LOCUS       NM_053226               1122 bp    mRNA    linear   ROD 06-OCT-2024
DEFINITION  Mus musculus vomeronasal 1 receptor 53 (Vmn1r53), mRNA.
ACCESSION   NM_053226
VERSION     NM_053226.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1122)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
REFERENCE   2  (bases 1 to 1122)
  AUTHORS   Amid,C., Rehaume,L.M., Brown,K.L., Gilbert,J.G., Dougan,G.,
            Hancock,R.E. and Harrow,J.L.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1122)
  AUTHORS   Del Punta,K., Leinders-Zufall,T., Rodriguez,I., Jukam,D.,
            Wysocki,C.J., Ogawa,S., Zufall,F. and Mombaerts,P.
  TITLE     Deficient pheromone responses in mice lacking a cluster of
            vomeronasal receptor genes
  JOURNAL   Nature 419 (6902), 70-74 (2002)
   PUBMED   12214233
REFERENCE   4  (bases 1 to 1122)
  AUTHORS   Lane,R.P., Cutforth,T., Axel,R., Hood,L. and Trask,B.J.
  TITLE     Sequence analysis of mouse vomeronasal receptor gene clusters
            reveals common promoter motifs and a history of recent expansion
  JOURNAL   Proc Natl Acad Sci U S A 99 (1), 291-296 (2002)
   PUBMED   11752409
REFERENCE   5  (bases 1 to 1122)
  AUTHORS   Del Punta,K., Rothman,A., Rodriguez,I. and Mombaerts,P.
  TITLE     Sequence diversity and genomic organization of vomeronasal receptor
            genes in the mouse
  JOURNAL   Genome Res 10 (12), 1958-1967 (2000)
   PUBMED   11116090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC132002.1.
            
            On Dec 31, 2009 this sequence version replaced NM_053226.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC125605.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 40.07 cM"
     gene            1..1122
                     /gene="Vmn1r53"
                     /gene_synonym="V1rb3; VN5"
                     /note="vomeronasal 1 receptor 53"
                     /db_xref="GeneID:113853"
                     /db_xref="MGI:MGI:2148516"
     exon            1..1122
                     /gene="Vmn1r53"
                     /gene_synonym="V1rb3; VN5"
                     /inference="alignment:Splign:2.1.0"
     CDS             99..1031
                     /gene="Vmn1r53"
                     /gene_synonym="V1rb3; VN5"
                     /note="pheromone receptor VN5; vomeronasal receptor 5;
                     vomeronasal 1 receptor, B3; vomernasal 1 receptor Vmn1r53;
                     vomeronasal type 1 receptor B3"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 53"
                     /protein_id="NP_444456.2"
                     /db_xref="CCDS:CCDS20355.1"
                     /db_xref="GeneID:113853"
                     /db_xref="MGI:MGI:2148516"
                     /translation="MNKANLLHTDINLKITLFSEVSVGISANSILIFAHLCMLLGENR
                     PKPIDLYIAFFSLTQLMLLITMGLIAVDMFMPWGRWDSTTCQSLIYLHRLLRGLTLSA
                     TCLLNVLWTITLSPRSSYLTKFKHKSLQHISCAFLFLCVLYMSFNSHLFISIIAYPNL
                     TLENFMYVTQSCSLIPLSYFRKSMFSIPMAIREALLIGLMALSGGYMVAHLWRHKKQA
                     QHLHRTSLSSKASPEQRATRTIMLLMSFFVVLYILDLVIFHSRMKFKDGSILYGVQII
                     VSHSYATVSPFVFICTEKRITNFLRSMCGRIVNI"
ORIGIN      
        1 tggtgatggt tggaatttgt gaacaaggcc ataatatgta atgaagagtt ttctcttttc
       61 tcctcagttt gttgctattt gcttcctaca catgtacaat gaataaagcc aacttactcc
      121 acactgacat aaacctgaaa atcaccttat tctctgaagt gagtgttggg atctcagcta
      181 acagtatcct tatttttgcc catctctgca tgctccttgg tgagaacagg cctaagccca
      241 ttgatctcta cattgctttc ttctccctaa cccaactaat gctgcttata actatgggac
      301 tcatagctgt ggacatgttt atgccttggg ggagatggga ttctaccaca tgccaatccc
      361 ttatctattt gcacaggctt ctgagaggcc tcaccctttc tgctacctgt ctgctgaatg
      421 tcctttggac catcacactt agtcctagaa gctcctattt aacaaagttt aaacataaat
      481 ctctccaaca catctcctgt gcctttcttt tcctctgtgt tctctatatg tcttttaaca
      541 gtcacctctt catatcaatt attgcttacc ccaatttgac cttagagaat ttcatgtatg
      601 ttactcagtc ctgctcactt atacctctga gttacttcag aaaaagcatg ttttccatac
      661 ccatggccat cagggaagcc ttacttattg gtctcatggc cctgtccgga gggtacatgg
      721 tagctcacct atggaggcac aagaagcaag cccagcacct tcacaggacc agcctttctt
      781 caaaagcatc cccagagcaa agggccacca ggaccatcat gctgctcatg agcttctttg
      841 tggttctcta cattttagac ttagttatct tccactcaag aatgaagttc aaggatggct
      901 caatattgta tggtgttcaa attattgtgt cccatagcta tgccacagtc agcccttttg
      961 tgtttatttg cactgaaaag cgtataacta attttttgag gtcaatgtgt ggcagaatag
     1021 taaatatttg attattcatt gatggttatg gaccaagagt ataatccatt atgctgtcat
     1081 cagatctatg gttcattata tggtgcaaac attctgcggc tt
//
