LOCUS       NM_001385213            2944 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus vomeronasal 2, receptor 6 (Vmn2r6), mRNA.
ACCESSION   NM_001385213 XM_006501896
VERSION     NM_001385213.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2944)
  AUTHORS   Young JM and Trask BJ.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC113321.19.
            
            On Jul 10, 2020 this sequence version replaced XM_006501896.1.
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-378               AC113321.19        54636-55013
            379-670             AC113321.19        60236-60527
            671-1540            AC113321.19        63193-64062
            1541-1771           AC113321.19        72598-72828
            1772-1895           AC113321.19        80062-80185
            1896-2944           AC113321.19        81527-82575
FEATURES             Location/Qualifiers
     source          1..2944
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 30.15 cM"
     gene            1..2944
                     /gene="Vmn2r6"
                     /gene_synonym="EG620718; EG667069"
                     /note="vomeronasal 2, receptor 6"
                     /db_xref="GeneID:667069"
                     /db_xref="MGI:MGI:3649068"
     exon            1..378
                     /gene="Vmn2r6"
                     /gene_synonym="EG620718; EG667069"
                     /inference="alignment:Splign:2.1.0"
     CDS             131..2878
                     /gene="Vmn2r6"
                     /gene_synonym="EG620718; EG667069"
                     /note="vomeronasal receptor Vmn2r6"
                     /codon_start=1
                     /product="vomeronasal receptor Vmn2r6 precursor"
                     /protein_id="NP_001372142.1"
                     /db_xref="CCDS:CCDS50923.1"
                     /db_xref="GeneID:667069"
                     /db_xref="MGI:MGI:3649068"
                     /translation="MKMASRNKCLILGFTVFLWVELYAQYPHIDQNVTCRLLRKFNLT
                     GYVEVENHSVVIGGIFPVHYRTMPTSDSDEEIESPMCEGFNFRGFRWMKTMIHTIKEI
                     NERKDILPNHTLGYQIFDNCFSTTKAMESSSVFLTGQDEYKSNWRNSTGKFLVGIIGA
                     GGSTMSAAVSRIVGIHNVPQVGYASSSSIFSNDIQFPYILRTIPSDKFQSEAIVNLIR
                     HFGWVWVGAIASDDDYGKYGVRFFREEMERANLCVAFSETIPKVYSNEKMKIAVDAVK
                     SSTAKVIVLYATDIDLCPFVLEVIHHNITDRTWIATEAWITSALIAKPEYFPYFGGTI
                     GFAVPRSVIPGLKEFLYDVHPSKDPNDVLTIEFWQTAFNCTWPNSTVPYNVDHRVNMT
                     GKEDRLYDMSDQLCTGEEKLQDLKSTYLDTSQLRITNNVRQAVYLLAHAIDRFSQADI
                     REEYRESAVLENKPDFESGKLWLYLTKIKFITHDGKKIELGSNGDVLNGSYDILNWHM
                     DNTGEITFVKVGEYKFTSSKYEFVLPKNSTLFWNTESSRLPDSVCTKVCPPGTRKGIH
                     QGQPICCFDCIPCTDGYVSEKPGQRLCDPCGENDWSNAEKNKCVPKHVEFLAYEEALG
                     FTLVILSIFGALVVLAVTVVYVIHRHTPLVKANDRELSFLIQVSLGITVLSSMLFIGK
                     PCNWSCKTRQVTLALGFCLCLSSILGKTVSLFFAYRISISKTRLISMHPIFRKLIVLI
                     CVVGEIGVCTTYLVLEPPSLFKNIEPQNVKIIFECNEGSIEFLCSIFGFDVLLALLCF
                     VTTFVARQLPDNYYEGKCITFGMLVFFIVWISFVPAYLGTKGKFNVAVEIFAILASSY
                     GLLGCVFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSELNSTTVSTVLD
                     E"
     exon            379..670
                     /gene="Vmn2r6"
                     /gene_synonym="EG620718; EG667069"
                     /inference="alignment:Splign:2.1.0"
     exon            671..1540
                     /gene="Vmn2r6"
                     /gene_synonym="EG620718; EG667069"
                     /inference="alignment:Splign:2.1.0"
     exon            1541..1771
                     /gene="Vmn2r6"
                     /gene_synonym="EG620718; EG667069"
                     /inference="alignment:Splign:2.1.0"
     exon            1772..1895
                     /gene="Vmn2r6"
                     /gene_synonym="EG620718; EG667069"
