LOCUS       NM_001104644            2637 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus vomeronasal 2, receptor 53 (Vmn2r53), mRNA.
ACCESSION   NM_001104644
VERSION     NM_001104644.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Itakura T, Murata K, Miyamichi K, Ishii KK, Yoshihara Y and Touhara
            K.
  TITLE     A single vomeronasal receptor promotes intermale aggression through
            dedicated hypothalamic neurons
  JOURNAL   Neuron 110 (15), 2455-2469 (2022)
   PUBMED   35654036
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Pan J, Mor G, Ju W, Zhong J, Luo X, Aldo PB, Zhong M, Yu Y, Jenkins
            EC, Brown WT and Zhong N.
  TITLE     Viral Infection-Induced Differential Expression of LncRNAs
            Associated with Collagen in Mouse Placentas and Amniotic Sacs
  JOURNAL   Am J Reprod Immunol 74 (3), 237-257 (2015)
   PUBMED   26073538
REFERENCE   3  (bases 1 to 2637)
  AUTHORS   Young JM and Trask BJ.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC139131.19.
            
            On Jul 1, 2020 this sequence version replaced NM_001104644.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMN01164132 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on manual assertion, expression,
                                         longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-209               AC139131.19        42047-42255
            210-501             AC139131.19        44152-44443
            502-1299            AC139131.19        49257-50054
            1300-1536           AC139131.19        52066-52302
            1537-1660           AC139131.19        65877-66000
            1661-2637           AC139131.19        68257-69233
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 7.56 cM"
     gene            1..2637
                     /gene="Vmn2r53"
                     /gene_synonym="EG637908; Gm471"
                     /note="vomeronasal 2, receptor 53"
                     /db_xref="GeneID:637908"
                     /db_xref="MGI:MGI:3644480"
     CDS             1..2637
                     /gene="Vmn2r53"
                     /gene_synonym="EG637908; Gm471"
                     /note="vomeronasal receptor Vmn2r53"
                     /codon_start=1
                     /product="vomeronasal 2, receptor 53 precursor"
                     /protein_id="NP_001098114.2"
                     /db_xref="CCDS:CCDS52018.1"
                     /db_xref="GeneID:637908"
                     /db_xref="MGI:MGI:3644480"
                     /translation="MWLCTLLSVLFGCLSGSALSGPRVWIIPRQSPRFDRPGDVIVGG
                     SFSIFHFSDGTLSNFTAPPPVLKTSSASMWSYRVAQSFVFAIEEINRSAHLLPNLTLG
                     FSIRNSGDSVHGALYETMGFLTGQEEPIPNYTCQHGSPQAALVGDTRSSLSVSMARLL
                     GLYKFPQVSYSSSLPSLSDKIQFPSFIRTLTSDLTCSHAVTQLVIHFQWSWVIILAHD
                     DDFGQQASSLATQMLTPAGVCIEYHLHVPSHQSFGKIEETVQKMQKCTARVVLVFLSN
                     SNFQLILHGLLAVPVSGQVWVSMDTLHMALALTIPGISQVLQGTFGLLYHSSRAIGFP
                     EFLAHLRPSQTPEDMFIKKFWEFTFDCTWPYQNSTVTEGVQFCTGNESLKNKPHPFPE
                     VSRIDAAYTAVYSIAHALHNMLACEHQERKGTNSHNFHSWQLLHNLRNVYFKTSDGNK
                     IMFDANGDLVTQFDIFQGKKTPAGVFHLVHVGLIDPQASSGNKMMVQLKQDLQVSSLN
                     AEITVPTSICSESCLPGFSQVPRLGAPHCCFDCSPCPEGQFTDQRDMKRCLLCPKEQY
                     SSHTRDHCLPRTEIFLAFEEPLGFILALVALLLAGLAVLVLGVFLKHRDTPVVRANNR
                     TLSYFLLISLSLCALCALLFLGRPTVTTCLLRQTIFAVVFTVAVSSVLAKTLTVVLAF
                     RVTRPRSRIQVCLSSGASTSVVLIASLIQVVLCGIWLITSPPFPDRDMISEPRHTVIQ
                     CHEGSGANFFCVLGFLGFLAGGTFSVAFLARGLPDVFNETKFLTFSMLLFCSVWTAFL
                     PLYHSARGKSTVAVEIFSILASTAGLLGGIFIPKCYIILLKPEKNTPAWLRQGHQVQH
                     NRQCEMLQRRCVSSGESLGSSL"
     exon            1..209
                     /gene="Vmn2r53"
                     /gene_synonym="EG637908; Gm471"
                     /inference="alignment:Splign:2.1.0"
     exon            210..501
                     /gene="Vmn2r53"
                     /gene_synonym="EG637908; Gm471"
