LOCUS       NM_026615               2143 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus ubiquitin related modifier 1 (Urm1), mRNA.
ACCESSION   NM_026615
VERSION     NM_026615.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Zhang,X. and Chen,X.L.
  TITLE     The emerging roles of ubiquitin-like protein Urm1 in eukaryotes
  JOURNAL   Cell Signal 81, 109946 (2021)
   PUBMED   33548388
  REMARK    GeneRIF: The emerging roles of ubiquitin-like protein Urm1 in
            eukaryotes.
            Review article
REFERENCE   3  (bases 1 to 2143)
  AUTHORS   Zou,J., Ma,W., Li,J., Littlejohn,R., Zhou,H., Kim,I.M.,
            Fulton,D.J.R., Chen,W., Weintraub,N.L., Zhou,J. and Su,H.
  TITLE     Neddylation mediates ventricular chamber maturation through
            repression of Hippo signaling
  JOURNAL   Proc Natl Acad Sci U S A 115 (17), E4101-E4110 (2018)
   PUBMED   29632206
REFERENCE   4  (bases 1 to 2143)
  AUTHORS   Singh,S., Tonelli,M., Tyler,R.C., Bahrami,A., Lee,M.S. and
            Markley,J.L.
  TITLE     Three-dimensional structure of the AAH26994.1 protein from Mus
            musculus, a putative eukaryotic Urm1
  JOURNAL   Protein Sci 14 (8), 2095-2102 (2005)
   PUBMED   16046629
  REMARK    GeneRIF: Structural model of the Urm1 protein reveals a secondary
            structure fold similar to MoaD proteins and ubiquitin.
REFERENCE   5  (bases 1 to 2143)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AL928926.9.
            
            On Apr 30, 2007 this sequence version replaced NM_026615.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK049849.1, AK049227.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-47                AL928926.9         5858-5904
            48-118              AL928926.9         11161-11231
            119-200             AL928926.9         19871-19952
            201-249             AL928926.9         21190-21238
            250-2143            AL928926.9         21572-23465
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 20.67 cM"
     gene            1..2143
                     /gene="Urm1"
                     /gene_synonym="2900073H19Rik"
                     /note="ubiquitin related modifier 1"
                     /db_xref="GeneID:68205"
                     /db_xref="MGI:MGI:1915455"
     exon            1..47
                     /gene="Urm1"
                     /gene_synonym="2900073H19Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             13..318
                     /gene="Urm1"
                     /gene_synonym="2900073H19Rik"
                     /note="ubiquitin-related modifier 1 homolog"
                     /codon_start=1
                     /product="ubiquitin-related modifier 1"
                     /protein_id="NP_080891.1"
                     /db_xref="CCDS:CCDS15859.1"
                     /db_xref="GeneID:68205"
                     /db_xref="MGI:MGI:1915455"
                     /translation="MAAPLCVKVEFGGGAELLFDGVKKHQVALPGQEEPWDIRNLLVW
                     IKKNLLKERPELFIQGDSVRPGILVLINDADWELLGELDYQLQDQDSILFISTLHGG"
     exon            48..118
                     /gene="Urm1"
                     /gene_synonym="2900073H19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            119..200
                     /gene="Urm1"
                     /gene_synonym="2900073H19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            201..249
                     /gene="Urm1"
                     /gene_synonym="2900073H19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            250..2143
                     /gene="Urm1"
                     /gene_synonym="2900073H19Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1191..1196
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Urm1"
                     /gene_synonym="2900073H19Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1209
                     /gene="Urm1"
                     /gene_synonym="2900073H19Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggtttcctaa acatggcggc gcccttatgt gtgaaggtgg agttcggagg tggtgcagag
       61 ctcctgtttg atggggtaaa aaagcatcaa gtcgccttgc ctgggcagga ggaaccctgg
      121 gatatacgga acctccttgt ctggatcaag aagaatttgc taaaagagcg accagagctg
      181 ttcatccagg gagacagtgt gcggccagga atcctggtgc tgattaatga tgccgactgg
      241 gaactgctgg gggagctgga ctaccagctg caggaccaag acagcatcct cttcatctcc
      301 acactgcacg gcggctgagg cctccccagt gggcccaagc acctttgcag gggaacacag
      361 gacaaccaca gcactcctcg atctgcttcc aggtcctcag tcccccttgg ctgcctcctt
      421 ccctgctgta cccctgagct tcctctaggc agggaaaaga ggccaggtgc taaaaatgag
      481 cctttctggg caaggcacgt gagcagggag agcgaagaga gagagcagcc gcctgagtcc
      541 agcactcctc ccagcagctg aggtggggga gggtgttcct gtgctgtgtc aggagtagag
      601 ggggctctgt gcccaggtga cccagctgct tgccactcat gtgtcttggt gtatctaagc
      661 actgagtggt tgcctggaag gcactccagt tcctgagaca tcttcatggg gaagatagat
      721 gggctggagt aactgatgag aaactcctcc cttgccaaag attagaaggg cctccgcctc
      781 agtttcccca tctggacaca gagagctctg cttgtccccc actgatgtca ttatggaacc
      841 ccagctgggg tcccctattc agtgctcccc tccctcctcc acccagcagc tgctctcccc
      901 cccaccccct tctccatcct ttgaccctgg ctggcctccc ccccacatag gccaccagat
      961 gggctcctga gatactctcc aggctgccta caactcattc tgttgcgggt agagaatgga
     1021 agggagcagc ctaaccgtag gcagaggggg cggggcctca gcatgtgtaa ctccaggctt
     1081 cctgaaacaa gtgggatttg ggtgtgcagc acctagtggg cagaaggctg tgtgtgtccc
     1141 tttcctctat cttctggaga cttcatgcct gcagcagctg gcctcgggca aataaaaaga
     1201 ctaagtgact aggttgttta ctagccttgc ttcaccctta aaactggtgg gccctgtact
     1261 ctctgggtct gtgggttcta atacaaatgc cctgttctga gccaagggtt cagagatggc
     1321 cttcacctga aaggtaaaaa catgaactgt tccaaagaga gggtggatga gtaggacggt
     1381 gtggatggga agggagtgta agcccgtgat gaccagccca cattctaagc caggatttct
     1441 caccaaccag tccaagctag gctttgttct gccaactgca gtcaccagtc ccagaagggg
     1501 tggcctaagt aagcctgctg agtctcatta cttccacaac ctgcagaaaa agctttatct
     1561 gacccaaaat gttgcttttc actacatggc aatgaggtgg actcctttac cttgcataga
     1621 tgagagtgtt tgatactgtg ggccagtgat gggggtggag aagagcagac tctcaaggag
     1681 agcattctct gacgtctgct tggtgagctg ttcccagcca ctgccccaca acagaccctt
     1741 gggcttgtgt gcatagtagc agccagtgtt gggtccaagt gcagctgagg gtgtgctgag
     1801 gtcaagcctc atcatagttt tctcactgtg acatttttag agggtcagcc tgtcctggtt
     1861 ccaaggcttc agctaccaga cataagcact aggatgcctt ctagctgatg ggtgggaggg
     1921 tgtgggtagg gacctcttgc ttttatggca ccccagttaa tgctgagcat ttaggaggat
     1981 gggctgagga aaccagcttt ccccatgtgg tgccactgcc cattcactct ggtcctctaa
     2041 cagaaagggg tcagagacag gtgactcact aagctccaac agccccctcc catgcacctc
     2101 gtggcccttg tttttgagga aataaacaag tcccactacc tcc
//
