LOCUS       NM_011911                933 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus vomeronasal 1, receptor 49 (Vmn1r49), mRNA.
ACCESSION   NM_011911
VERSION     NM_011911.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 933)
  AUTHORS   Dietschi,Q., Assens,A., Challet,L., Carleton,A. and Rodriguez,I.
  TITLE     Convergence of FPR-rs3-expressing neurons in the mouse accessory
            olfactory bulb
  JOURNAL   Mol Cell Neurosci 56, 140-147 (2013)
   PUBMED   23664818
REFERENCE   2  (bases 1 to 933)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
REFERENCE   3  (bases 1 to 933)
  AUTHORS   Amid,C., Rehaume,L.M., Brown,K.L., Gilbert,J.G., Dougan,G.,
            Hancock,R.E. and Harrow,J.L.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 933)
  AUTHORS   Capello,L., Roppolo,D., Jungo,V.P., Feinstein,P. and Rodriguez,I.
  TITLE     A common gene exclusion mechanism used by two chemosensory systems
  JOURNAL   Eur J Neurosci 29 (4), 671-678 (2009)
   PUBMED   19200072
  REMARK    GeneRIF: We show, in vivo, that the genetic replacement of the
            V1rb2 pheromone receptor coding sequence by an unrelated one from
            the odorant receptor gene M71 maintains gene exclusion, suggesting
            that a common mechanism is used to regulate their transcription.
REFERENCE   5  (bases 1 to 933)
  AUTHORS   Walz,A., Feinstein,P., Khan,M. and Mombaerts,P.
  TITLE     Axonal wiring of guanylate cyclase-D-expressing olfactory neurons
            is dependent on neuropilin 2 and semaphorin 3F
  JOURNAL   Development 134 (22), 4063-4072 (2007)
   PUBMED   17942483
REFERENCE   6  (bases 1 to 933)
  AUTHORS   Col,J.A., Matsuo,T., Storm,D.R. and Rodriguez,I.
  TITLE     Adenylyl cyclase-dependent axonal targeting in the olfactory system
  JOURNAL   Development 134 (13), 2481-2489 (2007)
   PUBMED   17537788
REFERENCE   7  (bases 1 to 933)
  AUTHORS   Walz,A., Mombaerts,P., Greer,C.A. and Treloar,H.B.
  TITLE     Disrupted compartmental organization of axons and dendrites within
            olfactory glomeruli of mice deficient in the olfactory cell
            adhesion molecule, OCAM
  JOURNAL   Mol Cell Neurosci 32 (1-2), 1-14 (2006)
   PUBMED   16531066
REFERENCE   8  (bases 1 to 933)
  AUTHORS   Del Punta,K., Leinders-Zufall,T., Rodriguez,I., Jukam,D.,
            Wysocki,C.J., Ogawa,S., Zufall,F. and Mombaerts,P.
  TITLE     Deficient pheromone responses in mice lacking a cluster of
            vomeronasal receptor genes
  JOURNAL   Nature 419 (6902), 70-74 (2002)
   PUBMED   12214233
REFERENCE   9  (bases 1 to 933)
  AUTHORS   Del Punta,K., Rothman,A., Rodriguez,I. and Mombaerts,P.
  TITLE     Sequence diversity and genomic organization of vomeronasal receptor
            genes in the mouse
  JOURNAL   Genome Res 10 (12), 1958-1967 (2000)
   PUBMED   11116090
REFERENCE   10 (bases 1 to 933)
  AUTHORS   Rodriguez,I., Feinstein,P. and Mombaerts,P.
  TITLE     Variable patterns of axonal projections of sensory neurons in the
            mouse vomeronasal system
  JOURNAL   Cell 97 (2), 199-208 (1999)
   PUBMED   10219241
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AF132114.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AF132114.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="129/SvJ"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 40.02 cM"
     gene            1..933
                     /gene="Vmn1r49"
                     /gene_synonym="V1r5; V1rb2; VRi2"
                     /note="vomeronasal 1, receptor 49"
                     /db_xref="GeneID:24112"
                     /db_xref="MGI:MGI:1344384"
     CDS             1..933
                     /gene="Vmn1r49"
                     /gene_synonym="V1r5; V1rb2; VRi2"
                     /note="vomeronasal organ family 1, receptor 5; vomeronasal
                     organ family 1, receptor B2; vomeronasal receptor VRi2;
                     vomeronasal 1, receptor B2; vomeronasal 1 receptor
                     Vmn1r49; vomeronasal type 1 receptor B2"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 49"
                     /protein_id="NP_036041.1"
                     /db_xref="CCDS:CCDS20351.1"
                     /db_xref="GeneID:24112"
                     /db_xref="MGI:MGI:1344384"
                     /translation="MSKANLLHTDNNMKIILFSEVSVGISANTILFFARLCKLLGENK
                     PKPIDLYIAFLSLTQLMLLITMGLIAVDMFMPWGRWNSTTCQSLIYLHRLLRGLALSA
                     TCLLNVLWTITLSSRSSCLTKFKHKSPHHISGAFLFFYVLYMSFSSHVLVSIIVTPNL
                     TSEDFMYVTQSCSLLPMSYSRESRFSTLMAIRETFLISLMALSSGYMVALLWRHKKQA
                     QHLRSTSLSSKASPEQRATRTIMLLTSLFVVLYILERVVFQSRLKFKDCSVFYFVHII
                     MSHSYATVSPFVFICTEKHIIKFWESIFGRIVNI"
     exon            1..933
                     /gene="Vmn1r49"
                     /gene_synonym="V1r5; V1rb2; VRi2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgagtaaag caaacttact ccacactgac aataacatga aaatcatctt gttctctgaa
       61 gtgagtgttg ggatctcagc taacactatc ctcttttttg cccgcctctg caagctcctt
      121 ggtgagaaca agcctaaacc cattgatctc tacattgctt ttctctccct gacccaacta
      181 atgctactta taactatggg actcatagct gtggacatgt ttatgccttg ggggagatgg
      241 aattctacca catgccaatc ccttatctat ttgcacaggc ttctgagagg cctcgccctt
      301 tctgctacct gtctgctgaa tgtcctttgg actatcacac ttagttctag aagctcctgt
      361 ttaacaaagt ttaaacataa atctccccat cacatctcag gtgcctttct tttcttctat
      421 gtcctctata tgtcttttag cagtcatgtc ttagtatcaa ttattgttac ccccaacttg
      481 acctcagaag attttatgta tgttactcag tcctgctcac ttctacccat gagttactcc
      541 agagaaagca ggttttccac tcttatggcc atcagggaaa cctttcttat cagtctcatg
      601 gccctgtcca gtgggtacat ggtagctctc ctatggaggc acaagaagca ggcccagcat
      661 cttcgcagca ccagcctttc ttcaaaggca tccccagagc aaagggccac caggaccatc
      721 atgctgctca cgagcctctt tgtggttctc tacattttgg aaagagttgt cttccaatca
      781 aggctgaagt tcaaggattg ctcagtattc tactttgtcc atattattat gtcccatagc
      841 tatgccacag tcagcccttt tgtgtttatt tgtactgaaa aacatataat taagttttgg
      901 gagtcaattt ttggcagaat agtaaatatt tga
//
