LOCUS       NM_001199677            1561 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus vacuolar protein sorting 37D (Vps37d), transcript
            variant 1, mRNA.
ACCESSION   NM_001199677
VERSION     NM_001199677.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK,
            Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L,
            Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre
            JM, Doe B, Dolan ME, Edie SM, Fuchs H, Gailus-Durner V, Galli A,
            Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ,
            Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall
            S, Mason J, McElwee ML, Newbigging S, Nutter LM, Peterson KA,
            Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR,
            Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana
            S, Warren J, Wendling O, West DB, Wong L, Yoshiki A, MacArthur DG,
            Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC,
            Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL,
            de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown
            SD, Adams DJ, Lloyd KC, McKerlie C, Beaudet AL, Bucan M and Murray
            SA.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. PMID: 29144450]
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Koscielny G, Yaikhom G, Iyer V, Meehan TF, Morgan H,
            Atienza-Herrero J, Blake A, Chen CK, Easty R, Di Fenza A, Fiegel T,
            Grifiths M, Horne A, Karp NA, Kurbatova N, Mason JC, Matthews P,
            Oakley DJ, Qazi A, Regnart J, Retha A, Santos LA, Sneddon DJ,
            Warren J, Westerberg H, Wilson RJ, Melvin DG, Smedley D, Brown SD,
            Flicek P, Skarnes WC, Mallon AM and Parkinson H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AY081953.2 and BU704550.1.
            
            [WARNING] On Nov 27, 2023 this sequence was replaced by
            NM_001199677.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and it encodes the longer protein (isoform 1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY081953.2, BC044789.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1529              AY081953.2         1-1529
            1530-1561           BU704550.1         386-417
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 74.98 cM"
     gene            1..1561
                     /gene="Vps37d"
                     /gene_synonym="Wbscr24"
                     /note="vacuolar protein sorting 37D"
                     /db_xref="GeneID:194309"
                     /db_xref="MGI:MGI:2159402"
     exon            1..205
                     /gene="Vps37d"
                     /gene_synonym="Wbscr24"
                     /inference="alignment:Splign:2.1.0"
     CDS             68..853
                     /gene="Vps37d"
                     /gene_synonym="Wbscr24"
                     /note="isoform 1 is encoded by transcript variant 1;
                     vacuolar protein sorting-associated protein 37D;
                     Williams-Beuren syndrome critical region protein 24;
                     ESCRT-I complex subunit VPS37D; williams-Beuren syndrome
                     region protein 24 homolog; Williams-Beuren syndrome
                     chromosome region 24 homolog"
                     /codon_start=1
                     /product="vacuolar protein sorting-associated protein 37D
                     isoform 1"
                     /protein_id="NP_001186606.1"
                     /db_xref="CCDS:CCDS57388.1"
                     /db_xref="GeneID:194309"
                     /db_xref="MGI:MGI:2159402"
                     /translation="MYRARAARAGPEPGSPGRFGILSTGQLRDLLQDEPKLDRIVRLS
                     RKFQGLQLERDACLASNYALAKENLALRPRLEMGRTALAIKYQELREVAENCADKLQR
                     LEKSMHRWSPQCALGWLQAELEEAEQEAEVQMEQLLLGEQSLEAFLPAFQRGRALAHL
                     RRTQAEKLQEVLRRRERSAQPAPTTAAAAAAAATAMDPPKPFPAAAVLPTGAARGPPP
                     AVPRSLPPLDSRPVPPVKGSPGCPFGPAPLLSPRPSQPEPPHR"
     exon            206..377
                     /gene="Vps37d"
                     /gene_synonym="Wbscr24"
                     /inference="alignment:Splign:2.1.0"
     exon            378..460
                     /gene="Vps37d"
                     /gene_synonym="Wbscr24"
                     /inference="alignment:Splign:2.1.0"
     exon            461..1544
                     /gene="Vps37d"
                     /gene_synonym="Wbscr24"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggagccgggg cggagcgggg ccgatcgggc cgagccagca gccgagctgg gggcgcgggc
       61 gggcggtatg taccgggccc gggcggcgcg ggcggggccg gagcccggca gcccggggcg
      121 ctttgggatc ctcagcaccg ggcagctccg ggatctgctt caagatgagc ccaagctgga
      181 ccggatcgtg cggctcagca ggaagttcca gggtctgcag ctggaacggg atgcctgctt
      241 ggcctctaac tacgcgctgg ccaaggagaa cctggccttg cggccccgcc tggagatggg
      301 tcggacagcc ctggccatca agtaccaaga gcttcgagag gtggctgaga actgcgcaga
      361 caaactgcag agactggaga agagcatgca tcgctggagc ccccaatgtg cgctgggctg
      421 gctgcaggct gagctggaag aggctgagca ggaggctgag gtccagatgg agcagctgct
      481 gctgggggaa cagagcctgg aggccttcct gccagccttc cagaggggcc gtgccctggc
      541 ccacctgagg cggacacagg ccgagaaact acaggaggtg ctgaggcgtc gagagcgctc
      601 tgcccagccg gcccccacaa ctgctgctgc tgctgccgcc gccgccaccg ccatggatcc
      661 ccccaaaccc ttccctgctg ctgccgtcct gcccactggg gccgcccggg gaccacctcc
      721 agcagtaccc cggagcctgc cccccttgga ctcccgccca gtgcccccag tgaagggctc
      781 tcccgggtgc ccttttggcc cagccccttt gctgagccct cgaccctctc agcctgaacc
      841 ccctcatcgg taggagccag ggtgaggcct cccagcgggg gtccagacaa acttgattca
      901 tggctcctcc tcctccccca ctgcctgggt ggggggaggg gcaggcccct ccccctagcc
      961 tcaggcaggc ccagggccct ggaggctgag ctggggaaga ggggctcccc gaagaggccc
     1021 gaagagggct gggggtgggg tgggcagggt gctggactcc ggtcaccaag gaaactctgc
     1081 ctttttattt tattttttcg tctccccggc tggggcctcc agggtgccaa gccaggtcct
     1141 caaatgaaaa agaactttat ggggtcctgc ttcttccaga ggggtcttgc ttgggggcct
     1201 gtcgcaccct gccacactac tgggctcgaa caactgccaa ggcttactgg attgttctca
     1261 tatcctgagc taacccttcc tgcagtttgg gggccctccg cctaggagcc gggcccaggg
     1321 acacccccaa tggccttgca gctggccctg gggcaaggta ggacagaggc ttctgacctg
     1381 cacaggtgag agcctgccac ccccaggaaa gaccattctg tatttttctg tccctgtctc
     1441 cttagaatgg aacctttttg agggcaggtc cttgtctttg tatgttctgt ccccagcccc
     1501 gcctcctagg ggctgtcaat aaatgtgctg atggatgacg gtgaaaaaaa aaaaaaaaaa
     1561 a
//
