LOCUS       XM_011248582            5243 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus ubiquitously transcribed tetratricopeptide
            repeat containing, Y-linked (Uty), transcript variant X4, mRNA.
ACCESSION   XM_011248582
VERSION     XM_011248582.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000087.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011248582.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5243
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="Y"
     gene            1..5243
                     /gene="Uty"
                     /gene_synonym="Hydb; mKIAA4057"
                     /note="ubiquitously transcribed tetratricopeptide repeat
                     containing, Y-linked; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 mRNAs, 19 ESTs, 428
                     long SRA reads, 6 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     5 samples with support for all annotated introns"
                     /db_xref="GeneID:22290"
                     /db_xref="MGI:MGI:894810"
     CDS             142..3840
                     /gene="Uty"
                     /gene_synonym="Hydb; mKIAA4057"
                     /codon_start=1
                     /product="histone demethylase UTY isoform X4"
                     /protein_id="XP_011246884.1"
                     /db_xref="GeneID:22290"
                     /db_xref="MGI:MGI:894810"
                     /translation="MSSSCVHHLRGNEEKKMAAEKARGEGEEGSFSLTVEEKKALCGL
                     DSFFGFLTRCKDGAKMKTLLNKAIHFYESLIVKAEGKVESDFFCQLGHFNLLLEDYSK
                     ALSSYQRYYSLQTDYWKAFQNHFWWWKITREVWKLLLRKFRNAAFLYGLGLVYFYYNA
                     FQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKMNTDYESSLKHFQLALIDCNVCTLS
                     SVEIQFHIAHLYETQRKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLIGD
                     NTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASAD
                     TWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQPQDAIKCYLN
                     AARSKSCNNTSALTSRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQ
                     GAMNTAQQSVSDTWNSVQTASHHSVQQKVYTQCFTAQKLQSFGKDQQPPFQTGSTRYL
                     QAASTNDQNQNGNHTLPQNSKGDAQNHFLRIPTSEEQKIINFTKESKDSRSKSLTSKT
                     SRKDRDTSNICVNAKKHSNHIYQISSVPISSLNNKESVSPDLIIVDNPQLSVLVGETI
                     DNVDHDIGTCDKVNNVHLAIHKKPDNLSASSPSSAISTETLSLKLTEQTHIVTSFISP
                     HSGLHTINGEGHENLESSASVNVGLRPRSQIIPSMSVSIYSSSTEVLKACRSLGKNGL
                     SNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNP
                     VTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQLLQPADENWDPSGTKKIWRYE
                     NKSSHTTIAKYAQYQACSFQESLREENERRTQVKDYSDNESTCSDNSGRRQKAPFKTI
                     KCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPG
                     SRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLE
                     DLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERY
                     EWNKLQSVKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKHCQTLREALVAAG
                     KEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENF
                     VVLEQYKMEDLIQVYDQFTLAPSLSSAS"
ORIGIN      
        1 acggttgctt ccattggaaa gcctggcttt agggagaggt tatggacgtt acgtgcggtt
