LOCUS       NM_053220               1069 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus vomeronasal 1 receptor 43 (Vmn1r43), mRNA.
ACCESSION   NM_053220
VERSION     NM_053220.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Amid,C., Rehaume,L.M., Brown,K.L., Gilbert,J.G., Dougan,G.,
            Hancock,R.E. and Harrow,J.L.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1069)
  AUTHORS   Zheng-Fischhofer,Q., Kibschull,M., Schnichels,M., Kretz,M.,
            Petrasch-Parwez,E., Strotmann,J., Reucher,H., Lynn,B.D., Nagy,J.I.,
            Lye,S.J., Winterhager,E. and Willecke,K.
  TITLE     Characterization of connexin31.1-deficient mice reveals impaired
            placental development
  JOURNAL   Dev Biol 312 (1), 258-271 (2007)
   PUBMED   17961533
REFERENCE   4  (bases 1 to 1069)
  AUTHORS   Zheng-Fischhofer,Q., Schnichels,M., Dere,E., Strotmann,J.,
            Loscher,N., McCulloch,F., Kretz,M., Degen,J., Reucher,H.,
            Nagy,J.I., Peti-Peterdi,J., Huston,J.P., Breer,H. and Willecke,K.
  TITLE     Characterization of connexin30.3-deficient mice suggests a possible
            role of connexin30.3 in olfaction
  JOURNAL   Eur J Cell Biol 86 (11-12), 683-700 (2007)
   PUBMED   17728008
REFERENCE   5  (bases 1 to 1069)
  AUTHORS   Del Punta,K., Leinders-Zufall,T., Rodriguez,I., Jukam,D.,
            Wysocki,C.J., Ogawa,S., Zufall,F. and Mombaerts,P.
  TITLE     Deficient pheromone responses in mice lacking a cluster of
            vomeronasal receptor genes
  JOURNAL   Nature 419 (6902), 70-74 (2002)
   PUBMED   12214233
REFERENCE   6  (bases 1 to 1069)
  AUTHORS   Del Punta,K., Rothman,A., Rodriguez,I. and Mombaerts,P.
  TITLE     Sequence diversity and genomic organization of vomeronasal receptor
            genes in the mouse
  JOURNAL   Genome Res 10 (12), 1958-1967 (2000)
   PUBMED   11116090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC125364.1.
            
            On Jul 30, 2011 this sequence version replaced NM_053220.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC125364.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1069              BC125364.1         1-1069
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 40.02 cM"
     gene            1..1069
                     /gene="Vmn1r43"
                     /gene_synonym="V1ra2; V1ra5"
                     /note="vomeronasal 1 receptor 43"
                     /db_xref="GeneID:113847"
                     /db_xref="MGI:MGI:2148510"
     exon            1..1069
                     /gene="Vmn1r43"
                     /gene_synonym="V1ra2; V1ra5"
                     /inference="alignment:Splign:2.1.0"
     CDS             28..1017
                     /gene="Vmn1r43"
                     /gene_synonym="V1ra2; V1ra5"
                     /note="vomeronasal type-1 receptor A5; vomeronasal
                     receptor 1 A2; vomernasal 1 receptor Vmn1r43"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 43"
                     /protein_id="NP_444450.2"
                     /db_xref="CCDS:CCDS57440.1"
                     /db_xref="GeneID:113847"
                     /db_xref="MGI:MGI:2148510"
                     /translation="MSKILFFSPCSLFSHTMNKNSRLHTNSNIGNTFFSEIGIGITGN
                     SFLLLYHILKFIRGHRPRLTDLPIGLLSLIHLLMLLVAAFIATDIFISRRGWDDIICK
                     FLVYLYRVLRGLSLCTTSMLSVLQAIILSPRSSCLSKFKHISLHHILCAILFLSVLYM
                     LISSQLLVSIIATPNLTTNDLTYVTQSCSILPLSYLVESINSTLLAIREYFLISLMFL
                     STWYIVALLCMHRKQTQHLQETRLSLKKSPEQSATQTILMLMTFFVLMTIYDNIVSCL
                     RTMLLNDPTSYSIELFMIHIYATVSPFVFMSNEKHIVNFLRSMGKRMINLNLH"
ORIGIN      
        1 tgaggggaac agagttgcca aggagggatg agtaagattc tgttcttttc tccttgttca
       61 ctgttctcac atacaatgaa taagaacagc agactacata ctaattctaa cattgggaac
      121 acatttttct ctgaaattgg cattggcatc acaggaaaca gcttccttct tctctaccac
      181 atcctcaagt tcattcgtgg gcacaggccc agactcactg acctgcccat tggtctcttg
      241 tccctaatcc acctactgat gcttctggtc gcagcattca tagccacaga catttttatc
      301 tctcggaggg gctgggatga catcatatgt aaattccttg tgtacctgta cagagttttg
      361 aggggtctct ccctttgcac caccagcatg ttgagtgtcc tccaggccat cattcttagt
      421 cccagaagct cctgtttatc aaagttcaag catatatctc ttcatcacat cttatgtgct
      481 attcttttcc tgagtgtcct ctatatgtta attagcagtc aactcttggt atcaatcatt
      541 gccaccccta atttgaccac aaatgacctt acttatgtta ctcagtcctg ctctattcta
      601 cccttgagtt acctcgtgga aagcataaat tctacgctgc tagccatcag ggaatacttt
      661 cttattagtc tcatgttcct ctcaacttgg tacatagtgg cccttttatg catgcacagg
      721 aaacagaccc agcatcttca ggaaaccaga ctttccctaa aaaaatcccc agagcaaagt
      781 gctacccaga ccatcctgat gctcatgacc ttctttgtgc tgatgaccat ctatgacaac
      841 attgtctcct gcttaagaac tatgctcctg aatgatccaa catcttactc tatcgaactc
      901 tttatgattc acatctatgc cactgtcagc ccttttgtgt ttatgagcaa tgaaaaacat
      961 atagttaact ttttgaggtc catgggtaag aggatgataa atttgaatct tcactgatga
     1021 gcaagatcct taagaagagc caatgtgctg ccgtcggaat tgtcattca
//
