LOCUS       NM_001385077            2538 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus vomeronasal 2, receptor 39 (Vmn2r39), transcript
            variant 2, mRNA.
ACCESSION   NM_001385077 XM_030242800
VERSION     NM_001385077.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2538)
  AUTHORS   Young JM and Trask BJ.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC133647.3.
            
            On Jul 8, 2020 this sequence version replaced XM_030242800.1.
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on manual assertion, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-197               AC133647.3         116526-116722       c
            198-441             AC133647.3         113667-113910       c
            442-1254            AC133647.3         111109-111921       c
            1255-1482           AC133647.3         109511-109738       c
            1483-1606           AC133647.3         103869-103992       c
            1607-2538           AC133647.3         100790-101721       c
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 5.34 cM"
     gene            1..2538
                     /gene="Vmn2r39"
                     /gene_synonym="EG545909"
                     /note="vomeronasal 2, receptor 39"
                     /db_xref="GeneID:545909"
                     /db_xref="MGI:MGI:3704108"
     CDS             1..2538
                     /gene="Vmn2r39"
                     /gene_synonym="EG545909"
                     /note="isoform 2 precursor is encoded by transcript
                     variant 2; vomeronasal receptor Vmn2r39"
                     /codon_start=1
                     /product="vomeronasal receptor Vmn2r39 isoform 2
                     precursor"
                     /protein_id="NP_001372006.1"
                     /db_xref="GeneID:545909"
                     /db_xref="MGI:MGI:3704108"
                     /translation="MLTLMGVFFFLNIPLFMANFIDPRCFWRINLNEIQDEYLGLTCA
                     FILAAVQKPIEKDYFNKTLNFLKTTKNHKYALALVFSMDEINRNPDLLPNMSLIIRYT
                     LGRCDGKTGIPTPYLLHKKKQSPIPNYFCNEESMCSFLLTGPNWEILQLTYGPFHSTF
                     SDDEQYPYLYQMAPKDTSLALAMVSFIHYFNWNWIGLLIPDDDQGNQFLLELKKQSGN
                     KEICFAFVKMISVDDILLEQKTEMYYQQIVMSSSNVIIIYEETINFIDLIFRMWEPPV
                     LRRIWITTKQWNFPTSKRDITHGTFYGSLTFLPHHGGISGFKNFVQTWFHLRSKDLYL
                     VMPEWKYFKYESLASNCKMLKSNSSNASFDWLMEQKFDMAFSESSHNIYNAVYAIAHA
                     LHEMNLQQVDNQAVDNGKGASSHCLKVNSFLRKIHFTNPVGDKLIMKERVIIQEDYDI
                     FHFENLSQHLGIKVKLGKFSPYFSHGRNFHLYVDMLEVATGSRKMPSSVCSAECSPGF
                     RRLWKEGMAACCFVCRPCPENEISNETNMDQCVNCPEYQYANTEQNKCIKKGVTFLSY
                     EDPLGMVLALMAFCFSAFTAVVLCVFVKHHDTPIVKANNRILSYILLLSLMSCFLCSF
                     FFIGHPNRATCVLQQITFGIVFTVAVSTVLAKTVTVVLAFKVTDPGRRLRHFLVSGTP
                     NYIIPICSLFQCVLCAIWLAVSPPFVDIDEHSQHGHIIIVCNKGSVTAFYCVLGYLAC
                     LALGSFIVAFLAKNLPDTFNEAKFLTFSMLVFFSVCVTFLPVYHSTKGKVMVAVEIFS
                     ILASSAGMLGCIFAPKIYIILMRPERNSTQNIKESNSTQKIKEKSNS"
     exon            1..197
                     /gene="Vmn2r39"
                     /gene_synonym="EG545909"
                     /inference="alignment:Splign:2.1.0"
     exon            198..441
                     /gene="Vmn2r39"
                     /gene_synonym="EG545909"
                     /inference="alignment:Splign:2.1.0"
     exon            442..1254
                     /gene="Vmn2r39"
                     /gene_synonym="EG545909"
                     /inference="alignment:Splign:2.1.0"
     exon            1255..1482
                     /gene="Vmn2r39"
