcaaaagaaa atagtgggtg atgactttag cttgggacag
     2761 ctgggttctg gggattttta ttttatttta tttttttaaa atttcatcta aacattctga
     2821 agtcagggat cttctaaggg tgcagtaggt ctgtactaac catgaaaatc tgacttgaaa
     2881 tttgcactct gtacttgggt acatctcttg ggcacatcct gctcagacag gacaagatct
     2941 aaggctttaa ggacttccta acactggggc cggaggtttc ctgtggagct ggttaacaga
     3001 agtacctgca cgatgtggga gaggttgtct ggtctctctg aatgcagggg ctaaagtgaa
     3061 gaaaccgctc cccttgtggc ccaccctgag gtcagggtgt ggaggagtcc acctggctgt
     3121 gaattgggag cccttgggga tggctatgac ctgttctctt gcttagtggt gcctcaggca
     3181 ctctgtcatt tcgtggtggg atactcaggt tgccttcagt ccttcgagct ggtctttcct
     3241 ttgaagcctg atgacaagag ttcctgagtt tgtctgcaac tcagaggcaa ctttaaaaga
     3301 gaagttagag gggaagcggc tatctgggaa catggtgaat gtttggtgag atcactcggt
     3361 gcttcccgta acttcctctt atgtgcacac ctggcggtag gaaatacttg agggtttttt
     3421 ccactagcaa atgagagctt caagggcttg gtgccgaccg ctgttctcaa gccctggcca
     3481 gttaccactg tctattttat cagcctgtgt gcacatttat aaaggggcag ttcagtttgg
     3541 agcccaggca ccaagggctt tgttttaagg ctttgttaaa aactggagcc cacatccctt
     3601 ctttccgttg atgccatcca tacccagatc tcaaggcata tgtgttaaat gccaaagtac
     3661 aatttgtgca ttggtcttta aaaaaataat tcttatctgc atgtattagt taactgatga
     3721 actccacttg ttagaactgg gaagaaaacc acttcatggt tgttgttttt ttgtttttcc
     3781 gagacagggt ttctctgtgt agccctggct gacctggaac tcactctgta gaccaggctg
     3841 gcctcaaact caaaagatat agaaggtatc ctcctcactg ggtacagcaa tcaaacttct
     3901 caccacagaa ctggctacca gctactgcaa agaaaaactg cagatgggtc aacgtggttg
     3961 accttaccat ttcgtaggaa aaaaattggg agaaattagt tctaaggtta tacattttta
     4021 agactttgga ataaagttac tttttaaaaa acat
//
