LOCUS       NM_198961               2849 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus vomeronasal 2, receptor 43 (Vmn2r43), mRNA.
ACCESSION   NM_198961 XM_355851
VERSION     NM_198961.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2849)
  AUTHORS   Young JM and Trask BJ.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
REFERENCE   2  (bases 1 to 2849)
  AUTHORS   Loconto J, Papes F, Chang E, Stowers L, Jones EP, Takada T,
            Kumanovics A, Fischer Lindahl K and Dulac C.
  TITLE     Functional expression of murine V2R pheromone receptors involves
            selective association with the M10 and M1 families of MHC class Ib
            molecules
  JOURNAL   Cell 112 (5), 607-618 (2003)
   PUBMED   12628182
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC165963.4 and AC188454.2.
            
            On Aug 21, 2018 this sequence version replaced NM_198961.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ543405.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-231               AC165963.4         123903-124133       c
            232-475             AC165963.4         121052-121295       c
            476-1288            AC165963.4         118493-119305       c
            1289-1516           AC165963.4         116915-117142       c
            1517-1640           AC165963.4         111239-111362       c
            1641-2849           AC188454.2         1316-2524
FEATURES             Location/Qualifiers
     source          1..2849
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 5.76 cM"
     gene            1..2849
                     /gene="Vmn2r43"
                     /gene_synonym="EC2-V2R; Gm1961"
                     /note="vomeronasal 2, receptor 43"
                     /db_xref="GeneID:381838"
                     /db_xref="MGI:MGI:3037819"
     exon            1..231
                     /gene="Vmn2r43"
                     /gene_synonym="EC2-V2R; Gm1961"
                     /inference="alignment:Splign:2.1.0"
     CDS             35..2572
                     /gene="Vmn2r43"
                     /gene_synonym="EC2-V2R; Gm1961"
                     /note="EC2-V2R pheromone receptor; vomeronasal receptor
                     Vmn2r43"
                     /codon_start=1
                     /product="vomeronasal 2, receptor 43 precursor"
                     /protein_id="NP_945199.1"
                     /db_xref="CCDS:CCDS57484.1"
                     /db_xref="GeneID:381838"
                     /db_xref="MGI:MGI:3037819"
                     /translation="MLTLMGVFFFLNIPLFMANFIDPRCFWRINLNEIQDEYLGLTCA
                     FILAAVQKPIEKDYFNKTLNFLKTTKNHKYALALVFSMDEINRNPDLLPNMSLIIRYT
                     LGRCDGKTGIPTPYLLHKKKQSPIPNYFCNEESMCSFLLTGPNWEILQLTYGPFHSTF
                     SDDEQYPYLYQMAPKDTSLALAMVSFIHYFNWNWIGLLIPDDDQGNQFLLELKKQSGN
                     KKICFAFVKMISVDDILLEQKTEMYYQQIVMSSSNVIIIYEETINFIDLIFRMWEPPV
                     LRRIWITTKQWNFPTSKRDITHGTFYGSLTFLPHRGGISGFKNFVQTWFHLRSKDLYL
                     VMPEWKYFKYESLASNCKMLKSNSSNASFDWLMEQKFDMAFSESSHNIYNAVYVVAHA
                     LHEMNLQQVDNQAVDNGKGASSHCLKVNSFLRKIHFTNPVGDKVIMKQRVIMQEDYDI
                     FHFENLSQHLGIKVKLGKFSPYFSHGRNFHLYVDMLEVATGSRKMPSSVCSAECSPGF
                     RRLWKEGMAACCFVCRPCPENEISNETNMDQCVNCPEYQYANTEQNKCIKKGVTFLSY
                     EDPLGMVLALMAFCFSAFTAVVLCVFVKHHDTPIVKANNRILSYILLLSLMSCFLCSF
                     FFIGHPNRATCVLQQITFGIVFTVAVSTVLAKTVTVVLAFKVTDPGRRLRHFLVSGTP
                     NYIIPICSLFQCVLCAIWLAVSPPFVDIDEHSQHGHIIIVCNKGSVTAFYCVLGYLAC
                     LALGSFIVAFLAKNLPDTFNEAKFLTFSMLVFFSVWVTFLPVYHSTKGKVMVAVEIFS
                     ILASSAGMLGCIFAPKIYIILMRPERNSTQNIKESNSTQKIKEKSNS"
     exon            232..475
                     /gene="Vmn2r43"
                     /gene_synonym="EC2-V2R; Gm1961"
                     /inference="alignment:Splign:2.1.0"
     exon            476..1288
                     /gene="Vmn2r43"
                     /gene_synonym="EC2-V2R; Gm1961"
                     /inference="alignment:Splign:2.1.0"
     exon            1289..1516
