LOCUS       XM_011250132            6043 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus ubiquitin specific petidase 45 (Usp45),
            transcript variant X1, mRNA.
ACCESSION   XM_011250132
VERSION     XM_011250132.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6043
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..6043
                     /gene="Usp45"
                     /gene_synonym="3110003C05Rik; 4930550B20Rik; Gcap7"
                     /note="ubiquitin specific petidase 45; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 mRNAs, 24 ESTs, 798 long SRA reads, 7 Proteins, and
                     98% coverage of the annotated genomic feature by RNAseq
                     alignments, including 5 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:77593"
                     /db_xref="MGI:MGI:101850"
     CDS             95..2536
                     /gene="Usp45"
                     /gene_synonym="3110003C05Rik; 4930550B20Rik; Gcap7"
                     /codon_start=1
                     /product="ubiquitin carboxyl-terminal hydrolase 45 isoform
                     X1"
                     /protein_id="XP_011248434.1"
                     /db_xref="GeneID:77593"
                     /db_xref="MGI:MGI:101850"
                     /translation="MRVKDPSKDLPEKGKRNKRPLLPHDEDSSDDIAVGLTCQHVSYA
                     VSVNHVKKAVAESLWSVCSECLKERRFCDGQPVLPADVWLCLKCGLQGCGKNSESQHS
                     LRHFKSSGTESHCVVISLSTWVIWCYECNEKLSTHCNKKVLAQIVDFLQKHAFKTQTG
                     AFSRIIKLCEEKREAGEIKKGKKGCTVPSVKGITNLGNTCFFNAVIQNLAQTYILFEL
                     MNEIKEDGTKFKISLSSAPQLEPLVVELSSPGPLTSALFLFLHSMKEAEKGPLSPKVL
                     FNQLCQKAPRFKGFQQQDSQELLHHLLDAVRTEETKRIQASILKAFNNPTTKTADDET
                     RKKVKAYGKEGVKMNFIDRIFIGELTSTVMCEECANISTMKDPFIDISLPIIEERVSK
                     PVLLGKMSKCRSLQETDQDHNKGTVTVGNAHQPRASRKHSSPNDKNQLSHDRKHLRKW
                     PSEEEKTVVTHPKNDNLEASPPASTLSTEASLNESLTDGSERDASLESSVDADSEASE
                     PEIASKQPVLLRSRGDSCGHAEQHPHLPLASELPQAKETHGGEEEMAEAIAELHLSGT
                     VTGNRDFHREKQPLNVPNNLCFSEGKHTRLHSAQNAFQTLSQSYVTTSKECSVQSCLY
                     QFTSMELLMGNNKLLCEDCTEKRRKCHKETSSAEKKAGGVYTNARKQLLISAVPAILI
                     LHLKRFHQAGLSLRKVNRHVDFPLTLDLAPFCAATCKNISVGEKVLYGLYGIVEHSGS
                     MRGGHYTAYVKVRVPSRKLSECITGRKTAAGLKEPDGELGGHWVHVSDTYVQVVPESR
                     ALSAQAYLLFYERIL"
ORIGIN      
        1 ctttcctcgg ctccttcctg ctcttcttcc tacaggcgct gtccaggctc ttgagcgccc
       61 cgcagccagc accggcagaa agagtaaata acagatgcgg gtaaaagatc catcaaaaga
      121 tctacctgaa aaaggcaaaa gaaataaaag accactgctg cctcatgatg aagattcttc
      181 cgatgacatt gctgtaggtc taacgtgcca gcacgtcagt tatgctgtca gtgtgaatca
      241 tgtgaagaaa gcagtagctg agagtctgtg gtcagtttgt tcagaatgtt tgaaagagag
      301 aagattctgc gatggacagc cagtactgcc tgctgatgtt tggttgtgcc tcaagtgtgg
      361 tttgcaggga tgcggtaaaa actcagaaag ccagcattca ctgagacact tcaagagctc
      421 tgggacagag tcccattgtg ttgtcatcag cctgagtaca tgggtcatat ggtgttatga
      481 atgcaatgaa aagttgtcga cacattgcaa caagaaagtt ttggctcaaa tagttgattt
      541 tctccagaaa catgctttta aaacacaaac aggtgcattt tctagaatca taaaactttg
      601 tgaagaaaaa cgtgaagcag gtgaaataaa gaaggggaag aaaggctgca ctgtgccatc
      661 tgtcaaagga attacaaact tagggaatac ttgctttttt aatgcagtca ttcagaactt
