LOCUS       NM_001167541             906 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus vomeronasal 1 receptor 196 (Vmn1r196), mRNA.
ACCESSION   NM_001167541
VERSION     NM_001167541.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 906)
  AUTHORS   Young JM, Massa HF, Hsu L and Trask BJ.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
REFERENCE   2  (bases 1 to 906)
  AUTHORS   Amid C, Rehaume LM, Brown KL, Gilbert JG, Dougan G, Hancock RE and
            Harrow JL.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 906)
  AUTHORS   Rodriguez I, Del Punta K, Rothman A, Ishii T and Mombaerts P.
  TITLE     Multiple new and isolated families within the mouse superfamily of
            V1r vomeronasal receptors
  JOURNAL   Nat Neurosci 5 (2), 134-140 (2002)
   PUBMED   11802169
COMMENT     PROVISIONAL REFSEQ: This record is based on preliminary annotation
            provided by NCBI staff in collaboration with Janet Young. The
            reference sequence was derived from AL645546.5.
            
            Sequence Note: A set of diverse V1R queries was aligned via BLAST
            to the NCBI37 assembly to find candidate V1R-containing genomic
            regions. Open reading frames (ORFs) for V1R genes and pseudogenes
            were then identified.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-906               AL645546.5         26093-26998
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 8.47 cM"
     gene            1..906
                     /gene="Vmn1r196"
                     /gene_synonym="V1rh19"
                     /note="vomeronasal 1 receptor 196"
                     /db_xref="GeneID:100312484"
                     /db_xref="MGI:MGI:4438447"
     CDS             1..906
                     /gene="Vmn1r196"
                     /gene_synonym="V1rh19"
                     /note="vomeronasal 1 receptor Vmn1r196; vomeronasal type 1
                     receptor H19; vomeronasal 1 receptor, H19"
                     /codon_start=1
                     /product="vomeronasal 1 receptor 196"
                     /protein_id="NP_001161013.1"
                     /db_xref="CCDS:CCDS49219.1"
                     /db_xref="GeneID:100312484"
                     /db_xref="MGI:MGI:4438447"
                     /translation="MKLKIVLNISEITVFLLFTGLGTVANVSIFVNYICTFMGSGKKS
                     IYLILIHLALTNITLLFSKVMPVTIAALGLRHFLGDIGCHVIVYLERMARGLSICTSS
                     LLTVVQAVIMSPRASWWGRLRLRSKWHVLLSLFFLWILNMLISMNFLLSIRDTATDTL
                     QLRQISEYCYFKKESQRRNNIFLILMVLRDAVFQGAMGGASGYMVFLLHKHHQHVLYL
                     QNSKLLYRTPPELRAAQSVLLLMLCFVFFYWTDCVVSLYLSSSSNNDSLTIHFQEFLT
                     IGYAVLSPFMLIQRDGLLAECCHAR"
     exon            1..906
                     /gene="Vmn1r196"
                     /gene_synonym="V1rh19"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagttaa aaatagtttt gaatattagt gaaataactg tattccttct tttcactgga
       61 cttggcactg tggcaaatgt ttccattttt gtgaattata tatgtacttt tatggggtct
      121 ggaaaaaagt ctatatacct tattcttatc cacttggctt tgacaaatat tacattgctt
      181 ttttccaagg taatgccagt gacaattgca gctttagggt tgagacactt tctaggtgat
      241 ataggctgtc acgttattgt ttatctagaa aggatggccc ggggtctgtc catctgcacc
      301 agcagtctcc tcacagtggt ccaagcagtt atcatgagcc ccagagcctc ctggtggggg
      361 aggctcagac taaggtctaa atggcatgtg cttctctctc tgttcttcct atggattcta
      421 aatatgttga tcagcatgaa cttcctcctt tccatcagag acacagctac agacacctta
      481 caactgaggc agattagtga atattgttat ttcaaaaaag aaagtcagag aagaaacaac
      541 atttttctca tcctcatggt cctgagagat gcagtgtttc agggtgccat gggaggggcc
      601 agtggctaca tggtatttct tctccacaag caccaccagc atgtcctcta ccttcagaac
      661 tccaagcttc tctacagaac tccccctgag ctgagagctg ctcaaagtgt cctccttctg
      721 atgctctgtt ttgttttctt ttattggaca gattgtgttg tttctttgta tttatcttct
      781 tcctcgaata atgactcctt aactattcat tttcaagaat ttctgaccat tggttatgca
      841 gttcttagcc catttatgct gattcagagg gatggacttc tggctgaatg ttgccatgct
      901 cgttaa
//
