LOCUS       NM_001103368            2592 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus vomeronasal 2, receptor 80 (Vmn2r80), mRNA.
ACCESSION   NM_001103368 XM_889318 XM_910016
VERSION     NM_001103368.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2592)
  AUTHORS   Tonelli Gombalova Z, Kosuth J, Alexovic Matiasova A, Zrubakova J,
            Zezula I, Giallongo T, Di Giulio AM, Carelli S, Tomaskova L,
            Daxnerova Z and Sevc J.
  TITLE     Majority of cerebrospinal fluid-contacting neurons in the spinal
            cord of C57Bl/6N mice is present in ectopic position unlike in
            other studied experimental mice strains and mammalian species
  JOURNAL   J Comp Neurol 528 (15), 2523-2550 (2020)
   PUBMED   32212159
REFERENCE   2  (bases 1 to 2592)
  AUTHORS   Young JM and Trask BJ.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC153871.5 and
            AC131066.8.
            
            On or before Sep 13, 2007 this sequence version replaced
            XM_910016.1, XM_889318.1.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-215               AC153871.5         141242-141456
            216-507             AC153871.5         160596-160887
            508-1317            AC153871.5         161464-162273
            1318-1543           AC153871.5         163935-164160
            1544-1545           AC153871.5         164161-164162
            1546-1669           AC153871.5         174414-174537
            1670-2592           AC131066.8         72987-73909         c
FEATURES             Location/Qualifiers
     source          1..2592
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 39.72 cM"
     gene            1..2592
                     /gene="Vmn2r80"
                     /gene_synonym="EG624765"
                     /note="vomeronasal 2, receptor 80"
                     /db_xref="GeneID:624765"
                     /db_xref="MGI:MGI:3646321"
     CDS             1..2592
                     /gene="Vmn2r80"
                     /gene_synonym="EG624765"
                     /note="vomeronasal receptor Vmn2r80"
                     /codon_start=1
                     /product="vomeronasal 2, receptor 80 precursor"
                     /protein_id="NP_001096838.1"
                     /db_xref="CCDS:CCDS48616.1"
                     /db_xref="GeneID:624765"
                     /db_xref="MGI:MGI:3646321"
                     /translation="MLFSLFIFFWFLNMPTFTWIIATDICPTDTKYLIHYDGTVVIGA
                     FFPILHNSPISLTTEWKYLPMDTDNYFGMSERNYQLVLAMLFAINEINLNSHILPNTS
                     LGLEIYNLPAIGRNIFRTVFSWLTGLSSVIPNYTCRKESNSAVTLTGVSWKTSETIWT
                     ILDLYKFPQLTFGPFDPVQIDRNQFQSLYQMAPKDTALLSGIASLMLHFSWNWVGLII
                     TDDHRGAQFLSDFRKELDKTRICIAFVQTVLYLEETLLHLLSQNLIHFLESSTADVIV
                     IYGPTSILLTLIESTYRKYNMKKIWIMNSKWFCPNLELYNMIELSHGALIFSPHYEEI
                     TGFKKFMQEATPNKYPEDIFLHLLWYWHFNCSFLHSECKIFENCLQNASLELLPGNIF
                     TMTMTEESYNVYNAVLAVAYSLHEKTLSQIQFQPQANIDRTLLFPWQLHPFLKKIQVK
                     NSVGDHVVLDWKRKADPEYDITNIWNFPTGLSQLVKVGTFVPSAPKGEQLSISEYMIN
                     WPIGFTEIPHSVCSESCSPGFRKVALESKPTCCFDCTPCPDNEISNETDLDQCVHCPE
                     THYANGEKRYCLKKRVTFLSYDDPLGKGITLLSIGFSTLTALFIWVFVDHRGTPIIKA
                     NNRSLSYILLITLILCFLCPLLFIGLPNTAMCIMQQYIFGLLFTVALSTVLAKTITVV
                     MAFKITAPGRKIRWLLTSQVPKFVIPVCTLIQILLSGIWLGTSPPFIDKDCHSEHGHI
                     IILCSKGSYIYFYCTLAYLGVMAFGSYLLAFLSRRLPDRFNESKSLAFSMLVFCSVWV
                     MFLPVYHSTSGKVMVAMEIFSTLASSASILIIVFAPKCYIVLFRPEVNTLTHNRDKRQ
                     HRSKILL"
     exon            1..215
                     /gene="Vmn2r80"
                     /gene_synonym="EG624765"
                     /inference="alignment:Splign:2.1.0"
     exon            216..507
                     /gene="Vmn2r80"
                     /gene_synonym="EG624765"
                     /inference="alignment:Splign:2.1.0"