                     /inference="alignment:Splign:2.1.0"
     exon            1896..2944
                     /gene="Vmn2r6"
                     /gene_synonym="EG620718; EG667069"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtctacaaca tgaaattaat tagtcaagag cagcaagccg gttaagcata tacacactcc
       61 aacattcctt caaggtgttt gcttaaaagc tctgtcactt caattcttcc atcaccctca
      121 agctcaccac atgaaaatgg ctagcagaaa taagtgcttg attctgggat ttactgtgtt
      181 tttgtgggtt gaattatacg ctcaatatcc tcatattgac cagaatgtta catgcaggtt
      241 gttgcgcaaa tttaatttga ctggatatgt agaagttgaa aaccattctg ttgttatcgg
      301 aggaatattt cctgttcact ataggaccat gccaacaagt gactctgatg aggaaataga
      361 atcacccatg tgtgaggggt ttaatttccg gggtttccgc tggatgaaaa ccatgatcca
      421 caccatcaag gagattaatg agaggaagga tattttgccc aatcacactc tgggctacca
      481 gatctttgac aactgtttct ccaccaccaa agcaatggag tcatcttcag tgtttctaac
      541 agggcaggac gaatacaaat ctaactggag aaacagcact ggaaaatttc tagttggaat
      601 tattggagca ggaggatcaa ctatgtcagc tgctgtttca agaattgtag ggattcataa
      661 tgtccctcag gtgggatatg cttcttcctc ctcaattttt agtaatgata ttcaatttcc
      721 atacattcta cgcacaatac ccagtgataa attccagtct gaggccatcg tgaatttaat
      781 tagacacttt ggttgggtct gggtaggtgc tattgcatct gatgatgatt atggaaaata
      841 tggagtgaga ttctttaggg aagaaatgga gagggccaac ctttgtgttg ctttctctga
      901 aaccattcca aaagtctact ccaatgagaa aatgaaaata gctgttgatg cagtaaagag
      961 ttccactgcc aaagtcattg tgctttatgc aactgacatt gacctctgcc cctttgtgct
     1021 ggaagtgatt catcataaca taactgacag gacatggata gccaccgaag cctggattac
     1081 ctcagctctc attgcaaagc ctgagtattt cccctatttt ggtggaacta ttggatttgc
     1141 agtaccaaga agtgttatac caggactaaa agaattcctt tatgatgtac accctagcaa
     1201 ggatccaaat gatgtcttga ccattgaatt ctggcaaact gcttttaact gtacctggcc
     1261 caacagcact gtgccataca atgtggacca ccgagtgaat atgactggta aagaagacag
     1321 actgtatgac atgtctgatc agctctgcac tggagaggag aagctgcaag atctgaaaag
     1381 tacctatctg gatacatcac agctaagaat cacaaacaat gtcagacaag ctgtgtatct
     1441 tttggctcat gcgatagatc gttttagcca agctgacata agagaagaat atagggaaag
     1501 tgcagtactt gaaaataaac ctgactttga gtctggaaag ctatggttgt acttgacaaa
     1561 aataaaattc attacccatg atggaaagaa aatagaactt ggcagtaatg gagatgtatt
     1621 aaatggatct tatgatatcc tcaattggca catggataat actggagaaa taacctttgt
     1681 caaagttgga gaatacaaat tcacaagttc aaaatatgaa tttgttcttc caaagaactc
     1741 aacattattt tggaacactg aatcttcaag gcttccagat tcagtctgca caaaagtgtg
     1801 tcctccaggg actcggaagg ggattcacca gggacagccc atatgctgct ttgattgcat
     1861 cccatgtact gatggatatg tgtcagagaa accaggtcaa aggctatgtg atccatgtgg
     1921 ggaaaatgac tggtccaatg cggagaagaa caagtgtgtg ccaaagcatg tggaattcct
     1981 tgcttatgag gaggccctgg ggttcaccct tgtcatcctt tccatctttg gagctcttgt
     2041 ggtcttggca gtcactgttg tgtatgtgat ccacaggcac actccattgg tgaaagccaa
     2101 tgaccgggag ctgagcttcc tcattcaggt gtctctggga atcacagtgc tatcatccat
     2161 gttgttcata ggcaagccat gcaactggtc ctgcaagacc cgtcaggtca ctctggcact
     2221 gggcttttgc ctttgtttgt cttccattct tggaaagact gtttcactct tttttgccta
     2281 caggatttcc atatctaaaa ctcggctaat atccatgcac cccatttttc gtaaactcat
     2341 tgtgctgatc tgtgttgtag gggagattgg tgtatgcaca acttacttag tgttggagcc
     2401 tccaagcctg ttcaagaaca ttgaacctca aaatgtaaag atcatctttg aatgcaatga
     2461 aggttctata gagtttctgt gctccatttt tgggtttgat gttcttttgg ctctgctgtg
     2521 ttttgttacc acctttgtgg ctcgccagct gccagataac tattatgaag gtaaatgtat
     2581 cacttttgga atgctggtct ttttcattgt ctggatctct tttgtccctg cttacttggg
     2641 caccaaaggc aaattcaatg tggctgtgga aatatttgcc attttggcat ccagctatgg
     2701 cttgttaggc tgtgtatttc ttcccaagtg tttcattatc ttgctgaggc caaagaggaa
     2761 cactgatgaa actgttggtg gaagagtccc cactgttgac aggagcatcc agctgacctc
     2821 agcttctgtg agcagtgagc ttaacagcac cacggtgtcc actgtcctgg atgagtagag
     2881 cagtgagatc catgtgacat gcaaagctgg ataatggcat agctcaatct tcctctgaac
     2941 attg
//
