LOCUS       NM_001081101            7343 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus UV stimulated scaffold protein A (Uvssa), transcript
            variant 1, mRNA.
ACCESSION   NM_001081101 XM_132005
VERSION     NM_001081101.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 7343)
  AUTHORS   Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Koseki,H., Hiraoka,S.,
            Saga,Y., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: III. the complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (4), 167-180 (2003)
   PUBMED   14621295
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB590196.2, AK016722.1, AK040506.1, AC145072.9 and BM941364.1.
            
            On Oct 31, 2007 this sequence version replaced NM_001081101.1.
            
            Transcript Variant: This variant (1) represents the longest
            transcript. Variants 1 and 2 both encode the same protein.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC137803.1, SRR9219381.21085.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-464               BB590196.2         3-466
            465-2481            AK016722.1         126-2142
            2482-5424           AK040506.1         2382-5324
            5425-7180           AC145072.9         124486-126241       c
            7181-7343           BM941364.1         314-476
FEATURES             Location/Qualifiers
     source          1..7343
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 17.6 cM"
     gene            1..7343
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /note="UV stimulated scaffold protein A"
                     /db_xref="GeneID:71101"
                     /db_xref="MGI:MGI:1918351"
     exon            1..307
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /inference="alignment:Splign:2.1.0"
     exon            308..407
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /inference="alignment:Splign:2.1.0"
     CDS             310..2463
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /codon_start=1
                     /product="UV-stimulated scaffold protein A"
                     /protein_id="NP_001074570.1"
                     /db_xref="CCDS:CCDS39064.1"
                     /db_xref="GeneID:71101"
                     /db_xref="MGI:MGI:1918351"
                     /translation="MDQKLSQLIEELTTSGESQLNAQKMKELKKICKSSEEQLSHAYR
                     LLITQLTQGHAEIRLSAFQIVDELFTRSHQFRMLLVSDFQEFLELTLGTDSDRPLPPP
                     REAAQRLRQAAMQAVEGWNEKFGQAYKKLALGYHFLKHTKKVDFRDINVRTVAERKRE
                     EEKQKHLDKIHRESADRAKREMEEMYDEIECCLTEVENCFKLLVPLDFVPCPEDKFFG
                     EASSMTEGYAPCPLSPDLATPRESGLSGPQDEEQPCCSKDLVASAYHVGSVVGLKALP
                     QTAMKDSSRDEDEPSDPDDFLRSHGLGSHKYTLDVEVPSDGLKVQENEDNLAVLHAAR
                     DSLKLIQNKFLPTVCSWVQRFTRAGTYSAHLKQAIDLKMELELALKKYEELNIEPGRG
                     QRSRTEALEDSEDEDQDFVEVPEKEGYEPRIPDHLRAEYGLEPKAPLKTLEKGTAVCK
                     LQERTRMRREEEASDPTSAAAQMLRLQDCLSSPSPSSTRVLPGPEEAQKQAERARAPI
                     VPFGVDLCYWGQEQLTAGKILKSDSQHRFWKPSEVEEEVDSAHVSEMLHSRHITFSGT
                     FEPVQHKCRALRPNGRLCERQDRLKCPFHGKIIPRDDKGQPLNPEDRAREQRQQLQRQ
                     QAHPDWQDPEFLKDVEAATGVDLGSSRSSKKGKGKKKKHPNLTDLRERTNTARARLEK
                     KVFAKAAVQRVVAAMNQMDQKKHEKFANQFNYALK"
     exon            408..738
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /inference="alignment:Splign:2.1.0"
     exon            739..859
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /inference="alignment:Splign:2.1.0"
     exon            860..1255
