LOCUS       NM_001308464            1208 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Mus musculus ubiquinol-cytochrome c reductase complex assembly
            factor 5 (Uqcc5), transcript variant 1, mRNA.
ACCESSION   NM_001308464
VERSION     NM_001308464.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Liang,C., Zhang,S., Robinson,D., Ploeg,M.V., Wilson,R., Nah,J.,
            Taylor,D., Beh,S., Lim,R., Sun,L., Muoio,D.M., Stroud,D.A. and
            Ho,L.
  TITLE     Mitochondrial microproteins link metabolic cues to respiratory
            chain biogenesis
  JOURNAL   Cell Rep 40 (7), 111204 (2022)
   PUBMED   35977508
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC154446.2.
            
            On Jan 4, 2022 this sequence version replaced NM_001308464.1.
            
            Transcript Variant: This variant (1) encodes the longest isoform
            (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK036279.1, FO721289.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-305               AC154446.2         93426-93730         c
            306-1208            AC154446.2         52917-53819         c
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14"
     gene            1..1208
                     /gene="Uqcc5"
                     /gene_synonym="2010107H07Rik; Gm41122; Smim4"
                     /note="ubiquinol-cytochrome c reductase complex assembly
                     factor 5"
                     /db_xref="GeneID:66487"
                     /db_xref="MGI:MGI:1913737"
     exon            1..305
                     /gene="Uqcc5"
                     /gene_synonym="2010107H07Rik; Gm41122; Smim4"
                     /inference="alignment:Splign:2.1.0"
     CDS             155..463
                     /gene="Uqcc5"
                     /gene_synonym="2010107H07Rik; Gm41122; Smim4"
                     /note="isoform 1 is encoded by transcript variant 1; small
                     nucleolar RNA host gene 8; small integral membrane protein
                     4"
                     /codon_start=1
                     /product="ubiquinol-cytochrome c reductase complex
                     assembly factor 5 isoform 1"
                     /protein_id="NP_001295393.1"
                     /db_xref="CCDS:CCDS84104.1"
                     /db_xref="GeneID:66487"
                     /db_xref="MGI:MGI:1913737"
                     /translation="MFSRAQVRRALQRVPGKQRFGIYRFLPFFFVLGGAMEWIMIKVR
                     VGQETFCFLPEMFKMKTTKHLSLDLANIPSKQRITDLCARSSTKVLSRCDVVLSYLST
                     "
     exon            306..1208
                     /gene="Uqcc5"
                     /gene_synonym="2010107H07Rik; Gm41122; Smim4"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1183..1188
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Uqcc5"
                     /gene_synonym="2010107H07Rik; Gm41122; Smim4"
                     /note="hexamer: AATAAA"
     polyA_site      1208
                     /gene="Uqcc5"
                     /gene_synonym="2010107H07Rik; Gm41122; Smim4"
                     /note="major polyA site"
ORIGIN      
        1 aactcttgcg gccgggctgt ggcgctgcag tcgagtcttg gtgctcagtc cacgggactc
       61 cgcggacacg caggggtccg cagggttatt tgtactgcct ccgggaacac cagtctgcct
      121 ggttccgtcc ctaccccact gggaggcctc ggtcatgttc tccagggccc aggtgaggcg
      181 agctcttcag cgagtgcccg gcaagcagcg attcggcatc tacagattcc tgcccttctt
      241 ttttgtcctg ggaggtgcga tggagtggat catgattaaa gtgcgcgtgg gccaggagac
      301 cttctgtttt cttcctgaga tgttcaagat gaaaacaact aaacatttgt cattggattt
      361 ggcaaacatt ccttcaaaac agaggatcac agatctttgt gcaagatcca gcactaaagt
      421 actttcccgt tgcgatgttg tactgtccta tttatcaact taaaatcagt attattgtcc
      481 cacatttgca gggttctaga catagagcaa cattttcatt tcagtgaata ataactccaa
      541 tcttccagtt tcctaactac tcacaggagt gagtcatcct tgaaagctct accctggaac
      601 tccacattgt atttactaag actgctgtta gcctgccctc ctgaatacta ctgtttgtaa
      661 ttagtcacac taaagaggcc atcattcttg cttggcttat cacaatagcc ttctagcaga
      721 tctccttgct tctactcttg gcccctttac agtctcatct caataaggag aaagcagagc
      781 aaccctatta aaccagaagt caaatgttac ttctctgctt gaaacaataa caaagacact
      841 ttttgtaact ctgtaatagt tcaagggctc acatggtttc tgaaacctta catgatctgc
      901 ccattacccc atctaccacc ttttataggg ctcactatgc tgataagtga attacaggtt
      961 aagagtgatg tacttatctc tcaggccttt attctggtta ttaattctgc ctggaatgct
     1021 ttccctgata gtcacaattc ttacatttct tcacagtaac ccaactgcca cattctttgt
     1081 gaaatctatt caaaccattc tctctgttct gagcacctca caatttcaac agtatgtatc
     1141 atgtttggta cacacatctg aatattatat gtaccccatt tgaataaagc tctactgaag
     1201 taaaatta
//
