LOCUS       NM_001167537             951 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus vomeronasal 1 receptor, 88 (Vmn1r88), mRNA.
ACCESSION   NM_001167537
VERSION     NM_001167537.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Young JM, Massa HF, Hsu L and Trask BJ.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
REFERENCE   2  (bases 1 to 951)
  AUTHORS   Amid C, Rehaume LM, Brown KL, Gilbert JG, Dougan G, Hancock RE and
            Harrow JL.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record is based on preliminary annotation
            provided by NCBI staff in collaboration with Janet Young. The
            reference sequence was derived from AC171404.5.
            
            Sequence Note: A set of diverse V1R queries was aligned via BLAST
            to the NCBI37 assembly to find candidate V1R-containing genomic
            regions. Open reading frames (ORFs) for V1R genes and pseudogenes
            were then identified.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-951               AC171404.5         34597-35547         c
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 7.79 cM"
     gene            1..951
                     /gene="Vmn1r88"
                     /note="vomeronasal 1 receptor, 88"
                     /db_xref="GeneID:100312474"
                     /db_xref="MGI:MGI:3852416"
     CDS             1..951
                     /gene="Vmn1r88"
                     /note="vomeronasal 1 receptor Vmn1r88"
                     /codon_start=1
                     /product="vomeronasal 1 receptor, 88"
                     /protein_id="NP_001161009.1"
                     /db_xref="CCDS:CCDS52026.1"
                     /db_xref="GeneID:100312474"
                     /db_xref="MGI:MGI:3852416"
                     /translation="MPPSDTIFQIFLIFQFCLGVIGNSSLLMLYVYTFFFKPHLKKLI
                     DSVFMHLTIVNMSTIMFTLLKDIMFSFRVPNFLDDVGCKAVFFSLRVSRGLSICTTSV
                     LSTSQVITITPNNPTFVSWLKPRLSTWIFSSLLCSWIINLLIYGFMIDLVVAKTNMTL
                     VGRGFSHGYCQRKKFGKQNSEWLFSFLIIHDFFYMSVMMWASLYMVIFLYRHRKLAQH
                     LHSPNLSSQSSPERKATHSILFLVSCFVLTYWLNNFITFYGFNTKERNPRLEAINTIL
                     ITSYPTICPFLLMKNNKVILQFTSSFSVLRMTCFQSSLPG"
     exon            1..951
                     /gene="Vmn1r88"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgcctccaa gtgacaccat cttccagatc tttctcatat tccagttttg tcttggtgtc
       61 atagggaact catcattgtt aatgttgtat gtatacactt tcttcttcaa gcctcattta
      121 aagaagttga tagattcagt ttttatgcac ctgacaatag ttaatatgtc aacaatcatg
      181 ttcacattgt taaaagatat catgttttcc tttagagtac ccaattttct ggacgatgtt
      241 ggttgtaagg cagttttctt ttcactcaga gtcagtcggg gtctgtccat ctgcaccacc
      301 tctgttctaa gcacatccca agtcatcacc atcactccca ataatcctac gtttgtctcc
      361 tggcttaagc caagactctc tacatggatt ttttcttcct tactttgctc ctggattatt
      421 aatctactta tctacgggtt tatgattgac ttggtagtag ccaaaaccaa tatgactctc
      481 gttggccgtg gattttcaca tggttactgt caaagaaaga aatttgggaa acaaaattca
      541 gaatggcttt tcagctttct catcattcat gatttcttct atatgtctgt catgatgtgg
      601 gccagcctct acatggttat tttcctatac agacaccgca agttagccca gcatctccac
      661 agcccaaacc tttcctccca gtcatctcct gagcgcaaag ccactcacag catcctgttt
      721 ctggtgagct gctttgtgtt aacttattgg ttgaacaact tcatcacctt ttatggtttt
      781 aatacaaaag aaagaaatcc aagattggag gcaattaata cgattttaat aacaagctac
      841 ccaaccatct gcccttttct actcatgaag aataataagg ttattttgca attcacctct
      901 tcattttctg ttctgagaat gacctgtttt caaagttcac tccctggctg a
//