      721 ggctcagact tacattcttt ttgaactgat gaacgagata aaagaagatg gcaccaaatt
      781 caagatttct ctttcgtcag ctccacagct ggagccgtta gtggtggaac tctcgagccc
      841 aggaccactg acgtcagcct tgttcctgtt tcttcacagc atgaaggagg ctgaaaaagg
      901 accactttct cctaaagttc ttttcaatca gctttgtcag aaggctcctc ggtttaaagg
      961 tttccagcaa caggacagcc aggagcttct gcaccatctg ttggatgcag tgaggacaga
     1021 ggagaccaag aggatacaag ccagcattct aaaagccttc aacaacccaa ctaccaagac
     1081 tgctgatgat gaaactagaa aaaaggtcaa agcctatgga aaggaaggtg tgaagatgaa
     1141 cttcatagat cgcatcttta ttggcgaatt aactagcaca gtcatgtgtg aagaatgtgc
     1201 gaacatctct accatgaagg atcccttcat tgatatctca cttcctatca tagaagaaag
     1261 ggtttcaaaa cctgtacttt tggggaaaat gagtaaatgc agaagtttac aagaaacaga
     1321 ccaagatcat aacaagggca ccgtgactgt aggaaatgcc catcaaccca gagcttccag
     1381 gaagcactcc tcacctaacg acaagaacca actaagtcat gacagaaaac atttaagaaa
     1441 atggccatct gaagaagaga aaactgttgt tacacaccca aagaatgaca acttggaagc
     1501 cagcccgcct gccagcaccc tcagcactga ggcgtccctg aacgagagcc tcactgacgg
     1561 cagcgagagg gacgccagcc tagagagcag cgtggatgcc gacagcgagg cttcggagcc
     1621 cgagatcgct tccaagcagc ctgtgctgct gcggtccagg ggtgattcct gcggacacgc
     1681 ggagcagcac ccacacctcc cactggcaag tgaattgcca caagccaagg agacgcatgg
     1741 tggcgaggag gaaatggcgg aagcgattgc tgaacttcat ttgagtggca ctgtaactgg
     1801 caatagagat ttccacaggg aaaaacagcc actaaatgtc ccaaataatt tgtgtttttc
     1861 agagggaaaa catacgaggc ttcacagtgc ccaaaatgct tttcagaccc tttctcagag
     1921 ttatgtaact acttctaaag aatgctcagt ccagtcctgt ctctaccagt tcacatccat
     1981 ggagttatta atgggcaaca ataagctgct ctgtgaggac tgtactgaaa agagacggaa
     2041 gtgccacaaa gaaaccagct ccgcagaaaa gaaagcagga ggagtttata ccaatgccag
     2101 gaagcaactc ctcatatctg ccgttcctgc tatcctaatc cttcatctta aaagattcca
     2161 ccaggctggc ttgagtcttc gtaaagtaaa cagacatgta gactttccgc ttacccttga
     2221 cttggcaccg ttctgtgcgg ctacctgtaa gaatataagt gtgggggaga aggttctcta
     2281 cggtctctac ggtatagtgg agcacagcgg ctccatgaga ggaggccact acactgctta
     2341 cgtgaaagtg agagtaccct ccaggaagct gtccgagtgc atcaccggga ggaagactgc
     2401 agccggtttg aaagaacctg atggtgaatt gggaggccac tgggtccatg tcagcgacac
     2461 ctatgtgcag gtggttccag agtcaagagc cctgagtgca caagcttatc ttctttttta
     2521 tgaaagaata ttataatatc tgttcattgt tatttagttc atttttattt taatgctgaa
     2581 gtcgtaacca taatatgtaa tgtgccttct tagtctttag gaatagtgca tccttccagc
     2641 gttatttaac tctttcaaca tgtggtgaat cctttaaaaa aaaattaatt aatttgacag
     2701 gcagttgtgc atgcctttaa ttccagcact tgggaggcag aggcagacag atctctgttt
     2761 gaggccaact agggctattc aataaaacct tgtcttgaaa tattaaacaa aaagttaatt
     2821 aatgctttca aatctatatt cttttttttt cttttttttt gcttttgtga gacagggttt
     2881 ctctgtgtag ccctggctgt cctggaactc actttgtatc actttgtaga ccaggctggc
     2941 ctcgaactca gaaatccacc tacctctgcc tcccaagtgc tggcattaaa ggcgtgcgcc
     3001 accactgcct ggctcaaatc tatattttta aatgtaaaaa catgttttat gttaattttc
     3061 atgtccatgg aaattgcccc tacacacaca cacacagagt tgatagtaaa gcaaccccct
     3121 ctatgatatg actcatcctt acatgcattc aaagatgatg ctaaattgga tctttagtat
     3181 actatttcct aatgtaatac aaccttcctg agtggatcca atatatctta tgctacaatt
     3241 tgcttacttt ttgttgaagc cttttttaag cttggctgtt ttgaatcata cttcacattt
     3301 ttatgtgcta gttatttttc tagtaaacat tgatgtgagt ttataactat gaaaggaaaa