     exon            508..1317
                     /gene="Vmn2r80"
                     /gene_synonym="EG624765"
                     /inference="alignment:Splign:2.1.0"
     exon            1318..1545
                     /gene="Vmn2r80"
                     /gene_synonym="EG624765"
                     /inference="alignment:Splign:2.1.0"
     exon            1546..1669
                     /gene="Vmn2r80"
                     /gene_synonym="EG624765"
                     /inference="alignment:Splign:2.1.0"
     exon            1670..2592
                     /gene="Vmn2r80"
                     /gene_synonym="EG624765"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgctgttct ctctgtttat tttcttttgg tttttaaaca tgccaacttt cacctggatc
       61 attgcaactg atatctgccc aactgacaca aaatacctaa tacactatga tgggactgtg
      121 gtcattggtg cattttttcc tattttacat aattcaccta taagtctaac aacagaatgg
      181 aaatacttgc ctatggacac ggataattat tttgggatga gtgaacgaaa ttaccaactc
      241 gttttggcca tgttatttgc catcaatgag atcaacttga actcccatat tttaccaaac
      301 acctctcttg gacttgagat ttataatctg ccagctattg gaaggaacat ttttaggact
      361 gtattctctt ggctcacggg tttgagtagc gtgatcccta attatacatg tagaaaagaa
      421 agcaattcag ctgttacact tactggagta tcatggaaaa catctgaaac aatttggacc
      481 atattggatc tttacaaatt tcctcagctt acttttgggc cttttgatcc tgttcagatt
      541 gatagaaacc agtttcaatc tctctaccag atggccccca aagacacagc tctattgtct
      601 ggtattgcct ctttgatgct tcatttcagc tggaactggg tgggactgat catcacagat
      661 gaccacagag gtgctcagtt tctatcagac tttagaaagg agctagacaa aactagaatc
      721 tgcatagctt tcgtgcaaac agtattatat ctggaggaaa ccctacttca tttgctatcc
      781 caaaatctta tccactttct agaatcatca acagcagatg tgattgtaat ttatggaccc
      841 acttctattc tattaacttt aatagaaagc acatatagaa aatacaacat gaaaaaaatt
      901 tggattatga attcaaaatg gttttgtcca aacttggaac tatataatat gatagaatta
      961 tcccatgggg ctctcatttt ctccccccat tatgaggaga ttactggttt caaaaagttt
     1021 atgcaagaag ccaccccaaa caagtaccca gaagatattt ttcttcattt attgtggtac
     1081 tggcatttca actgctcatt tttgcattct gaatgtaaaa tatttgaaaa ctgtctgcag
     1141 aatgcctctt tggaattgtt gccagggaac atttttacaa tgaccatgac tgaagagagt
     1201 tacaatgtgt acaatgctgt gctcgcagtg gcctacagtc tgcatgagaa aacactcagt
     1261 caaatacaat ttcaaccaca ggcaaatatt gataggactc tgttattccc ctggcagctt
     1321 cacccttttc tgaagaagat tcaagtgaaa aattctgttg gtgaccacgt ggttctggac
     1381 tggaaaagga aggcagatcc agagtatgat attaccaaca tttggaattt cccaacaggt
     1441 ctttcacaat tagtgaaagt gggtacattt gttcccagtg ctcccaaagg ggaacaattg
     1501 tcaatatctg aatatatgat taattggccc ataggattta cagagattcc tcactctgta
     1561 tgcagtgaga gctgcagtcc tggattcagg aaagttgccc tggagagcaa gcctacctgt
     1621 tgctttgact gcactccttg cccagacaat gagatttcca atgaaacaga tttggatcag
     1681 tgtgtgcact gtccagaaac tcattatgcg aatggagaga agagatactg cctgaagaaa
     1741 agagtaacat ttctgtccta tgatgatccc ctggggaagg gaatcacact tctttccatt
     1801 ggattctcaa cactcacagc tctttttatt tgggtatttg tagaccacag aggcactcca
     1861 attataaagg ccaataatag atccctcagt tacatactgc tcatcactct catcctctgt
     1921 ttcctctgtc cattgctctt cattggcctt ccaaatacag caatgtgtat aatgcaacag
     1981 tacatatttg gacttctgtt cactgtggcc ctatccactg tgttagccaa aaccatcact
     2041 gtagttatgg ccttcaagat tactgctcca ggaagaaaga taagatggtt gctgacatca
     2101 caggtcccta aatttgtcat tccagtttgc accctgatac aaatacttct ctctggtata
     2161 tggctgggaa catctcctcc atttattgac aaggattgtc actctgaaca tggacacatc
     2221 atcattcttt gcagcaaggg ctcatatatt tacttctact gcactctggc ttacctggga
     2281 gtcatggcct ttgggagtta cctcttggct ttcttgtcca ggagactgcc cgacagattt
     2341 aatgaatcta agtcactggc tttcagcatg cttgtgttct gcagtgtatg ggtcatgttt
     2401 ctccctgtct accacagcac ctctgggaag gtcatggtgg ctatggaaat attctctacc
     2461 ttggcttcca gtgcaagcat tcttatcata gtctttgctc ctaagtgcta cattgttttg
     2521 tttaggccag aggtgaacac acttactcac aacagggata aaagacagca caggagcaaa
     2581 attttacttt aa
//
