LOCUS       NM_001385269            3195 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus vomeronasal 2, receptor 88 (Vmn2r88), transcript
            variant 3, mRNA.
ACCESSION   NM_001385269 XM_030247960
VERSION     NM_001385269.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3195)
  AUTHORS   Isogai Y, Wu Z, Love MI, Ahn MH, Bambah-Mukku D, Hua V, Farrell K
            and Dulac C.
  TITLE     Multisensory Logic of Infant-Directed Aggression by Males
  JOURNAL   Cell 175 (7), 1827-1841 (2018)
   PUBMED   30550786
REFERENCE   2  (bases 1 to 3195)
  AUTHORS   Young JM and Trask BJ.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
REFERENCE   3  (bases 1 to 3195)
  AUTHORS   Matsunami H and Buck LB.
  TITLE     A multigene family encoding a diverse array of putative pheromone
            receptors in mammals
  JOURNAL   Cell 90 (4), 775-784 (1997)
   PUBMED   9288756
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122858.2.
            
            On Jul 14, 2020 this sequence version replaced XM_030247960.1.
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-206               AC122858.2         94692-94897
            207-489             AC122858.2         96729-97011
            490-1293            AC122858.2         97411-98214
            1294-1518           AC122858.2         99030-99254
            1519-1642           AC122858.2         100396-100519
            1643-3195           AC122858.2         101666-103218
FEATURES             Location/Qualifiers
     source          1..3195
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 26.51 cM"
     gene            1..3195
                     /gene="Vmn2r88"
                     /gene_synonym="V2r13; V2r3"
                     /note="vomeronasal 2, receptor 88"
                     /db_xref="GeneID:669149"
                     /db_xref="MGI:MGI:1316662"
     CDS             1..2550
                     /gene="Vmn2r88"
                     /gene_synonym="V2r13; V2r3"
                     /note="isoform 3 precursor is encoded by transcript
                     variant 3; vomeronasal 2, receptor, 13; vomeronasal 2,
                     receptor, 3; vomeronasal organ family 2, receptor, 3;
                     vomeronasal organ family 2, receptor, 13; vomeronasal
                     receptor Vmn2r88"
                     /codon_start=1
                     /product="vomeronasal 2, receptor 88 isoform 3 precursor"
                     /protein_id="NP_001372198.1"
                     /db_xref="GeneID:669149"
                     /db_xref="MGI:MGI:1316662"
                     /translation="MKQLCAFTISFLFLKFSLILCCLTEASCFWRIKNSEDNDGDLQR
                     ECHFYLGAVDKPIEDNFYNSLLKFRIAASEYEFLLVMFFATDEINKNPYLLPNITLMF
                     SIIGGNCHDLLRGLDQAYTQINGHMNFVNYFCYLDDSCAIGLTGPSWKTSLKLAMHSS
                     MPLVFFGSFNPNLHDHDRLHHVHQVATKDTHLSHGIVSLMFHFRWTWIGLVISDDDKG
                     IQFLSDLREESQRHGICLAFVNMIPENMQIYMTRATIYDKQIMTSLAKVVIIYGEMNS
                     TLEVSFRRWENLGARRIWITTSQWDVITNKKEFTLNLFHGTITFAHRRFEIPKFKKFM
                     QTMNTAKYPVDISHTILEWNYFNCSISKNSSKMDHITFNNTLEWTALHNYDMVMSDEG
                     YNLYNAVYAVAHTYHEHIFQQVESQKKAKPKRFFTVCQQVSSLMKTRVFTNPVGELVN
                     MKHRENQCTEYDIFLIWNFPQGLGLKVKIGSYLPCFPQRQELHISDDLEWAMGGTSVP
                     SSVCSVACTAGFRKIHQKETADCCFDCVQCPENEVSNETADMEQCVKCPYDKYANIEK
                     THCLSRAVSFLAYEDPLGIALGCIALSFSAITILVLITFLKYKDTPIVKANNRILSYI
                     LLISLVFCFLCSLLFIGHPNQVSCVLQQTTFGVFFTVSVSTVLAKTITVVMAFKLTTP
                     GRRMREMLVTGAPKLVIPICTLIQFVLCGIWLITSPPFIDRDIQSEHGKIVILCNKGS
                     VIAFHVVLGYLGSLALGSFTLAFLARNLPDTFNEAKFLTFSMLVFCSVWITFLPVYHS
                     TRGKVMVVVEVFSILASSAGLLMCIFVPKCYVILVRPDSNFIRKYKDKFRY"
     exon            1..206
                     /gene="Vmn2r88"
                     /gene_synonym="V2r13; V2r3"
                     /inference="alignment:Splign:2.1.0"
     exon            207..489
                     /gene="Vmn2r88"
                     /gene_synonym="V2r13; V2r3"
                     /inference="alignment:Splign:2.1.0"
     exon            490..1293
                     /gene="Vmn2r88"
                     /gene_synonym="V2r13; V2r3"
                     /inference="alignment:Splign:2.1.0"
     exon            1294..1518
                     /gene="Vmn2r88"
                     /gene_synonym="V2r13; V2r3"