                     /inference="alignment:Splign:2.1.0"
     exon            502..1299
                     /gene="Vmn2r53"
                     /gene_synonym="EG637908; Gm471"
                     /inference="alignment:Splign:2.1.0"
     exon            1300..1536
                     /gene="Vmn2r53"
                     /gene_synonym="EG637908; Gm471"
                     /inference="alignment:Splign:2.1.0"
     exon            1537..1660
                     /gene="Vmn2r53"
                     /gene_synonym="EG637908; Gm471"
                     /inference="alignment:Splign:2.1.0"
     exon            1661..2637
                     /gene="Vmn2r53"
                     /gene_synonym="EG637908; Gm471"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtggctgt gtactctcct ttctgttctc tttggatgtc tctctgggtc tgccctttct
       61 ggaccaagag tctggataat tccaaggcag agtcctcgct ttgaccgtcc tggagatgta
      121 attgtgggtg gcagcttctc tatctttcac ttttctgatg gtaccctgtc taatttcact
      181 gccccaccac ctgtgctgaa gacttcaagt gcctccatgt ggagctaccg ggtagcccag
      241 agtttcgtct ttgccattga ggagattaat aggagtgctc acttgttgcc caatttgaca
      301 ctgggcttct ccattcgaaa ctctggagac tcagtgcatg gagcgctcta tgagacaatg
      361 ggctttctca cagggcagga ggagcccatc cccaactaca catgccagca tggctctcct
      421 caggctgcct tggttgggga cacacggtct tccctgtctg tctccatggc cagacttctg
      481 gggctgtaca agtttcccca ggtcagttac tcatcttcac tacccagtct gagtgacaag
      541 atccagtttc catccttcat tcggaccctg actagtgacc taacatgctc ccatgcagtt
      601 acccagctgg taattcactt tcaatggtcc tgggtgatca ttcttgccca tgatgatgac
      661 tttgggcagc aggccagctc tctggccaca cagatgttga ccccagctgg tgtgtgcatt
      721 gagtatcacc ttcacgtccc ttcccatcag tcctttggga agattgaaga gactgtccag
      781 aagatgcaga aatgtacagc cagagttgtt ttggttttct taagcaattc aaatttccag
      841 ctcatcctac atggcttact ggctgtccct gtctcaggac aggtgtgggt cagcatggac
      901 actctgcaca tggcacttgc cctgaccata ccaggcattt cccaggtgtt gcaaggcaca
      961 tttggccttc tgtatcacag cagcagggct attggcttcc ctgagttcct tgctcacctg
     1021 cgccccagcc agaccccaga agacatgttt ataaagaagt tctgggagtt cacctttgat
     1081 tgtacatggc cctaccaaaa cagcacagtg acagagggtg tccagttctg cacaggaaat
     1141 gagagtctga aaaacaagcc acatcccttt ccagaagtga gtagaattga tgctgcttac
     1201 acagctgtct acagcattgc ccatgctctg cacaatatgc tagcctgtga gcaccaggag
     1261 aggaaaggta caaactctca caacttccat tcctggcagc tgcttcataa cctcagaaat
     1321 gtgtacttca agacttctga tggaaataag attatgtttg atgccaatgg agatttggtg
     1381 acacaatttg acattttcca agggaagaag actcctgcag gtgtattcca cttggtgcat
     1441 gtaggcttga tagaccctca agcctcttca ggaaacaaaa tgatggtcca gttgaagcag
     1501 gatctccaag tgagttctct aaatgcagag ataactgtgc ccacctccat ctgcagtgaa
     1561 agctgccttc cagggttcag ccaggtaccc cgactgggag ccccccactg ctgttttgat
     1621 tgcagtccat gccctgaggg acagtttaca gaccaaagag acatgaagag atgccttctg
     1681 tgccccaagg agcagtactc gagccacacc agagaccatt gcctgcccag gacagagatc
     1741 ttcttggcct ttgaggaacc actgggattc atattggctt tggtagcact cttgctggct
     1801 ggtctggctg tcctggttct tggagtgttc ctgaagcacc gggatacacc tgtggtcagg
     1861 gccaacaaca gaactctcag ctacttcctc ctgatctctc tttctttgtg tgccctgtgt
     1921 gccttgctct tccttgggag acccactgtt actacctgcc tcctccgtca gaccatcttt
     1981 gctgtggtat tcacagtggc tgtctcctcc gttctggcta agactctaac agtggtcttg
     2041 gccttccgag tcaccaggcc acgaagcagg atccaggtat gcctgagctc tggtgcttct
     2101 acctcagtgg tcctcattgc ttccttaata caggttgttc tttgtgggat atggttgatt
     2161 acctctccac cattcccaga cagggatatg atctcagagc cccggcacac tgtcatccaa
     2221 tgccatgagg gttctggagc caacttcttc tgtgtgctgg gtttcttggg tttcctggca
     2281 gggggtacct tctctgtggc ttttctagcc aggggccttc cagatgtctt caatgagacc
     2341 aagttcctca ccttcagcat gctgctcttc tgcagtgtct ggacagcctt ccttcccctg
     2401 taccatagtg cccggggaaa gtccactgtg gctgtagaga tcttttccat cctggcctcc
     2461 actgctgggc ttctgggtgg catcttcatc cccaagtgct acatcatctt gctgaaacct
     2521 gagaagaaca cccctgcctg gttaaggcaa ggccaccagg tacagcacaa taggcagtgt
     2581 gagatgctcc agagaaggtg tgtgtcctca ggagagtcac taggatcaag tttatga
//
