LOCUS       NM_009493               3623 bp    mRNA    linear   ROD 20-FEB-2022
DEFINITION  Mus musculus vomeronasal 2, receptor 42 (Vmn2r42), mRNA.
ACCESSION   NM_009493 XM_001006281
VERSION     NM_009493.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3623)
  AUTHORS   Young JM and Trask BJ.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
REFERENCE   2  (bases 1 to 3623)
  AUTHORS   Matsunami H and Buck LB.
  TITLE     A multigene family encoding a diverse array of putative pheromone
            receptors in mammals
  JOURNAL   Cell 90 (4), 775-784 (1997)
   PUBMED   9288756
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AF011414.1.
            
            On Dec 8, 2009 this sequence version replaced NM_009493.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF011414.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2912              AF011414.1         1-2912
            2913-2948           AF011414.1         2914-2949
            2949-3623           AF011414.1         2951-3625
FEATURES             Location/Qualifiers
     source          1..3623
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 5.8 cM"
     gene            1..3623
                     /gene="Vmn2r42"
                     /gene_synonym="V2r4"
                     /note="vomeronasal 2, receptor 42"
                     /db_xref="GeneID:22310"
                     /db_xref="MGI:MGI:1316666"
     exon            1..313
                     /gene="Vmn2r42"
                     /gene_synonym="V2r4"
                     /inference="alignment:Splign:2.1.0"
     CDS             117..2675
                     /gene="Vmn2r42"
                     /gene_synonym="V2r4"
                     /note="vomeronasal 2, receptor, 4; vomeronasal organ
                     family 2, receptor, 4; vomeronasal receptor Vmn2r42"
                     /codon_start=1
                     /product="vomeronasal 2, receptor 42 precursor"
                     /protein_id="NP_033519.1"
                     /db_xref="CCDS:CCDS57483.1"
                     /db_xref="GeneID:22310"
                     /db_xref="MGI:MGI:1316666"
                     /translation="MFIFMGVFFLLNITLLMANFIDPRCFWRINLDEITDEYLGLSCA
                     FILAAVQTPIEKDYFNTTLNFLKTTKNHKYALALVFAMDEINRYPDLLPNMSLIIRYS
                     LGHCDGKTVTPTPYLFHRKKQSPIPNYFCNEESMCSFLLSGPNWDESLSFWKYLDSFL
                     SPRILQLSYGSFSSIFSDDEQYPYLYQMAPKDTSLALAMVSFILYLKWNWIGLVIPDD
                     DQGNQFLLELKKQSENKEICFAFVKMISVDEVSFPQKTEINYKQIVKSLTNVIIIYGE
                     TYNFIDLIFRMWEPPILQRIWITTKQLNFPTSKTDISHDTFYGSLTFLPHHGEISGFK
                     NFVQTWFHLRNTDLCLVMPEWKYINSEDSASNCKILKNSSSDASFDWLMEEKLDMAFS
                     ENSHNIYNAVHAIAHALHEMNLQQADNQAIDNGKGASSHCLKVNSFLRRTYFTNPLGD
                     KVFMKQRVIMQDEYDIVHFANLSQHLGIKMKLGKFSPYLPHGRHSHLYVDMIELATGR
                     RKMPSSVCSADCSPGFRRLWKEGMAACCFVCSPCPENEISNETNMDQCVNCPEYQYAN
                     TEQNKCIQKGVTFLSYEDPLGMALALMAFCFSAFTAVVLCVFVKHHDTPIVKANNRSL
                     SYLLLMSLMFCFLCSFFFIGLPNKVICVLQQITFGIVFTVAVSTVLAKTVTVVLAFKV
                     TVPGRRLRYFLVSGTLNYIIPICSLLQCVLCAIWLAVSPPFVDIDEHSQHGHIIIVCN
                     KGSVTAFYCVLGYLACLALGSFTLAFLAKNLPDAFNEAKFLTFSMLVFCSVWVTFLPV
                     YHSTKGKHMVAVEIFSILASSAGMLGCIFVPKIYIILMRPERNSTQKIREKSYF"
     exon            314..605
                     /gene="Vmn2r42"
                     /gene_synonym="V2r4"
                     /inference="alignment:Splign:2.1.0"
     exon            606..1418
                     /gene="Vmn2r42"
                     /gene_synonym="V2r4"
                     /inference="alignment:Splign:2.1.0"
     exon            1419..1646
                     /gene="Vmn2r42"
                     /gene_synonym="V2r4"
                     /inference="alignment:Splign:2.1.0"
     exon            1647..1770
                     /gene="Vmn2r42"
                     /gene_synonym="V2r4"
                     /inference="alignment:Splign:2.1.0"
     exon            1771..3623
                     /gene="Vmn2r42"
                     /gene_synonym="V2r4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgaatatgca ataaacctca catttgcaca aagaaataaa agctggtaga aatctgatgt
       61 gctgatatgc atggcacttc acaatccgca ctgcccaggt ttaaggcagg aaaaagatgt
      121 tcattttcat gggagtcttc ttcctactta atattacact tctcatggcc aatttcattg