                     /gene_synonym="EG545909"
                     /inference="alignment:Splign:2.1.0"
     exon            1483..1606
                     /gene="Vmn2r39"
                     /gene_synonym="EG545909"
                     /inference="alignment:Splign:2.1.0"
     exon            1607..2538
                     /gene="Vmn2r39"
                     /gene_synonym="EG545909"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgttaactt tgatgggagt cttcttcttc cttaacattc cacttttcat ggccaacttt
       61 attgatccca ggtgcttttg gagaataaat ttgaatgaaa ttcaggatga atatttggga
      121 ttaacttgtg ctttcatcct ggcagcagtt cagaaaccta ttgagaaaga ttatttcaac
      181 aagactctga atttcctaaa aacaactaaa aaccacaaat atgctttggc attggtcttt
      241 tcaatggatg aaatcaacag gaatcctgat cttttaccaa atatgtcttt gatcataaga
      301 tacactttgg gccgttgtga tggaaaaact ggaataccta caccatattt attacataaa
      361 aaaaaacaaa gccctatccc aaactatttc tgtaatgaag agagtatgtg ttcgtttctg
      421 cttacaggac ccaattggga gatccttcag cttacctatg gacctttcca ttctaccttc
      481 agtgatgatg aacaatatcc ctatctctat cagatggccc caaaggacac atctctagca
      541 ttggcaatgg tctccttcat acattacttc aactggaatt ggattggcct tctcatccca
      601 gatgatgatc aaggaaacca atttctttta gagttgaaaa aacagagtgg aaacaaggaa
      661 atttgctttg cctttgtgaa aatgatctct gttgatgaca ttttattaga acaaaaaact
      721 gaaatgtact accaacaaat tgtgatgtca tcctcaaatg ttatcatcat ttatgaggaa
      781 acaatcaatt tcattgattt gatcttcaga atgtgggaac ctccagtttt acggagaata
      841 tggatcacca caaagcaatg gaatttccct accagtaaga gagacataac tcatggcaca
      901 ttctatggat cacttacttt cctaccccac catggtggga tttctggctt taaaaatttt
      961 gtacagactt ggttccatct cagaagcaaa gatttatatc tagtaatgcc agagtggaaa
     1021 tactttaaat atgaatcctt agcatctaac tgtaaaatgc tgaagagcaa ttcatccaat
     1081 gcctcatttg attggctaat ggaacagaaa tttgacatgg cctttagtga gagtagtcat
     1141 aacatataca atgctgtgta tgccatagcc catgcactcc atgagatgaa tttgcagcag
     1201 gttgataatc aggcagtaga caatgggaaa ggagccagtt ctcactgctt gaaggtaaac
     1261 tcctttctta gaaagatcca cttcactaat cctgttgggg acaaattgat tatgaaagaa
     1321 agagtaataa tacaggaaga ctatgacatt tttcattttg agaatctctc acaacacctt
     1381 gggattaagg tgaagttagg aaagttcagc ccatattttt cacatggtcg aaactttcac
     1441 ttatatgtag acatgcttga ggtggccaca ggaagtagaa agatgccatc ctctgtgtgc
     1501 agtgcggaat gtagtcctgg attcagaaga ttgtggaagg agggaatggc agcctgctgt
     1561 tttgtttgca ggccctgccc tgaaaatgaa atttctaatg agacaaatat ggatcaatgt
     1621 gtgaattgtc cagaatacca atatgccaac acagaacaga acaaatgtat taaaaaaggt
     1681 gtcacctttc taagctatga agaccccttg gggatggtac ttgccttaat ggccttctgt
     1741 ttctctgcat tcacagctgt ggtactttgt gtctttgtga agcaccatga cacacctatt
     1801 gtgaaggcca ataacagaat cctcagctac atattattgc tatcactcat gtcctgtttt
     1861 ctgtgttcct ttttcttcat tggccatcct aacagagcca cctgtgtctt acaacaaatc
     1921 acatttggaa ttgtattcac tgtggctgtt tccacagttc tggcgaaaac agtcactgtg
     1981 gttctcgcct tcaaagtcac agacccaggg agaagattga gacacttcct tgtatcaggg
     2041 acacccaact acattattcc catatgttcc ctatttcaat gtgttctgtg tgcaatctgg
     2101 ctagcagttt ctcctccctt tgttgatatt gatgaacact ctcagcatgg ccacatcatc
     2161 attgtgtgca acaagggctc agttactgca ttctactgtg ttcttggata cttggcctgc
     2221 ctggcacttg gaagcttcat tgtggctttc ttggccaaga atctgcctga cacattcaat
     2281 gaagccaagt tcttgacctt cagcatgctt gtgttcttca gtgtctgtgt caccttcctc
     2341 cctgtctacc atagcaccaa gggcaaggtc atggttgctg tggagatctt ctccatcttg
     2401 gcatccagtg cagggatgct tggatgtatt tttgcaccca agatttatat cattttaatg
     2461 agaccagaaa gaaattctac ccaaaacatc aaagagagta attctaccca aaagatcaaa
     2521 gaaaaatcaa attcctga
//