                     /inference="alignment:Splign:2.1.0"
     exon            1519..1642
                     /gene="Vmn2r88"
                     /gene_synonym="V2r13; V2r3"
                     /inference="alignment:Splign:2.1.0"
     exon            1643..3195
                     /gene="Vmn2r88"
                     /gene_synonym="V2r13; V2r3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagcagc tctgtgcttt cactatttca tttttgtttc tgaagttttc tctcatcttg
       61 tgctgtttga ctgaagcaag ttgcttttgg aggataaaga atagtgaaga taatgatgga
      121 gatttgcaaa gggaatgtca tttttacctt ggggcagttg ataaaccaat tgaagataat
      181 ttttataatt cacttttaaa gtttagaatt gcagcaagtg aatatgagtt tcttctggta
      241 atgttttttg ctactgatga gatcaacaag aatccttatc ttttacccaa cataactttg
      301 atgttctcca tcattggtgg aaactgtcat gatttattga gaggtttgga tcaagcatat
      361 acacaaataa atggacatat gaattttgtt aattatttct gttatttaga tgattcatgt
      421 gccataggtc ttacaggacc atcatggaaa acatccttaa aactggcaat gcattcttca
      481 atgccactgg ttttctttgg atcatttaat cctaacctac atgaccatga ccggctgcac
      541 catgtccatc aagtagccac caaggacaca catttgtccc atggcattgt ctccttgatg
      601 tttcatttta gatggacttg gataggactg gtcatctcag atgatgacaa gggtattcag
      661 tttctctcag atttaagaga agaaagccaa aggcatggga tctgtttagc ttttgttaat
      721 atgatcccag aaaacatgca gatatacatg acaagggcta caatatatga taaacaaatt
      781 atgacgtctt tagcaaaagt tgttatcatt tatggtgaaa tgaactctac actagaagta
      841 agctttagaa gatgggaaaa tttaggtgct cggagaatct ggatcacaac ctcacaatgg
      901 gatgtcatca caaataaaaa agaattcacc cttaatctct tccatgggac tattactttt
      961 gcacaccgca gatttgagat tcctaaattt aaaaaattta tgcaaacaat gaacactgcc
     1021 aaatacccag tagatatttc tcatactata ttggagtgga attattttaa ttgttcaatc
     1081 tctaagaaca gcagtaaaat ggatcatatt acattcaaca acacattgga atggacagca
     1141 ctgcacaact atgatatggt gatgagtgat gaaggttaca atttgtataa tgctgtttat
     1201 gctgtggccc acacctacca tgaacatatt tttcaacaag tagagtctca gaaaaaggca
     1261 aaacccaaaa gatttttcac tgtttgtcag caggtgtctt ccttgatgaa aaccagggta
     1321 tttactaacc ctgttggaga actggtgaac atgaagcata gggaaaatca gtgtacagag
     1381 tatgacattt tcctcatttg gaactttcca caaggccttg gattaaaagt gaaaatagga
     1441 agctatttac cttgttttcc acagagacaa gaacttcata tatctgatga tttggaatgg
     1501 gccatgggag gaacatcagt tccctcctct gtgtgtagtg tggcatgtac tgcaggattc
     1561 aggaaaattc atcagaaaga aacagcagac tgctgctttg attgtgttca gtgcccagaa
     1621 aatgaggttt ccaatgaaac agcagatatg gaacagtgtg tgaagtgtcc atatgataag
     1681 tatgccaaca tagagaaaac ccactgcctc tcaagagctg tatcatttct ggcttatgaa
     1741 gatccattgg ggatagctct aggctgcata gcactgtcct tctcagccat cacaattcta
     1801 gtactaatca catttttgaa gtacaaggat actcccattg tgaaggccaa taaccgcatt
     1861 ctcagctaca tcctgctcat ctctctagtc ttctgctttc tctgctccct gctcttcatt
     1921 ggacatccaa accaggtctc ctgcgtcttg cagcagacca catttggagt atttttcact
     1981 gtgtctgttt ctacagtgtt ggccaaaaca ataactgtgg tcatggcttt caagctcact
     2041 actccaggaa gaagaatgag agagatgttg gtaacagggg cacctaagtt ggtcattccc
     2101 atttgtaccc taatccaatt tgttctctgt ggaatctggt tgataacatc tcctccattt
     2161 attgacagag atatacaatc tgagcatggg aagattgtca ttctttgcaa taaaggctct
     2221 gtcattgcct tccatgttgt cctgggatac ttgggctcct tggctctggg gagcttcact
     2281 ttggctttct tggctaggaa ccttcctgac acattcaatg aagccaaatt cctgactttc
     2341 agcatgctgg tgttctgcag tgtctggatc acctttctcc ctgtctacca tagcaccagg
     2401 gggaaggtca tggtggttgt ggaggttttc tcaatcttgg cttctagtgc agggttgcta
     2461 atgtgtatct ttgtcccaaa gtgttatgtt attttagtta gaccagattc aaattttata
     2521 cggaagtaca aagataaatt tcgttattga aatattcata ctatgaaaat gttagattat
     2581 actcaacata tttttctttg tcttaacaaa agtagtactt aatcttataa aaatttaaat
     2641 aatatacaaa tttgaactta caaacaggac agaactgtct attgtaatac caattacaaa
     2701 actttggtga aaaatggtct cattcataag gacacaattc tgaagatatt gagaaccagg
     2761 aatctcaact gcggaaacgc taccatcatc ctgacctgtg gttttgtgtg taaagcatga
     2821 acttaattaa tgattaatat aaggtgacca tactgactgt gaacactacc atctctgggc
     2881 aagttgttct tgtagttgta agaaaaagct ctgaagacaa catggaagta aagccagtaa
     2941 tcaccattat ccctcatgct ttcatggagt ggctgcatcc aatttcatgc cttggcttca
     3001 ttcaatatac tgtgaccaag gtacataagt aaagaaacac ttttcttaca agcttcttct
     3061 gatcgttgtg ggtttttttg ttttttgttt tttgtttttt gtttgtttgt ttgtattttt
     3121 acatcaacgg aatttaaaat atcaacaaaa tggtaaattg tttctgttga gatttagaat
     3181 atcatcgatt cctga
//
