LOCUS       NM_001013607             672 bp    mRNA    linear   ROD 29-JUL-2024
DEFINITION  Mus musculus vitelline membrane outer layer 1 homolog (chicken)
            (Vmo1), mRNA.
ACCESSION   NM_001013607 XM_282996
VERSION     NM_001013607.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Peters,L.M., Belyantseva,I.A., Lagziel,A., Battey,J.F.,
            Friedman,T.B. and Morell,R.J.
  TITLE     Signatures from tissue-specific MPSS libraries identify transcripts
            preferentially expressed in the mouse inner ear
  JOURNAL   Genomics 89 (2), 197-206 (2007)
   PUBMED   17049805
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL592547.9.
            
            On Mar 27, 2005 this sequence version replaced XM_282996.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BY752958.1, BY594652.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849383,
                                           SAMN00849386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-206               AL592547.9         120021-120226
            207-322             AL592547.9         120341-120456
            323-672             AL592547.9         120772-121121
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 42.99 cM"
     gene            1..672
                     /gene="Vmo1"
                     /gene_synonym="Gm741"
                     /note="vitelline membrane outer layer 1 homolog (chicken)"
                     /db_xref="GeneID:327956"
                     /db_xref="MGI:MGI:2685587"
     exon            1..206
                     /gene="Vmo1"
                     /gene_synonym="Gm741"
                     /inference="alignment:Splign:2.1.0"
     CDS             15..620
                     /gene="Vmo1"
                     /gene_synonym="Gm741"
                     /note="vitelline membrane outer layer protein 1 homolog"
                     /codon_start=1
                     /product="vitelline membrane outer layer protein 1 homolog
                     precursor"
                     /protein_id="NP_001013625.1"
                     /db_xref="CCDS:CCDS24951.1"
                     /db_xref="GeneID:327956"
                     /db_xref="MGI:MGI:2685587"
                     /translation="MELQAGARLLLLLGVMCYGHAQIQVHVEPRYASIVDVTNGGTWG
                     DWAWPEMCPDGYFASGFSVKVEPPQGIPGDDTALNGIRLHCTRGNSQKNTHVVESQSG
                     SWGSWSEPLWCPGTSFLVAFCLRVEPFTFPGDNTGVNNVRFRCSDGVELEGPGLNWGD
                     YGEWSNSCPKGVCGLQTKIQKPRGLRDDTALNDIRIFCCAS"
     exon            207..322
                     /gene="Vmo1"
                     /gene_synonym="Gm741"
                     /inference="alignment:Splign:2.1.0"
     exon            323..672
                     /gene="Vmo1"
                     /gene_synonym="Gm741"
                     /inference="alignment:Splign:2.1.0"
     regulatory      652..657
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Vmo1"
                     /gene_synonym="Gm741"
                     /note="hexamer: ATTAAA"
     polyA_site      672
                     /gene="Vmo1"
                     /gene_synonym="Gm741"
                     /note="major polyA site"
ORIGIN      
        1 ataggtcatg caggatggag ttgcaggctg gagccaggct gttactgctg ctgggggtga
       61 tgtgctatgg acatgcacag attcaagttc acgtagaacc acgctatgca tcgatcgttg
      121 acgtgaccaa cggtggtacc tggggtgatt gggcctggcc tgagatgtgt cctgatggat
      181 actttgccag tgggttctct gtcaaggtgg agccccctca aggcattcct ggagatgaca
      241 cagctctgaa tgggatccgg ctacactgca ctcgagggaa ctcacagaaa aacacccacg
      301 tcgtggagtc ccagtccgga agctggggtt catggagtga gcctctgtgg tgtcctggca
      361 ctagcttctt agtggctttc tgcctccggg tggagccatt tacattccca ggggacaaca
      421 ctggagtgaa caacgtgcgc ttccgttgct cagacggcgt ggagctggag gggcctgggc
      481 tgaactgggg agactacgga gagtggagca actcatgtcc caaaggtgtc tgtggcttgc
      541 agaccaaaat ccagaagcca agaggcctcc gagatgacac tgcacttaat gacatcagaa
      601 tattctgctg tgccagctga tgcggtcgct ctgccagtac tgtcttttac cattaaagct
      661 tcttggcctt gg
//