     3361 tcatacatcc ttgcaccacc ccactttaaa tcatctcagg gctctgcagt ggtgtgtgtg
     3421 ttagtctata ggaaaagttt ctagaacagt ctgaactagt gcctaatgta acataattaa
     3481 tttttcatat tttatgtgag tcagtagtat aaaaaggagc cattgtaatt ttggtagtgt
     3541 gagtttacaa gtaatgaatt gattcgctta ttgctttgaa tatttgaagg tattgaaaca
     3601 tttcataaac taatcatttg cagtctttga aagataattt acaacacata aaactggtaa
     3661 atagaagtta tagtctatat aggaatatag aatactttaa agtttaagga tatctttgaa
     3721 ctgtaaacca ccaaattata tttataaatg gtagagatca tattcttata accaacaatg
     3781 aatatataat acttttttac ttctatacat taatacatgt taagcatagt tttgtcttca
     3841 taagcattta tttaaaactt caggtggata gttagggttg tagttcaatg gcaaagcact
     3901 tgcctggttc catccctagc aaaacaaaga aaatattcag gtgggcttgg ctactttcat
     3961 gggacacaga cttgccactt ctgttcccct taaataagca gtaacacaga atagtttctt
     4021 ctagcattca aaggattgaa ctgtgaaaac ttagcatgaa aaatattact accaagattt
     4081 tcaataatca atgaagtggc tcactgatac atagtattga atcaagatgt aagggaacag
     4141 gttcaatgtc ttagtcatca gtgcctgtgt ttgattctat gggcaaatgt gagggagaga
     4201 ggctgtaaac tgtccagacc tttagccagg atggaacctt cttaacatgt gtaacataaa
     4261 gtccccagtg ttgcctcttg atatgtggct gggtgaaact gattgtctaa tggagacatt
     4321 ttaagattgt ggagaaattt tcaatggtat ttgaattttt ttaattgaag gtgaagaaat
     4381 atattttatc tgtagagccc agttgtgtcc tctaaaaaga actttccagt gtcttctgtt
     4441 tcatcagaca ttcagtgtta ttaatctatt gacacggaag agtctagcac cagagcaatg
     4501 aatgagaaaa ataatttatt tgttcaagct agcctgtcat agcagttgca cccacacccc
     4561 caaacaaatg caagcggtca gcctttttcc cccctctctc ctggaaaaga tactattaag
     4621 acatgtacaa tctaagcagg ttccaatacc gggcatatga tagtatttta tgagccttta
     4681 aaacagaaaa acctgctgag tgatggtggc ccatgccttt agattcagca cttgggaggc
     4741 agaggcaggt ggatttgagt tcaaggacac cctggtccac agagcaggtt ccaggaaagc
     4801 caagacaaca cagagaaacc ttgcctgaaa aaccttgggg aaaaaaaaaa caccctaaaa
     4861 tctatatgat tttatacatt attctagtag tgatgtacaa ataaaatgtt catttattac
     4921 ctagttctga ggagattctg gaatgtattt ttttttaatg acctaaagtt tgagtgtttt
     4981 tcttgtcacc tgaaaatgta ggaaaatggt ttgatttgat atctaggaat ttcttatcaa
     5041 gcttatgtaa tatagaaaaa tcacccagat ctacacttaa atttttgttc ttactttgaa
     5101 gttttccaaa gcacatttgt agaaatttta aattgtgagg ccactgtact aacagattac
     5161 ctcaggaaac cgtgcaaaca aacaagaatg tttacagatc cgcacaacta gtcagtgctt
     5221 tggcaccgtg aatttgaaag gtaaaagaga gaagttttta tctagaaact ggtttacagg
     5281 gtacctctag ccccagttct cccctgactt tcccatattt aaaataataa aattctgatg
     5341 atgtgccaat tatgtgaatg cttgtgacat aaacaaatat acatctgtat ttaagatttg
     5401 ttgtttaatg ttttaaaaaa taatatgaag actgcttatg taggtggtca aggggatgat
     5461 catatatcaa cagagctatt ttaccatagt tcttagcttg catgtgtgat taattagtga
     5521 tttttatgta atacttgaat aagatatcct gaagatatga aatgtcttcg tgaaatgtag
     5581 ctgtgaaatg tcaccgcaca tcaaattttt atagtacaaa ataacatcct gcctactttc
     5641 atgaacttta tactcagctt atttttctgc atgacatctg gtcatataaa cctaaaccaa
     5701 atatgtgcga taaaatcaag ctttcagcta gcatccattg cagtattaga gaaatgattt
     5761 ctgcattaaa atgtttttgt tcatgcagaa atcatcaatt gaaatgtgtt taaaagatga
     5821 ttatttttag gtatcagtaa tacattcatg gtatcattcc ttctctttca tccagtttta
     5881 cagtatttta aaaatatctg tgtaacttat tgagcattat ttgatcattg ctgtatgtaa
     5941 aagatcacaa taaatattag attcttatgt taattgatta ggcctagagt ttttgcatta
     6001 tacattgtta gcagaatgtt aataaacatt gtgtcattgc cta
//
