LOCUS       NM_134218                927 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus vomeronasal 1 receptor 208 (Vmn1r208), mRNA.
ACCESSION   NM_134218
VERSION     NM_134218.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 927)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 927)
  AUTHORS   Young JM, Massa HF, Hsu L and Trask BJ.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
REFERENCE   3  (bases 1 to 927)
  AUTHORS   Rodriguez I, Del Punta K, Rothman A, Ishii T and Mombaerts P.
  TITLE     Multiple new and isolated families within the mouse superfamily of
            V1r vomeronasal receptors
  JOURNAL   Nat Neurosci 5 (2), 134-140 (2002)
   PUBMED   11802169
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AY065535.1.
            
            Sequence Note: This RefSeq record was created from genomic sequence
            data to make the sequence consistent with the reference genome
            assembly. There are no publicly available transcripts representing
            this gene; the protein is represented because the gene is
            considered to be a protein-coding in the literature, including
            PMIDs 11802169 and 19952141.
            
            CCDS Note: This vomeronasal receptor gene lacks transcript support,
            possibly because vomeronasal receptor genes are expressed in only a
            very small fraction of neurons, and thus, transcript evidence may
            be difficult to detect for all functional genes. This gene, also
            known as V1rh9, is a member of the V1rh sub-cluster, as described
            in PMID:11802169. While the ORF is intact compared to other V1r
            genes, the lack of transcript and functional data for this and
            other similar genes makes it difficult to determine if these
            represent functional genes or pseudogenes. Both PMIDs 11802169 and
            19952141 consider this gene to be functional.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 9.15 cM"
     gene            1..927
                     /gene="Vmn1r208"
                     /gene_synonym="V1rh9; Vmn1r208-ps"
                     /note="vomeronasal 1 receptor 208"
                     /db_xref="GeneID:171252"
                     /db_xref="MGI:MGI:2159668"
     CDS             1..927
                     /gene="Vmn1r208"
                     /gene_synonym="V1rh9; Vmn1r208-ps"
                     /note="vomeronasal 1 receptor 208, pseudogene; vomernasal
                     1 receptor Vmn1r208; vomeronasal 1 receptor, H9"
                     /codon_start=1
                     /product="vomeronasal 1 receptor 208"
                     /protein_id="NP_598979.1"
                     /db_xref="CCDS:CCDS36616.1"
                     /db_xref="GeneID:171252"
                     /db_xref="MGI:MGI:2159668"
                     /translation="MVLKYINKVNKISLFMTVVGTLGNMFVSVNYTFSYWGSSEKKPI
                     YLILIHLAFTNILILLTKGLPKTILAFGLRNFLDDIGCKIIVYLERVARGLSICTSSF
                     LTVVQAVIISPRASGWNRLRPESAWHILPFFSSFWILNALISINLIHSIRSTSLNISQ
                     QINYENSCYFTVENQEIKWIFLILMVLRDALFQVAMGGASGYMVFLLHKHHHHVLYLQ
                     NSKFLYRTPPELRAAQSVLLLMLCFVFFYWTDCAFSLIINISSKDNTLMINTREFLTL
                     CYPTFSPFVLIHRDGLLSKFWHAHWEKLSKCL"
     exon            1..927
                     /gene="Vmn1r208"
                     /gene_synonym="V1rh9; Vmn1r208-ps"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggttttga agtatattaa taaggtaaat aaaatctctc tctttatgac tgtggtcggt
       61 actctgggga acatgtttgt ttctgtgaat tatactttca gttattgggg aagttctgag
      121 aagaaaccca tataccttat tctgatccat ctggctttta caaacatcct aatacttctt
      181 accaaaggat tgccaaagac tattttagct tttggattga gaaatttctt agatgatata
      241 ggctgtaaga tcattgttta cctggagagg gtggcccggg gcctctccat ctgcaccagc
      301 agtttcctca ctgttgtcca ggctgtcatc atcagtccca gagcatctgg gtggaacaga
      361 ctcaggccag agtctgcatg gcacatcctt ccattcttct catccttttg gatactcaat
      421 gctttaatca gtataaacct aattcattcc attagaagta caagtctgaa tatatcacaa
      481 caaataaatt atgagaattc ttgctatttt acagtagaaa atcaggaaat aaaatggatt
      541 tttctcatcc tcatggtcct gagagatgca ttgtttcagg ttgccatggg aggggccagt
      601 ggctacatgg tatttctact ccataagcac caccatcatg tcctctacct tcagaactct
      661 aagtttctct acagaactcc ccctgagctg agagctgctc aaagtgtcct ccttttgatg
      721 ctgtgttttg ttttcttcta ctggacagat tgtgcctttt ctttaattat aaacatctct
      781 tcaaaggaca acaccctgat gataaatact cgagaatttc tgaccctttg ttatccaact
      841 tttagcccct ttgtgctgat tcacagggac gggcttctga gtaaattttg gcatgctcat
      901 tgggagaaat tgagtaaatg tctctga
//
