LOCUS       XM_006504438            2926 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus VGF nerve growth factor inducible (Vgf),
            transcript variant X7, mRNA.
ACCESSION   XM_006504438
VERSION     XM_006504438.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006504438.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2926
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..2926
                     /gene="Vgf"
                     /gene_synonym="Gm1052"
                     /note="VGF nerve growth factor inducible; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 mRNAs, 18 ESTs, 236 long SRA reads, 3 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:381677"
                     /db_xref="MGI:MGI:1343180"
     CDS             561..2414
                     /gene="Vgf"
                     /gene_synonym="Gm1052"
                     /codon_start=1
                     /product="neurosecretory protein VGF isoform X1"
                     /protein_id="XP_006504501.1"
                     /db_xref="GeneID:381677"
                     /db_xref="MGI:MGI:1343180"
                     /translation="MKTFTLPASVLFCFLLLIQGLGAAPPGRPDVFPPPLSSEHNGQV
                     AEDAVSRPKDDGVPEVRAARNPEPQDQGELFQGVDPRALASVLLQALDRPASPPSVPG
                     GSQQGTPEEAAEALLTESVRSQTHSLPAPEIQAPAVAPPRPQTQDRDPEEDDRSEELE
                     ALASLLQELRDFSPSNAKRQQETAAAETETRTHTLTRVNLESPGPERVWRASWGEFQA
                     RVPERAPLPPPVPSQFQARMSESAPLPETHQFGEGVSSPKTHLGETLTPLSKAYQSLG
                     GPFPKVRRLEGSFLGGSEAGERLLQQGLAQVEAGRRQAEATRQAAAQEERLADLASDL
                     LLQYLLQGGARQRDLGGRELQETQQERENEREEEAEQERRGGGEDDVGEEDEEAAEAE
                     AEAEEAERARQNALLFAEEEDGEAGAEDKRSQEEAPGHRRKDAEGAEEGGEEDDDDEE
                     MDPQTIDSLIELSTKLHLPADDVVSIIEEVEEKRKRKKNAPPEPVPPPRAAPAPTHVR
                     SPQPPPPAPARDELPDWNEVLPPWDREEDEVFPPGPYHPFPNYIRPRTLQPPASSRRR
                     HFHHALPPARHHPDLEAQARRAQEEADAEERRLQEQEELENYIEHVLLHRP"
ORIGIN      
        1 atcctaccac acgggggcgg cagaacaagt gcggacgcgg gcgaggcagc gcaaggtggt
       61 tctcgtccgt ttcacagtag ggacccctgt ctccttatac agtccccctc tcatggccaa
      121 ttttcacccc ttcccatggc tgacgaaata aatggctgca gagagctgat ggggtttctt
      181 ctgggaaagt caagccactg atggaaggga gaagccactg ctggttatag agagaaagca
      241 cgaccctttc caaggtgatt acccaaaccg caagatccac ccatctgcgc tgaccctggg
      301 cgggcatccc gcaccgcaaa tccaccccct cctctcaggc agaggcggcg cgggcgctgt
      361 ccagcgtgct gaagccggag cgagagcgct gttgctgacc cagctgagcc cagcttctag
      421 gacgccagcc ctcgaccatc gctcatactc cagccacgga acagagccaa ggcggaccgg
      481 tcccgacttt ccccctgccc cgaccctcct ctccacctcc cgccgtcgtg acaccggctg
      541 tctctggcag cccgttggtc atgaaaacct tcacgttgcc ggcatccgtc ctcttctgct
      601 tccttctact gatccagggg ttgggagcag cgccccccgg gcgccccgat gtttttcctc