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /inference="alignment:Splign:2.1.0"
     exon            1256..1368
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /inference="alignment:Splign:2.1.0"
     exon            1369..1497
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /inference="alignment:Splign:2.1.0"
     exon            1498..1603
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /inference="alignment:Splign:2.1.0"
     exon            1604..1775
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /inference="alignment:Splign:2.1.0"
     exon            1776..1898
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /inference="alignment:Splign:2.1.0"
     exon            1899..2082
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /inference="alignment:Splign:2.1.0"
     exon            2083..2194
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /inference="alignment:Splign:2.1.0"
     exon            2195..2369
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /inference="alignment:Splign:2.1.0"
     exon            2370..7326
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      6524
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
     regulatory      7305..7310
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /note="hexamer: AATAAA"
     polyA_site      7326
                     /gene="Uvssa"
                     /gene_synonym="4933407H18Rik; D330017J19Rik; Kiaa1530;
                     mKIAA1530"
                     /note="major polyA site"
ORIGIN      
        1 gtaacagaga gagctctgtc tacaccggaa ggggtgggcg aaacaagctg ctgcatcctg
       61 cgggccgtgt caccggggct gagggacgct ggtactacgt ctcctgaggc agcgagtgcg
      121 gcggactgag ggtcgtggct ggtcagattc tcggcccgca gggtcggatc agtcgccccc
      181 gcagttgtcc agagactgtc gcttgcagag agcgagtttc ttgtgcggcc agtttgctta
      241 aaatttagtg acatttcccc ttagcccgcg gtaacgtcac ccacacagct gaccgaagac
      301 tgccggaata tggatcagaa actttcacag ttgatagagg agctcacaac ttcaggagaa
      361 tcccaactca atgctcagaa aatgaaggaa ctgaagaaaa tttgcaagtc ttccgaggag
      421 cagctgagcc atgcctaccg cctgctgatc acacagctga cccagggcca tgccgagatc
      481 cgcctctcgg ccttccagat cgtggatgag ctcttcaccc gctctcatca gttcagaatg
      541 ctgcttgttt ctgacttcca ggaattcctc gagctcacac tgggcacaga tagtgaccgt
      601 cccctgccac cccctcggga ggcagctcag aggctaaggc aggcagccat gcaagctgtg
      661 gaaggttgga atgagaagtt tgggcaggcc tataagaagc tagccttggg ctaccacttc
      721 ctaaaacaca ccaaaaaggt agattttcgg gatataaatg ttaggactgt ggcagaaagg
      781 aagcgagaag aggagaagca gaagcacctg gataaaatcc acagagaaag tgcagaccgg
      841 gctaagaggg aaatggaaga aatgtatgat gaaattgaat gctgcctgac agaagtggag
      901 aactgcttta agctgctggt gcccttggat tttgtaccat gcccagagga taaattcttt
      961 ggtgaagcgt ctagcatgac agagggctat gctccttgcc ccttgagccc ggacctggcc
     1021 actccccgtg agtctggtct ctctggaccc caggatgaag agcagccatg ctgtagcaag
     1081 gacctggttg cctctgcata ccatgtagga tctgttgttg gtctgaaggc actaccccaa
     1141 acagccatga aagactcctc cagggatgag gacgaaccca gcgacccgga tgatttcctg
     1201 cggagccatg gactgggttc ccacaagtac acgctggatg ttgaagtccc ctcagatggt
     1261 ctgaaggttc aggagaatga agacaacctt gctgtgctcc atgctgctcg ggactcgctc
     1321 aaactcatcc agaacaagtt tctgccaact gtgtgctcct gggtccagcg gtttacccgt
     1381 gcagggacct acagtgcaca tttaaaacag gccattgacc tgaaaatgga actggaactt
     1441 gccctgaaga agtatgaaga actgaacatt gagcctggga gaggacagag gagcaggaca
     1501 gaagcactgg aggacagtga ggatgaggat caggactttg tggaggtccc agagaaagag
     1561 ggttatgagc ctcgaatccc tgaccatcta cgagctgaat atgggctgga gccaaaggcc