                     /gene="Vmn2r43"
                     /gene_synonym="EC2-V2R; Gm1961"
                     /inference="alignment:Splign:2.1.0"
     exon            1517..1640
                     /gene="Vmn2r43"
                     /gene_synonym="EC2-V2R; Gm1961"
                     /inference="alignment:Splign:2.1.0"
     exon            1641..2849
                     /gene="Vmn2r43"
                     /gene_synonym="EC2-V2R; Gm1961"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aatctacact gcccagattt aacgcaggaa aaatatgtta actttgatgg gagtcttctt
       61 cttccttaac attccacttt tcatggccaa ctttattgat cccaggtgct tttggagaat
      121 aaatttgaat gaaattcagg atgaatattt gggattaact tgtgctttca tcctggcagc
      181 agttcagaaa cctattgaga aagattattt caacaagact ctgaatttcc taaaaacaac
      241 taaaaaccac aaatatgctt tggcattggt cttttcaatg gatgaaatca acaggaatcc
      301 tgatctttta ccaaatatgt ctttgatcat aagatacact ttgggccgtt gtgatggaaa
      361 aactggaata cctacaccat atttattaca taaaaaaaaa caaagcccta tcccaaacta
      421 tttctgtaat gaagagagta tgtgttcgtt tctgcttaca ggacccaatt gggagatcct
      481 tcagcttacc tatggacctt tccattctac cttcagtgat gatgaacaat atccctatct
      541 ctatcagatg gccccaaagg acacatctct agcattggca atggtctcct tcatacatta
      601 cttcaactgg aattggattg gccttctcat cccagatgat gatcaaggaa accaatttct
      661 tttagagttg aaaaaacaga gtggaaacaa gaaaatttgc tttgcctttg tgaaaatgat
      721 ctctgttgat gacattttat tagaacaaaa aactgaaatg tactaccaac aaattgtgat
      781 gtcatcctca aatgttatca tcatttatga ggaaacaatc aatttcattg atttgatctt
      841 cagaatgtgg gaacctccag ttttacggag aatatggatc accacaaagc aatggaattt
      901 ccctaccagt aagagagaca taactcatgg cacattctat ggatcactta ctttcctacc
      961 ccaccgtggt gggatttctg gctttaaaaa ttttgtacag acttggttcc atctcagaag
     1021 caaagattta tatctagtaa tgccagagtg gaaatacttt aaatatgaat ccttagcatc
     1081 taactgtaaa atgctgaaga gcaattcatc caatgcctca tttgattggc taatggaaca
     1141 gaaatttgac atggccttta gtgagagtag tcataacata tacaatgctg tgtatgtcgt
     1201 agcccatgca ctccatgaga tgaatttgca gcaggttgat aatcaggcag tagacaatgg
     1261 gaaaggagcc agttctcact gcttgaaggt aaactccttt cttagaaaga tccacttcac
     1321 taatcctgtt ggggacaaag tgattatgaa acaaagagta ataatgcagg aagactatga
     1381 catttttcat tttgagaatc tctcacaaca ccttgggatt aaggtgaagt taggaaagtt
     1441 cagcccatat ttttcacatg gtcgaaactt tcacttatat gtagacatgc ttgaggtggc
     1501 cacaggaagt agaaagatgc catcctctgt gtgcagtgcg gaatgtagtc ctggattcag
     1561 aagattgtgg aaggagggaa tggcagcctg ctgttttgtt tgcaggccct gccctgaaaa
     1621 tgaaatttct aatgagacaa atatggatca atgtgtgaat tgtccagaat accaatatgc
     1681 caacacagaa cagaacaaat gtattaaaaa aggtgtcacc tttctaagct atgaagaccc
     1741 cttggggatg gtacttgcct taatggcctt ctgtttctct gcattcacag ctgtggtact
     1801 ttgtgtcttt gtgaagcacc atgacacacc tattgtgaag gccaataaca gaatcctcag
     1861 ctacatatta ttgctatcac tcatgtcctg ttttctgtgt tcctttttct tcattggcca
     1921 tcctaacaga gccacctgtg tcttacaaca aatcacattt ggaattgtat tcactgtggc
     1981 tgtttccaca gttctggcga aaacagtcac tgtggttctc gccttcaaag tcacagaccc
     2041 agggagaaga ttgagacact tccttgtatc agggacaccc aactacatta ttcccatatg
     2101 ttccctattt caatgtgttc tgtgtgcaat ctggctagca gtttctcctc cctttgttga
     2161 tattgatgaa cactctcagc atggccacat catcattgtg tgcaacaagg gctcagttac
     2221 tgcattctac tgtgttcttg gatacttggc ctgcctggca cttggaagct tcattgtggc
     2281 tttcttggcc aagaatctgc ctgacacatt caatgaagcc aagttcttga ccttcagcat
     2341 gctagtgttc ttcagtgtct gggtcacctt cctccctgtc taccatagca ccaagggcaa
     2401 ggtcatggtt gctgtggaga tcttctccat cttggcatcc agtgcaggga tgcttggatg
     2461 tatttttgca cccaagattt atatcatttt aatgagacca gaaagaaatt ctacccaaaa
     2521 catcaaagag agtaattcta cccaaaagat caaagaaaaa tcaaattcct gaatgaataa
     2581 ttcaggaatt atgtaaaatg taaatttggt acatatccac caaatattgg gttatagtga
     2641 atgtgtccag ttttagaatc actctcactg gttgctctag tgatgtcatg aagtatcata
     2701 tctactgaac ttctatatag agtccacaaa tcttgaactc attcacttgc ttcatttcct
     2761 ctcacagaat taaactctct aattattaca atcttattaa tcattttgct ctcatggaga
     2821 tttccccatg gtaacttcca aaaaaaaaa
//
