LOCUS       NM_053230               1025 bp    mRNA    linear   ROD 06-OCT-2024
DEFINITION  Mus musculus vomeronasal 1 receptor 41 (Vmn1r41), mRNA.
ACCESSION   NM_053230 XM_982625
VERSION     NM_053230.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Del Punta,K., Leinders-Zufall,T., Rodriguez,I., Jukam,D.,
            Wysocki,C.J., Ogawa,S., Zufall,F. and Mombaerts,P.
  TITLE     Deficient pheromone responses in mice lacking a cluster of
            vomeronasal receptor genes
  JOURNAL   Nature 419 (6902), 70-74 (2002)
   PUBMED   12214233
REFERENCE   3  (bases 1 to 1025)
  AUTHORS   Del Punta,K., Rothman,A., Rodriguez,I. and Mombaerts,P.
  TITLE     Sequence diversity and genomic organization of vomeronasal receptor
            genes in the mouse
  JOURNAL   Genome Res 10 (12), 1958-1967 (2000)
   PUBMED   11116090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC051638.24.
            
            On Jul 30, 2011 this sequence version replaced NM_053230.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EX601381.1, EX601448.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-61                AC051638.24        125750-125810
            62-1025             AC051638.24        131313-132276
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 40.02 cM"
     gene            1..1025
                     /gene="Vmn1r41"
                     /gene_synonym="V1ra12; V1rb9"
                     /note="vomeronasal 1 receptor 41"
                     /db_xref="GeneID:113857"
                     /db_xref="MGI:MGI:2148520"
     exon            1..61
                     /gene="Vmn1r41"
                     /gene_synonym="V1ra12; V1rb9"
                     /inference="alignment:Splign:2.1.0"
     exon            62..1025
                     /gene="Vmn1r41"
                     /gene_synonym="V1ra12; V1rb9"
                     /inference="alignment:Splign:2.1.0"
     CDS             90..1025
                     /gene="Vmn1r41"
                     /gene_synonym="V1ra12; V1rb9"
                     /note="vomeronasal type-1 receptor B9; vomernasal 1
                     receptor Vmn1r41; vomeronasal receptor 1 A12"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 41"
                     /protein_id="NP_444460.2"
                     /db_xref="CCDS:CCDS57438.1"
                     /db_xref="GeneID:113857"
                     /db_xref="MGI:MGI:2148520"
                     /translation="MMNKANLLYTDTNMKTFLFSEVSVGISANSMLFIVHICILLGEN
                     RPKPINLYIAFLSLTQLMLLITMGLIVADMFMSQGIWDSITCQSLIYLHRLLRGLTLC
                     ATCLLNVLWTITLSPRSSCLTKFKHKSPHHISGAFLFFCALYMSFSSHLFLSIIATPN
                     LTSEDFMYVTQSCSLLSMSYSRTSMFSTAIAIREAFLISLFALCSGYMVALLWRHKKQ
                     AWDLHSTNVSSKSSPEQRATRTIMLLMSFFVVLYVLENAVFHSRMKFKDGSMLYCVQI
                     IVSHSYATVSPFVLICTEKRMIKFWGSMFGRIVNI"
ORIGIN      
        1 actcccttaa tcctgttcag gatctcctct ggcacagagt cgtcttgtca tgtctatctg
       61 gattttggat atttacttcc tatccacata tgatgaataa agccaaccta ctctacactg
      121 atacaaacat gaaaactttc ttgttctctg aagtgagtgt tgggatctca gctaacagta
      181 tgctttttat agtccacatc tgcatactcc ttggtgagaa caggcctaag cccattaacc
      241 tctatattgc tttcttatct ctaacacaac taatgctgct tataactatg ggactcatag
      301 ttgcagacat gtttatgtct caggggatat gggattctat cacttgccaa tcccttatct
      361 atctgcacag gcttttaagg ggcctcaccc tttgtgctac ctgtctgctg aatgtccttt
      421 ggaccatcac acttagtcct agaagctcct gtttaacaaa gtttaaacat aaatctcccc
      481 atcacatctc aggtgccttt ctttttttct gtgctctcta tatgtctttt agcagtcacc
      541 tcttcttatc aattattgct acccccaact tgacctcaga ggattttatg tatgttactc
      601 agtcctgctc acttctatcc atgagttact ccaggacaag catgttttcc acagcgatag
      661 ccatcaggga agcctttctc attagtctct ttgccctgtg cagtgggtac atggtggctc
      721 tcctatggag gcacaagaag caggcctggg atcttcacag caccaacgtt tcttcaaaat
      781 catccccaga acaaagggcc accaggacca tcatgctgct catgagcttc tttgtggttc
      841 tctatgtttt ggaaaatgct gtcttccact caaggatgaa gttcaaggat ggctcaatgt
      901 tgtactgtgt ccaaattatt gtgtcccata gctatgccac agtgagccct tttgtgttga
      961 tttgcactga aaagcgtatg attaagtttt gggggtcaat gtttggcaga atagtaaata
     1021 tttga
//