     1621 ccactgaaga ctctggagaa aggtacagct gtatgtaagt tacaggagag gaccaggatg
     1681 agaagagaag aggaggcctc agaccccacc tctgcagctg cccagatgtt gcggctccag
     1741 gactgcttat catctccctc tccctcctct accagggtac ttcctgggcc agaggaagcc
     1801 cagaagcaag cagagcgagc ccgagcaccc attgtaccct tcggagtgga cctgtgttac
     1861 tggggccagg agcagctaac agctggaaag attcttaaat ctgactctca acaccgcttc
     1921 tggaaaccca gcgaggtgga ggaagaggtg gacagtgccc atgtttctga gatgctccat
     1981 agccgacaca ttaccttttc agggacgttt gagcctgtgc agcacaagtg ccgggccctg
     2041 aggcctaatg gcaggctctg cgagcgccag gatcgactga agtgcccatt ccatgggaag
     2101 atcatcccca gagatgacaa ggggcagcct ctcaacccag aagacagagc ccgtgaacaa
     2161 aggcagcagc ttcagcggca gcaggcacat ccagattggc aggaccctga gtttctgaag
     2221 gacgtggaag cagccacagg ggtggacctc ggttcatcca ggtccagcaa gaaaggcaaa
     2281 gggaaaaaga agaagcaccc taacctcacg gatctgcgag agcgcaccaa caccgcccgg
     2341 gcccgccttg agaagaaggt ctttgccaag gcagccgtgc agagagtagt tgctgccatg
     2401 aaccagatgg accagaagaa acacgagaag tttgcaaacc aatttaatta tgcgctgaag
     2461 taaaagggtg tgggtgtgct gaatatgctg tggtcccctt tggccgtcag ctcttctccg
     2521 ttcgttagct tactaggata ggaaggagaa tagacttaag tctgagtaga atcagagctt
     2581 gttttttctg tatgtaacaa tgtagtgatg cattaaaata ctctccagga ggccagggga
     2641 tatggtttag tggtgaggcc agggtttgat tcccaaccat tttaaccaca catgtggtac
     2701 ctcacctgta atcccagcac ttggacataa acaggacctg aatcctaggc cagtatggat
     2761 aacagagcaa gactgcttga gaaacaagaa caaaaagcca gatgaggtga cgcacacctg
     2821 taatttttac acttaacagg cagggcagga agatcaatac aagttcaaag ctaacctagt
     2881 tgccaggcat ggtaggcaca tctttaatcc cagcactcag aaggcaaggc aggtggatct
     2941 ctgagtttga ggccaggctg ttctacagag tgagttccag gacagccagg gctacacaga
     3001 gaaaccctgt ctttaaaaca aacaaacagc taagctagtc taagttgtaa attctaagcc
     3061 agccaaactt acataagcag agtatgtctc tgagggaaaa aaatatccct tcaggatgac
     3121 gtacctgcat tggagttgga taggggcagg cactccatct ggccagccct tgggcagtaa
     3181 gtgtgtccct agtggtgcta tgtactttat gatgccttca gcaatccacc ctttcatgca
     3241 tatgctgttt aatacacatg tccagctcct ggcaccactc tggaccaggt gtgttgagcc
     3301 ctaactcaca taccatgtag tcacccaggt tatgcacagt gtataacaag tgactccact
     3361 ggcttccaga actttagtgt tcagacaaac tgcctgacca cctcgaagcc cgctttctct
     3421 ttccatgcct atgcatttag agtaattggg tctgcggctt ttgtttttgt tttgagatgt
     3481 ggtctcttta tgtagctctg gcagtcttag agcccacagt gtagaccagg ctggtctcca
     3541 actcagagat cctcctgcct ctgcctcttc agtattgaga ttaagggcgt gtacgatggc
     3601 tcctggctga gtatgccctt ctgttccagc ttctttgcct ttgaagtttc ttccatgttg
     3661 tgatagcagt ccttcagtcc tgcttcttac acacacggac ctcagcagag gacaagggag
     3721 gtggctcagc aggtaaagca cttgcatgta attatgagga ctgagtccat ataaaagtca
     3781 agtggttatg gtaatctgct tgtaatcctg cccttggtga gaggagacag gatctctggg
     3841 gcaaactcag taaggagact agccaaaatc agtgcattct ggattcagca agagactccg
     3901 cctctgtaaa tagagtggag aacagtgaag ggaaacactc aactacaacc tttggcctat
     3961 aatatgaaaa ttcacatatg cccatagaca tctgcccaca cataggtaaa cacacacaca
     4021 cacaaaatca cagtgaatgg agtcatattt tgtcattgcc acacccaccc tctcatttga
     4081 gacatggtct ctctttggaa ccctgactgt ccggtaactc attttgtaga tcacgctggc
     4141 ctccaattca gagatcctcc tgcttctgcc tcccaagccc cgggactaaa ggcgccacca
     4201 tggcctgtct ccatggattt gttattgatg tttggtctgt tcctacctta gggctaccgt
     4261 gaatatctgt gcttttttgt gtgtggacaa ctgtttctgt acatcaccga tgcgtatagt
     4321 aacctccttg tgaggggcta agctgttgga tggtggctgc accatttaca ctcactctgc
     4381 tctgcttcct gagggcttca tgccatcact ggtgtctttg tttcttttgc ttttctgaga
     4441 attctataca agaggactgt gctcacatca tttccacctc tcctgccttc tccaggttct
