LOCUS       NM_001166720             918 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus vomeronasal 1 receptor 39 (Vmn1r39), mRNA.
ACCESSION   NM_001166720 XM_621716 XM_910182
VERSION     NM_001166720.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 918)
  AUTHORS   Young JM, Massa HF, Hsu L and Trask BJ.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
REFERENCE   2  (bases 1 to 918)
  AUTHORS   Amid C, Rehaume LM, Brown KL, Gilbert JG, Dougan G, Hancock RE and
            Harrow JL.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record is based on preliminary annotation
            provided by NCBI staff in collaboration with Janet Young. The
            reference sequence was derived from AC133199.3.
            
            On or before Feb 3, 2010 this sequence version replaced
            XM_910182.1, XM_621716.2.
            
            Sequence Note: A set of diverse V1R queries was aligned via BLAST
            to the NCBI37 assembly to find candidate V1R-containing genomic
            regions. Open reading frames (ORFs) for V1R genes and pseudogenes
            were then identified.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-918               AC133199.3         111128-112045       c
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 30.65 cM"
     gene            1..918
                     /gene="Vmn1r39"
                     /gene_synonym="EG546903; Gm5993"
                     /note="vomeronasal 1 receptor 39"
                     /db_xref="GeneID:546903"
                     /db_xref="MGI:MGI:3644802"
     CDS             1..918
                     /gene="Vmn1r39"
                     /gene_synonym="EG546903; Gm5993"
                     /note="vomernasal 1 receptor Vmn1r39 pseudogene"
                     /codon_start=1
                     /product="vomeronasal 1 receptor 39"
                     /protein_id="NP_001160192.1"
                     /db_xref="CCDS:CCDS51803.1"
                     /db_xref="GeneID:546903"
                     /db_xref="MGI:MGI:3644802"
                     /translation="MFSLNNVFYVQAVLGTLANIFLLFFYTIIILCHRSKPMDLISCQ
                     LTFIHIIMVITGWDIFTADMFDLLNIENDIICKATSYLNRAMRGLSISITCLLSVFQA
                     VMISPNTSLLAKFKHKLKKYMIYSFFYFWSFNLLFIINRIFYTGAYTNVSDTNQVKVT
                     KYCSLFPMNNIINGLASTIVTLRDVFLVGVMLSTSTYMVIILFRHQRQCKHLHSKSQL
                     RASPEKRATQTILLLVVFFVVLYWVDFIMSFRTFHLWMYDPVMLTVQKFVLNAYPTIT
                     PLIQIISDNRIITMLKNMQKVCHQICKKV"
     exon            1..918
                     /gene="Vmn1r39"
                     /gene_synonym="EG546903; Gm5993"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgttttcat taaataatgt tttttatgtc caagctgtac ttggaaccct agccaatata
       61 tttcttcttt ttttctacac tatcataatc ctgtgtcaca gatctaagcc catggacttg
      121 atctcctgtc aattgacttt cattcacata attatggtca ttactggatg ggatattttt
      181 actgcagaca tgtttgattt actgaacatt gagaatgaca tcatatgtaa ggcaacttct
      241 tacttaaata gggcgatgag aggtctctct atctccatca cctgcctcct gagtgtgttc
      301 caggctgtga tgatcagtcc caatacctct ttgttggcaa aatttaaaca taaactaaaa
      361 aaatacatga tttattcttt cttttatttt tggtctttca atttgttatt catcattaac
      421 cggatcttct atactggtgc ttataccaac gtgagtgata ccaaccaggt gaaggtcact
      481 aaatactgct cactcttccc catgaacaac atcatcaacg gattggcttc aacaattgta
      541 accttaagag acgtatttct tgtaggagtc atgctgagca caagcacata catggtcatt
      601 atcttgttca gacaccagag gcaatgcaag catcttcata gcaaaagcca attgagagca
      661 tcccctgaga aaagggccac ccagaccatc ttgctgctgg tggttttctt tgtagtcctg
      721 tactgggtgg atttcattat gtcattcaga acatttcatt tatggatgta tgacccagtc
      781 atgttgactg ttcagaagtt tgtgctaaat gcctacccca caattactcc tttgatacaa
      841 atcatttctg ataaccgaat aatcactatg ctaaaaaata tgcaaaaagt atgccaccag
      901 atttgtaaaa aagtgtag
//