       61 cacactgacg gtattataac aactttatgc ggatgctagc gaagtttgat attctaagaa
      121 cttcgcttag gttctgcaac aatgagttct tcttgcgttc accatctgcg tggtaatgag
      181 gaaaagaaaa tggcggcgga aaaggctaga ggcgagggcg aagaggggtc cttcagtctc
      241 acagtcgaag agaagaaggc gctttgtgga ttagatagct tcttcgggtt cttgacccga
      301 tgcaaagatg gcgccaagat gaagacgctg ttgaacaagg caattcactt ctatgagtct
      361 ttaatagtaa aagctgaagg aaaagtggaa tcagatttct tttgtcaatt aggtcacttc
      421 aatctcttac tggaagatta ttcaaaagca ttgtcatctt accagagata ctacagttta
      481 cagactgact actggaaggc attccagaac cacttttggt ggtggaaaat taccagggaa
      541 gtttggaaat tattgctgag gaagttcagg aatgctgcct ttttatatgg tcttggtttg
      601 gtctatttct actacaatgc atttcagtgg gcaattagag cttttcagga agtcctttat
      661 gttgacccta atttttgcag agccaaagaa atccatttac gacttggttt tatgttcaaa
      721 atgaatacag attatgaatc tagtttaaag cattttcagc tggccctgat cgactgtaat
      781 gtctgtactt tgtccagtgt cgaaattcag tttcatattg ctcacttata tgaaacccag
      841 aggaaatacc attctgcaaa ggcagcctat gaacaacttt tacagattga aagcttgcca
      901 tcacaagtca aagcaactgt attgcaacag ttaggttgga tgcaccataa tatggatcta
      961 attggagaca ataccaccaa agagagatat gctattcagt atctccaaaa gtcattggag
     1021 gaagatccta attctggtca atcttggtat ttccttggaa ggtgttactc atgtattggg
     1081 aaggttcagg atgcctttgt atcttacagg caatccattg ataaatcaga agcaagtgca
     1141 gacacatggt gttcaatagg tgtgctgtat caacagcaaa atcaacctat ggatgccttg
     1201 caagcctata tatgtgctgt acagttggat catggacatg cagcagcctg gatggactta
     1261 ggtattcttt atgaatcttg caaccaaccc caggatgcca ttaaatgcta cttaaatgca
     1321 gctcggagca aatcttgtaa taacacctct gcacttacat caagaattaa gtttttacag
     1381 gctcagttgt gtaaccttcc acaaagtagt ctacagaata aaactaaatt acttcctagt
     1441 attgaggagg catggagcct accaataccc gcagagctta cctccaggca gggtgccatg
     1501 aacacagcac agcagagtgt ttctgatacc tggaatagtg tccagacagc ttcacatcat
     1561 tcagtacagc agaaagttta tacacagtgc ttcacagcac agaaattaca gagttttggt
     1621 aaagatcaac aacctccatt tcaaactggg tccacacgat atctccaagc agctagcact
     1681 aatgatcaga atcagaatgg aaatcatact ctgcctcaga attcaaaagg ggatgctcaa
     1741 aatcacttct tacgtattcc tacctcagaa gaacaaaaga tcattaactt taccaaagag
     1801 agcaaggatt caagaagtaa atccttgact tctaaaacaa gtaggaaaga tagagacaca
     1861 tctaatatct gtgttaatgc aaagaagcat tctaatcata tttatcagat ctcatcagtt
     1921 ccgatttcca gccttaataa taaagaatct gtgtcaccag atttaataat tgtagacaat
     1981 cctcagcttt ctgtcttagt tggagaaact atcgacaatg tggaccatga cattggaact
     2041 tgtgacaaag tcaataatgt tcatctagcc attcacaaaa agcctgataa tctttctgct
     2101 tcttcaccct cttcagccat ttccacagaa acactttctc taaagctcac tgaacagaca
     2161 cacattgtta ccagctttat cagtcctcac agtggattac acacaattaa tggagaaggg
     2221 catgagaact tagagagttc tgccagtgtt aatgttggcc tcagacctag atctcaaatc
     2281 ataccatcaa tgtctgtgtc catatactcc agttcaacag aagttctgaa agcgtgcagg
     2341 agtctaggta aaaatggttt gtctaatggt catattctct tggatatatg cccacctcca
     2401 agaccaccaa cttcgccata tcctccttta ccaaaggaga agttgaatcc acccactcct
     2461 agtatttatt tggaaaataa gcgagatgcc ttttttcctc cattacatca attttgcatc
     2521 aatccaaaaa accctgttac agtaattcgc ggtcttgctg gagctcttaa gttagatctt
     2581 ggacttttct ctaccaaaac tttggtagag gctaacaatg aacatatcgt agaagtgagg