     4501 cccatgccct tttttcaaat tcatgatctc ttctttgtca tcacatatga agacagttgc
     4561 tgttatcttt agcagtcatt ctcaccgtca tgttctggga ggcagctaag ggcaacaaca
     4621 ttcacctatg tcattttgat agtctcttaa ctccctggcc acaacttagg agatttcctg
     4681 ttcgtataca tggacttttg ttaaatagtg tctacttaag gattttttta aaatcacatg
     4741 attatctcaa tagatgcaga aaacaccttt gacaaaatcc aatataataa aataataaaa
     4801 gtcctagaga gactaggaac agggaacatg taaaggaaac ccatcaaaac aacagctgat
     4861 tcccagtgga agttgtaaaa ggcagaagag tctggaccag ggtacttcaa ggtctaaaag
     4921 accatggata ccaacttaca gtactgtacc cagcataact tcctgccata gttgaaggaa
     4981 agaggaaaat gctctgtggt ataaacacgc caaaagaatt catgcccacc aaactggtcc
     5041 tagagaggat accaaaagca attctttaga ctgaagagag gaaaaaggac aaggaagaca
     5101 agtgaagctg taattgctga agcacaaaag aggatgaatg caaagagcaa accaggagcc
     5161 agcacacacc ttaaaccaga accaggagcc agcacacacc ttaaaccaga accaggagcc
     5221 agcacacacc tttaaccaga acaaggtttt aataatatcc ttagctcccc agtcaagaaa
     5281 cactggtttg ttgaatggat tgagaacaaa gatttaaaga tcggggccac cttaaagcac
     5341 aaggatagaa aaaagtatcc caagcaagtg caaagaggaa ggaagcaggt gtcactcact
     5401 accttttttt tttttttttt tttttttgag actgtgtctt cctactcagt cctagcctgc
     5461 tatataaacc aggtgggcct tgaactcaca aagatctgcc tgcttcttcc ttccaaatgg
     5521 tggaattaag gacaaggagt ctttgtttta atcaagagaa caattgacca tgaatacatt
     5581 acagttctgt atgcaccaag ctctagaaca cccaatttca taagaaacat gccactgaac
     5641 ttaaagacac agattactcc agttccgtat tagtgggtga tttctgtacc ccactttatc
     5701 cagaatacag gccatctgaa cagcaacaac aaaaaagaat agagatatca gatttaagtg
     5761 atgtcataca gcaaatggag ctaacaaata tgtacaaaat gtttgaccca aacactaaag
     5821 aatatacatt ctacacagca ggccaaatac ccaaaataga tcatattggc caggaggtgg
     5881 tagtccatac ctttaattca agcactcagg agacaggggc aagcaaatct tgagtttgag
     5941 atcagagtgg tctacagaat gggttctaag atagccaagg atacccagaa aaaccctgtc
     6001 tcaaaaaatg aaaataataa actagatcac ataatttgac acaaaacata tcttaagttc
     6061 agaaaattga aaaattttaa tatattttat caagccacaa tgcaataaag cttcaaatca
     6121 atagcaaaca aattcctggt aattatataa attcatgaag attgaacaac acattactaa
     6181 atagtgaatg ggtcaaaaaa gaatcaagaa aaaatgtttt aatcctgaag tcaaatacaa
     6241 ctaaaaacaa caaaacctct ggatacatag aatggcaacc tatgaggcac taactacctt
     6301 attaaaaatc agaaaaagca caaataaatg acttaatgat gtaattcaat gatttgtaaa
     6361 aacaggaaca agtctaaatt gagtagagtg gaatacctag taaaaacaac ataaattaat
     6421 gaaattggaa gaaaaaaaat atcaatgaat ctaagagctg gttctttgac aagccattgg
     6481 cagattctag ctatccagct aaccaaaatc aaaataaaca aaaataaaga cgtgattcaa
     6541 aggaatagaa ttcaagttga actggaacca tcatggcacc aatgaaatcc agtcctgtag
     6601 aggagtactt taaaaaccta gtctccatta agttagaaac tagaagaagt gcacaaggca
     6661 cgcatgtggt gcacacacat gcaagcaaaa cattcatgaa ttttaattta aaaaaggaat
     6721 ggatggattt ctagagtaat ccaaactacc aaagtttaag aaagtgacaa cctaaacaga
     6781 cctataacat tataccacca gtgcctccta agcagacctg tcacaaggaa ggagattgga
     6841 acagtaaaaa aaaaaaaaaa aaaacccagg cccagataga ttcacaggaa aattccacca
     6901 gattttcaca gacctacagc caatactaaa aaataaacaa aaaaccagaa ggaacatttt
     6961 taatgccaaa aaccatgtag gcaacaacaa caatatctct gatataggca aatatctctg
     7021 atggacatag atgcaaaaat ctaataaaac actgcaagcc gagtatagcc atattagttc
     7081 acccaagaaa ggactggatg taggtgacga acacttgagt catgaaagaa gacagttaac
     7141 tcttctttct agttttacct cttttgtgtg tgtggttaag tgcataaaac aatatttgat
     7201 ggtgaaagtg gaatccagtg tgaagctcca cagctttcat tgagatggat aaactttggg
     7261 tctggttaat ttcactgtat gatgtttttt ataagttttt ttgtaataaa acttttcctt
     7321 ttgttaaaaa aaaaaaaaaa aaa
//
