LOCUS       XM_011248589            4660 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus ubiquitously transcribed tetratricopeptide
            repeat containing, Y-linked (Uty), transcript variant X22, mRNA.
ACCESSION   XM_011248589
VERSION     XM_011248589.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000087.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011248589.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4660
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="Y"
     gene            1..4660
                     /gene="Uty"
                     /gene_synonym="Hydb; mKIAA4057"
                     /note="ubiquitously transcribed tetratricopeptide repeat
                     containing, Y-linked; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 10 ESTs, 64 long
                     SRA reads, and 95% coverage of the annotated genomic
                     feature by RNAseq alignments, including 2 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:22290"
                     /db_xref="MGI:MGI:894810"
     CDS             221..2908
                     /gene="Uty"
                     /gene_synonym="Hydb; mKIAA4057"
                     /codon_start=1
                     /product="histone demethylase UTY isoform X16"
                     /protein_id="XP_011246891.1"
                     /db_xref="GeneID:22290"
                     /db_xref="MGI:MGI:894810"
                     /translation="MKSYGLSLTTAALGNEEKKMAAEKARGEGEEGSFSLTVEEKKAL
                     CGLDSSFFGFLTRCKDGAKMKTLLNKAIHFYESLIVKAEGKVESDFFCQLGHFNLLLE
                     DYSKALSSYQRYYSLQTDYWKAFQNHFWWWKITREVWKLLLRKFRNAAFLYGLGLVYF
                     YYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKMNTDYESSLKHFQLALIDCNV
                     CTLSSVEIQFHIAHLYETQRKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMD
                     LIGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSE
                     ASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQPQDAIK
                     CYLNAARSKSCNNTSALTSRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAEL
                     TSRQGAMNTAQQSVSDTWNSVQTASHHSVQQKVYTQCFTAQKLQSFGKDQQPPFQTGS
                     TRYLQAASTNDQNQNGNHTLPQNSKGDAQNHFLRIPTSEEQKIINFTKESKDSRSKSL
                     TSKTSRKDRDTSNICVNAKKHSNHIYQISSVPISSLNNKESVSPDLIIVDNPQLSVLV
                     GETIDNVDHDIGTCDKVNNVHLAIHKKPDNLSASSPSSAISTETLSLKLTEQTHIVTS
                     FISPHSGLHTINGEGHENLESSASVNVGLRPRSQIIPSMSVSIYSSSTEVLKACRSLG
                     KNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCIN
                     PKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQLLQPADENWDPSGTKKI
                     WRYENKSSHTTIAKYAQYQACSFQESLRMGSLTLQNRVC"
ORIGIN      
        1 aacggttgct tccattggaa agcctggctt tagggagagg ttatggacgt tacgtgcggt
       61 tcacactgac ggtattataa caactttatg cggatgctag cgaagtttga tattctaaga
      121 acttcgctta ggttctgcaa caatgagttc ttcttgcgtt caccatctgc gtggtaatgt
      181 gaccagatag cctctgccgc tttctccttt gccagtttcc atgaaatctt acggattatc
      241 tctcactact gctgccctag gtaatgagga aaagaaaatg gcggcggaaa aggctagagg
      301 cgagggcgaa gaggggtcct tcagtctcac agtcgaagag aagaaggcgc tttgtggatt
      361 agatagcagc ttcttcgggt tcttgacccg atgcaaagat ggcgccaaga tgaagacgct
      421 gttgaacaag gcaattcact tctatgagtc tttaatagta aaagctgaag gaaaagtgga
      481 atcagatttc ttttgtcaat taggtcactt caatctctta ctggaagatt attcaaaagc
      541 attgtcatct taccagagat actacagttt acagactgac tactggaagg cattccagaa
      601 ccacttttgg tggtggaaaa ttaccaggga agtttggaaa ttattgctga ggaagttcag
      661 gaatgctgcc tttttatatg gtcttggttt ggtctatttc tactacaatg catttcagtg
      721 ggcaattaga gcttttcagg aagtccttta tgttgaccct aatttttgca gagccaaaga
      781 aatccattta cgacttggtt ttatgttcaa aatgaataca gattatgaat ctagtttaaa
      841 gcattttcag ctggccctga tcgactgtaa tgtctgtact ttgtccagtg tcgaaattca
      901 gtttcatatt gctcacttat atgaaaccca gaggaaatac cattctgcaa aggcagccta
      961 tgaacaactt ttacagattg aaagcttgcc atcacaagtc aaagcaactg tattgcaaca
     1021 gttaggttgg atgcaccata atatggatct aattggagac aataccacca aagagagata
     1081 tgctattcag tatctccaaa agtcattgga ggaagatcct aattctggtc aatcttggta
     1141 tttccttgga aggtgttact catgtattgg gaaggttcag gatgcctttg tatcttacag
     1201 gcaatccatt gataaatcag aagcaagtgc agacacatgg tgttcaatag gtgtgctgta