      181 atcccaggtg cttttggaga ataaatttgg atgaaataac ggatgaatat ttgggattat
      241 cttgtgcttt catcctggca gctgttcaga cacccattga aaaagattat ttcaacacga
      301 ctcttaattt tctaaaaact actaaaaacc acaaatatgc tttggcattg gtgtttgcaa
      361 tggatgaaat caacagatat cctgatcttt taccaaatat gtctttgatt atcagatact
      421 ctttgggcca ttgtgatgga aaaactgtaa cacctacacc atatttattt catagaaaaa
      481 agcaaagccc tattcctaat tatttctgta atgaagagag tatgtgttca tttctgcttt
      541 caggacccaa ttgggatgaa tctttaagtt tctggaagta cctggacagc ttcttatctc
      601 cacgtatcct tcagctttcc tatggatctt tcagttccat cttcagtgat gatgaacaat
      661 atccctatct ctatcagatg gccccaaaag acacatctct agcattggca atggtctcct
      721 tcatacttta tttgaaatgg aattggattg gccttgtcat cccagatgat gatcaaggaa
      781 accaatttct tttagagttg aagaaacaga gtgaaaacaa agaaatttgc tttgcctttg
      841 tgaaaatgat ctctgttgat gaagtttcat ttccacaaaa aactgaaata aactacaaac
      901 aaattgtgaa gtcactaaca aatgttatta tcatttatgg agaaacatat aatttcattg
      961 atttgatctt cagaatgtgg gaacctccca ttttacagag aatatggatc accacaaaac
     1021 aattgaattt ccctaccagt aagacagaca taagtcatga cacattctat ggatcactta
     1081 cttttctacc ccaccatggt gagatttctg gctttaaaaa ttttgtacag acatggttcc
     1141 atctcagaaa cacagattta tgtctagtaa tgccagagtg gaaatatatt aactctgaag
     1201 actcagcatc taattgtaaa atacttaaga acagttcatc tgatgcctca tttgattggc
     1261 taatggaaga gaagcttgac atggccttta gtgagaatag tcataacata tataatgctg
     1321 tgcatgccat agcccatgcc ctccatgaga tgaatctgca acaggctgat aatcaggcaa
     1381 tagataatgg aaaaggagcc agttctcact gcttgaaggt aaactccttt ctaagaagga
     1441 cctacttcac taatcctctt ggggacaaag tgtttatgaa gcaaagagta ataatgcagg
     1501 atgaatatga cattgttcac tttgcgaatc tctcacaaca ccttgggatt aagatgaagt
     1561 taggaaagtt cagcccatat ttaccacatg gtcgacactc tcacttatac gtagacatga
     1621 ttgagttggc cacaggaaga agaaagatgc catcctctgt gtgcagtgca gattgtagtc
     1681 ctggattcag aagattatgg aaggagggaa tggcagcctg ctgttttgtt tgcagcccct
     1741 gccctgaaaa tgaaatttct aatgagacaa atatggatca atgcgtgaat tgtccagaat
     1801 accaatatgc caacacagaa cagaacaaat gtattcagaa aggtgtcacc ttcctaagct
     1861 atgaagaccc cttggggatg gcacttgcct taatggcctt ctgcttctct gcattcacag
     1921 ctgtggtact ttgtgtcttt gtgaagcacc atgacactcc tattgtgaag gccaataaca
     1981 gaagcctcag ctatctatta ctcatgtcac tcatgttctg ttttctgtgc tcctttttct
     2041 tcattggcct tccaaacaaa gtcatctgtg tcttacagca aatcacattt ggaattgtat
     2101 tcactgtggc tgtttccaca gttctggcca aaacagtcac tgtggttcta gctttcaaag
     2161 tcacagtccc aggaagaaga ttgagatact tccttgtatc agggacacta aactacatta
     2221 ttcctatatg ttccctactc caatgtgttc tgtgtgcaat ctggctagca gtctctcctc
     2281 cctttgttga tattgatgaa cactctcagc atggccacat catcattgtg tgcaacaagg
     2341 gctcagttac tgcattctac tgtgtccttg gatacttggc ctgcctggca ctgggaagct
     2401 tcactttggc tttcttggcc aagaatctgc ctgatgcatt caatgaagcc aagttcttga
     2461 ccttcagcat gctagtgttc tgcagtgtct gggtcacctt cctccctgtg taccatagca
     2521 caaagggcaa acacatggtt gctgtggaga tcttctctat cttggcatcc agtgcaggga
     2581 tgcttggatg tatttttgta cccaagattt atatcatttt aatgagacca gagagaaatt
     2641 ctacccaaaa gatcagagaa aaatcatatt tttgaacaaa tatttaggaa ttctgtcaaa
     2701 tgtaaagttg gtacataacc accaaatatt gggttatagt gcatgtgtct agttttagaa
     2761 tcactctcac tggttgctct agtgataaaa ggaagtatca tatctactga acttccgtac
     2821 agtgtccata aaatcttgca ctcattcact ttcttcattt tctctcagag aactaaactc
     2881 tctaattatt acaattttat tcttcgtttt gatttcatgg agattgccct ctggtaactt
     2941 ccaaaaaacg ttgataaggc agtttaatcc accactttgt gtagaaaaaa tgagatctag
     3001 gacagacagg gttacacata gaaaccatct accaaatcaa ataatcaatg agaaacacag
     3061 actaactaaa taatcagcaa agttgaaatc agaacttatt ttctgatttc cagtaagagc
     3121 acacacagaa gaaaatactg actttttttt tcttctgttc ttcaagctac tggccaataa
     3181 tctaaggagg aaatgttcct tttctgctgt caaatacaaa tatattatat ccaacaatga
     3241 tcagaagccc agggattctg tggctgaatt gggaatattt ggaagaagct gaggaggagg
     3301 gtgaccagca ttctcaacaa acctggacaa gcaagatctc tcagacactg agcctctaac
     3361 cagagatcat acacaagctg atgtgaagcc cccaacaaat atgcaccata agactgcctg
     3421 gtctagcatc agtgggagac acacctaacc ccagagagac ttaagtcccc agggattggg
     3481 aagtgctggg cattggggat gtagggatat catcttggag atggcagagg agttgttaga
     3541 tgaggaagag tcagtggggc aaaccaggag ggggataact actagattgt aacaaaaata
     3601 ttgagtaata ataaattaaa aaa
//
