LOCUS       NM_001167163             921 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus vomeronasal 1 receptor 246 (Vmn1r246), mRNA.
ACCESSION   NM_001167163 XM_001479224
VERSION     NM_001167163.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 921)
  AUTHORS   Young JM, Massa HF, Hsu L and Trask BJ.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. This
            record has been curated by NCBI staff in collaboration with Janet
            Young. The reference sequence was derived from AC170803.2.
            
            On May 27, 2010 this sequence version replaced XM_001479224.1.
            
            Sequence Note: A set of diverse V1R queries was aligned via BLAST
            to the NCBI37 assembly to find candidate V1R-containing genomic
            regions. Open reading frames (ORFs) for V1R genes and pseudogenes
            were then identified.
            
            CCDS Note: This gene represents one of numerous vomeronasal 1
            receptor genes that are present in the mouse genome. This family
            member lacks transcript support, and therefore this CCDS
            representation is inferred based on paralogous alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-921               AC170803.2         6787-7707
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 10.0 cM"
     gene            1..921
                     /gene="Vmn1r246"
                     /gene_synonym="100042976; Gm4141; Vmn1r106"
                     /note="vomeronasal 1 receptor 246"
                     /db_xref="GeneID:100042976"
                     /db_xref="MGI:MGI:3782317"
     CDS             1..921
                     /gene="Vmn1r246"
                     /gene_synonym="100042976; Gm4141; Vmn1r106"
                     /codon_start=1
                     /product="vomeronasal 1 receptor Vmn1r106"
                     /protein_id="NP_001160635.1"
                     /db_xref="CCDS:CCDS71900.1"
                     /db_xref="GeneID:100042976"
                     /db_xref="MGI:MGI:3782317"
                     /translation="MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLT
                     GSKQRPRQVILGHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSLLVARST
                     NLCSTCVLSIHQFFTLFPVSRGKGKLILRASVQNLASYSFYSCWFFSVLSNIHIPIRV
                     TGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDDTFMSIMVWTSVSMVLLLHRHRQR
                     MQHILTPNQNPRGQAESRATHTILMLVFTFVSFYLLNCICIIFHAFSIHSCLFIRLVS
                     EVLAAVFPSICPLLLIFRDPKDPCSVLFKC"
     exon            1..921
                     /gene="Vmn1r246"
                     /gene_synonym="100042976; Gm4141; Vmn1r106"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtctgctc atggtaaatc cctgaaaacc actgaggaag tggctcttca gctcctcttg
       61 ctttgccagt ttggggttgg gaccgtggcc aatgtctttc tttttgtcca taatttctct
      121 ccagtcttga ctggttctaa acagagaccc agacaggtga ttttaggcca tatggctgtg
      181 gccaatgcct tgactctatt cctcactata tttccaaaca acatgatggc ttttgctccc
      241 aaaactcctc caaatgaact caaatgtaaa ttagaatctt tcagtctcct ggtggcaaga
      301 agcacaaact tgtgttccac ctgtgtcctg agtatccatc agtttttcac tctttttcct
      361 gttagtagag gtaaaggtaa acttatactc agagcaagtg tccaaaattt ggcgagttat
      421 tctttttata gttgttggtt tttcagtgtc ttaagtaaca tccacattcc aattagggtc
      481 actggtccac agataacaga caataacact gactctaaaa gcaacttgtt ctgttccact
      541 tctggattca ttgtaggcat tgtcttgcag tttgcccatg atgacacatt catgagcatc
      601 atggtctgga ccagtgtctc catggtactt ctcctccata gacatcgcca gcgaatgcag
      661 cacatcctca ctcccaatca gaaccccaga ggccaagctg agtccagagc aacccatact
      721 atcctgatgc tggtgtttac atttgttagc ttttatcttc taaattgtat ttgtatcatc
      781 tttcatgcct tttctataca ttcttgtctc ttcataaggc ttgtcagtga ggttctggct
      841 gcagtcttcc ccagtatctg ccccttactg ttgatcttca gagatcctaa agatccttgt
      901 tctgtgctct tcaaatgttg a
//