     1261 tcaacagcaa aatcaaccta tggatgcctt gcaagcctat atatgtgctg tacagttgga
     1321 tcatggacat gcagcagcct ggatggactt aggtattctt tatgaatctt gcaaccaacc
     1381 ccaggatgcc attaaatgct acttaaatgc agctcggagc aaatcttgta ataacacctc
     1441 tgcacttaca tcaagaatta agtttttaca ggctcagttg tgtaaccttc cacaaagtag
     1501 tctacagaat aaaactaaat tacttcctag tattgaggag gcatggagcc taccaatacc
     1561 cgcagagctt acctccaggc agggtgccat gaacacagca cagcagagtg tttctgatac
     1621 ctggaatagt gtccagacag cttcacatca ttcagtacag cagaaagttt atacacagtg
     1681 cttcacagca cagaaattac agagttttgg taaagatcaa caacctccat ttcaaactgg
     1741 gtccacacga tatctccaag cagctagcac taatgatcag aatcagaatg gaaatcatac
     1801 tctgcctcag aattcaaaag gggatgctca aaatcacttc ttacgtattc ctacctcaga
     1861 agaacaaaag atcattaact ttaccaaaga gagcaaggat tcaagaagta aatccttgac
     1921 ttctaaaaca agtaggaaag atagagacac atctaatatc tgtgttaatg caaagaagca
     1981 ttctaatcat atttatcaga tctcatcagt tccgatttcc agccttaata ataaagaatc
     2041 tgtgtcacca gatttaataa ttgtagacaa tcctcagctt tctgtcttag ttggagaaac
     2101 tatcgacaat gtggaccatg acattggaac ttgtgacaaa gtcaataatg ttcatctagc
     2161 cattcacaaa aagcctgata atctttctgc ttcttcaccc tcttcagcca tttccacaga
     2221 aacactttct ctaaagctca ctgaacagac acacattgtt accagcttta tcagtcctca
     2281 cagtggatta cacacaatta atggagaagg gcatgagaac ttagagagtt ctgccagtgt
     2341 taatgttggc ctcagaccta gatctcaaat cataccatca atgtctgtgt ccatatactc
     2401 cagttcaaca gaagttctga aagcgtgcag gagtctaggt aaaaatggtt tgtctaatgg
     2461 tcatattctc ttggatatat gcccacctcc aagaccacca acttcgccat atcctccttt
     2521 accaaaggag aagttgaatc cacccactcc tagtatttat ttggaaaata agcgagatgc
     2581 cttttttcct ccattacatc aattttgcat caatccaaaa aaccctgtta cagtaattcg
     2641 cggtcttgct ggagctctta agttagatct tggacttttc tctaccaaaa ctttggtaga
     2701 ggctaacaat gaacatatcg tagaagtgag gacccaattg ttacagccag cagatgaaaa
     2761 ctgggatccc tctggaacaa agaaaatctg gcgatatgaa aataaaagtt ctcatactac
     2821 aattgctaaa tatgcacagt accaggcctg ctccttccag gaatcattga gaatggggtc
     2881 cttgaccttg cagaacagag tatgttagat ggccactgag ttcaagggat ctgcctgtct
     2941 ttgtcttcct acactggaat tacaaattta tgactctaag gacattgata tattttatga
     3001 cagagtctct ttctctcatt gtgtatgtct ggtaggcata gaacttaaag agatcacatc
     3061 tctctttacc tcctgtgatg gtttgtatat ccttggacca gggagtggca ccatctgaag
     3121 gtgtggcctt gttggaatag ggtgatctgg ttggaatggg tgtgtcactg tgggtgtggg
     3181 tataagatcc tcaccctagt tgcctggaag tcagtcttcc actagcagcc tttggatgaa
     3241 gacatagaac tctgtgcttc tcctgtgcca cgtctgcctg gatactgcca tgctctcacc
     3301 ttgatgataa tggactgaaa ctctgaacct gtaagccagc cccaattaaa tgttgttttt
     3361 ataagacttg ccttggtcat ggtatctgtt cacagcagta aaaccctaac taagacacct
     3421 cccaaatgtt gggattagat atacacatta ccatggctag ctaaaacatt gacaaatatt
     3481 aaaaatatga atgaatatta tgaaaaaata aaatgtacaa ataagtggac attgataata
     3541 aatattataa taaaggcata aaattatttt taatagattc atacataaca taatctaaga
     3601 aaagagaggc tcatccattt acaggatgta tatagaacaa cagtagactg gagcagaaaa
     3661 gaaatttctc tccttaatat tgtagttagt tttgtccttt tcttgacccc catctctgga
     3721 gctgaggatc aaacccagag ctttgtgctt gcttggtaaa tgctctacca cggagaaact
     3781 ctaccactga gccaaatccc aagcaccagt aattacactg tagttaattc actaagcata
     3841 tagaacaaac tgaatgtttt gaaatgtaca aagaagaaat tgctatatgt acgtaataaa
     3901 ggcagaggaa caaaaatagt attttctcaa caccttaaat gaatgaatag tttgaaagat
     3961 gtatttcaga ttattttttt aaaatcatgg ttttgtaata caactatcga gttagataaa
     4021 actgtttatt ctaatggagg aaaaagaaaa gtactttatg ataaaacaag gcttgatgag
     4081 tttatgatca ctaagacaac tttacaaaga tactggaact aatttttcaa actgaagagc
     4141 agacaaattt atctgagagg ctatcaaagt taataaagaa ttctcaaaaa gaaaaaccaa
     4201 atggtatttt taatagttca aaccatccat agttatagaa gaaatataaa ttattttaac
     4261 cttattctga atgcctccaa tcaaaacaaa acaaaaaccc atataatatc aaatgtttgt
     4321 aaagaatcag aagaatggga aacccttgtt aatttttgct aggactgaaa acttgatcct
     4381 tatggaaatc aatgcagagg ttctgccaga aaagaaaaga ccaataacag ttgaaaacta
     4441 aaaagaattt ccctatgagc agcaatacca tttttgtcat ataagacaat attgaattag
     4501 agacatattt gtacacctac acttatcaca gcatcaaata agtagaatca gctaagatat
     4561 ctagtactgg taaatatata atgaaaatat tgtgtatatg aattttattt cactcttaag
     4621 aaaacaccct aactttagga aatgcccact aaaaaatgaa
//