     2641 acccaattgt tacagccagc agatgaaaac tgggatccct ctggaacaaa gaaaatctgg
     2701 cgatatgaaa ataaaagttc tcatactaca attgctaaat atgcacagta ccaggcctgc
     2761 tccttccagg aatcattgag agaagaaaat gaaagaagaa cacaagttaa agactattca
     2821 gataatgaat caacatgttc agataattct ggaaggagac agaaagcacc ctttaaaacc
     2881 ataaaatgtg ggattaacat tgatctgtct gataacaaaa agtggaagtt gcagttacat
     2941 gagctgacaa agcttcctgc ttttgtacgt gttgtatcag cagggaatct tctcagtcat
     3001 gttggctata ctatattggg gatgaattca gttcaactat gtatgaaagt tccagggagt
     3061 agaataccag gtcaccaaga aaataacaat ttctgttctg ttaacataaa tattggtcca
     3121 ggtgattgtg aatggtttgt tgtacctgaa gattattggg gtgttctgaa tgacttctgt
     3181 gaaaaaaata atttgaattt cctgatgagt tcttggtggc cgaaccttga agatctttat
     3241 gaagcaaatg ttcctgttta taggtttatt caacgacctg gtgatttggt ttggataaat
     3301 gcaggcactg ttcactgggt tcaggctatt gggtggtgta acaacatcac ctggaatgtt
     3361 ggtccactca cagccttcca atataaattg gcagttgaac gatatgaatg gaataaattg
     3421 caaagtgtca agtcagtagt acccatggtt catctttcat ggaatatggc acgaaatatc
     3481 aaagtctcag atccaaagct ttttgaaatg attaaatatt gtctcctcaa gattctaaag
     3541 cattgtcaga ctttgagaga agctcttgtt gcagcaggga aagaggtttt gtggcatggg
     3601 aggataaatg atgaaccagc tccttactgt agcatctgtg aggtggaagt ttttaattta
     3661 ctttttgtca ctaatgaaag caattctcaa aagacatata tagtacattg tcagaactgt
     3721 gcacgaaaaa caagtggaaa tttggaaaat tttgtagtgc tagaacaata caaaatggag
     3781 gacctgattc aagtctatga ccaatttaca ttagctcctt cgttatcttc tgcatcttaa
     3841 tattgttcca gaaatactga ggcgtttgtt cttcttgaaa tatactactt attttcttgt
     3901 tattctcata agactgctat ctcaaagcta aatttatgca acctttcaag agtagagaat
     3961 caggagacta aacagagcat tacttctatt ccaagattta caaagttgac ccaaatgtat
     4021 ttcataatta aaagttaata gtaatagtca catgatttgt atatatctgc cagaaataac
     4081 attttgacac aaacaaatac ctggaaaaca actttttata tctccatttc ctggatgaca
     4141 gatttcttta tgcttgtaag ttaccccaaa ttttttgttt agaatcaaat agtatcttat
     4201 ttggctactt ctttttaaga taactaacaa attgaaaaaa aattttttct tttaccaatt
     4261 ttttgctaaa gtcaaaataa tatgaaaaag gtttatattg ctctgtcact attgttttga
     4321 agtcttgatt tcatgtgatt acaaaataaa aatattaaca gactggtaaa aagattatag
     4381 gttgcatata aataatttca aagtgatggt tttttgtttt gttttgaatc ttgacacaaa
     4441 ctcaaactat tcataaatac atatatatat gtgtatatat gtatgtatac atatatgtac
     4501 atatatatat atatacacat acatacatat atacatatat atgtatattg ctggaaaatc
     4561 cttgtgaatt gaatgttatt tttttctaga tttacttgcc attaaatact aaggagttgt
     4621 ataattttaa atgccacaat taatttttat atgtgtaaat aaagctactt agtattgtac
     4681 ataaactctt attaaaatta tttagtgtat aaagaatttt tcaatgtttg agttttgaag
     4741 attatatagt tccaatcttt gttccttttc aaagttaatg aatatatgta tttaagtctg
     4801 ccaacacatg tatgtatgta gagatctcag tatttcactc aacaagaaaa tcacaatttt
     4861 tcaatttttt atggctgaaa gtttttgaag gtatttgctt acaaaatagg tatgcttatt
     4921 tttaaagacc atcagtgtct tttagtctga ttaggttaca ccttatgaaa tgacaagtag
     4981 ttgctgtcag aaatattttt taagggtaga aaataaaggt aaattaagat ttttttataa
     5041 gaaacataga tttgacaagt gcttatcatt tagagttttg ctttaatgga aaagttcatt
     5101 gcaatgatga tctctatttt agagtttaat attcctagga acttttaaaa cagataattt
     5161 tgaaattcca tgtattcctg cttgttcaat ctggtgtgtg ttgggagact tacgcattaa
     5221 aatttattat tagtaaatct taa
//