      661 ctcccctcag ctctgagcat aatgggcagg tagctgagga cgcagtgtcc cggccaaagg
      721 atgacggcgt accagaggtc cgagctgctc ggaatcccga gcctcaggac cagggagagc
      781 tcttccaggg cgtggatccc cgggcgctgg cctcggtact gttgcaggca ctggaccgtc
      841 cggcctcgcc cccgtcggtc ccgggaggtt cccagcaggg aacacccgaa gaagcagcag
      901 aagctctgct gaccgagtcc gtgcgcagtc agacccatag cctcccggca ccagaaatcc
      961 aagcgcccgc tgtggccccc cctcgccctc agactcagga ccgcgatccc gaggaggacg
     1021 accgctcaga agagctggag gcgctagcat ccttgctcca agaacttcga gatttcagtc
     1081 cgagcaatgc taagcgccaa caagagacgg cggcagcaga gactgaaacc cgcacgcaca
     1141 cgctgacccg agtcaatctg gagagccccg ggccagagcg cgtgtggcgc gcttcctggg
     1201 gagagttcca ggcgcgcgtt ccggagcgcg ctcctcttcc gcccccggtc ccttcccaat
     1261 tccaggctcg aatgtccgaa agcgctcccc ttcccgaaac tcatcagttc ggggaaggag
     1321 tgtcctcccc taaaacacat ttaggtgaga ctttgacacc cttatccaag gcgtatcaaa
     1381 gtctaggtgg ccccttccct aaggtgcgcc ggctcgaggg ctcattcctg ggcggctccg
     1441 aggcaggaga gcgcctgctt cagcaaggat tagctcaggt agaggcaggg aggagacagg
     1501 cggaggccac ccggcaggcc gcggcgcaag aagagcggct ggccgatctc gcctccgacc
     1561 tgctgctcca gtatctgttg cagggcggag cccggcagcg cgatctcggg ggtcgcgagc
     1621 tgcaggagac gcagcaagag cgggagaacg agagggagga ggaggcagag caggagaggc
     1681 gaggtggtgg ggaggacgat gtgggggaag aggatgagga ggcggcggag gcggaggcgg
     1741 aggcagagga ggcggagagg gcgcggcaga acgcactcct gttcgccgag gaggaggacg
     1801 gggaagccgg agccgaggac aaacgctccc aggaggaggc gccaggccat cggcggaagg
     1861 atgctgaggg ggcagaggag ggcggggagg aggatgacga cgacgaggag atggatccgc
     1921 agacgatcga tagtctcatt gaactgtcca ccaaactcca cctgccagca gacgatgtgg
     1981 tcagcatcat cgaagaggtg gaggagaaac ggaagcggaa gaagaacgcc cctcccgagc
     2041 cggtgccgcc tcccagggct gccccagccc cgacccatgt ccgctctccg cagcccccac
     2101 ctcccgcccc agcccgggat gagttgccgg actggaacga agtgctccca ccctgggatc
     2161 gggaggagga tgaggtgttt cccccggggc cctatcaccc cttcccaaac tacattcggc
     2221 cgcggacact gcagccgccc gcatcctccc gccgccgtca cttccatcac gcgttgccac
     2281 ctgcgcgcca ccatccggat ctggaggccc aggccaggcg cgcgcaggag gaagcggacg
     2341 cggaggagcg ccggctgcag gagcaggagg agctggagaa ttacattgag cacgtgctgc
     2401 tgcaccgccc gtgacccgcc ccggccccgc ctccgcgcgc tcgctcccag ctgcgcgcgc
     2461 caccacgccc ccctccgtgt cgctcctcct ccctctcagt gtttgcatgc gccctggctc
     2521 cgcccctcgg ctgccgcccg gccccgcccc acaaggcccc gcctcgggtt ctgtcggcac
     2581 cggacctgtc agacttccct ggggtctgca gtctagaaca cacaaaactc gcaggcaatc
     2641 ccggggccag cccaggcggg tgtgtggttt gtgcgagtcc ccttatatcc ccacttcctc
     2701 caggggcctc gtccccatct agtttctcta gcgacttccc agtcccagac gggaaaggct
     2761 gttctattta atcgtgtgaa gtgtctgtct cccagccttg gggcccccgg agcctcccct
     2821 cttctccaaa ttgctgtgaa cttacccact tctccttctc tgttgtaaat acccctcacg
     2881 gaggaaatag ttttgctaag aaataaaagt gactatttta ttagga
//
