LOCUS       NM_199252               2666 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus unc-93 homolog A (Unc93a), mRNA.
ACCESSION   NM_199252 XM_354978
VERSION     NM_199252.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2666)
  AUTHORS   Trachtulec,Z. and Forejt,J.
  TITLE     Synteny of orthologous genes conserved in mammals, snake, fly,
            nematode, and fission yeast
  JOURNAL   Mamm Genome 12 (3), 227-231 (2001)
   PUBMED   11252172
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AJ422143.1 and AC166360.4.
            
            On Apr 10, 2010 this sequence version replaced NM_199252.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ422143.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2322              AJ422143.1         1-2322
            2323-2329           AC166360.4         123804-123810
            2330-2666           AJ422143.1         2329-2665
FEATURES             Location/Qualifiers
     source          1..2666
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 8.78 cM"
     gene            1..2666
                     /gene="Unc93a"
                     /gene_synonym="unc-93A; Unc93l"
                     /note="unc-93 homolog A"
                     /db_xref="GeneID:381058"
                     /db_xref="MGI:MGI:1933250"
     exon            1..183
                     /gene="Unc93a"
                     /gene_synonym="unc-93A; Unc93l"
                     /inference="alignment:Splign:2.1.0"
     exon            184..237
                     /gene="Unc93a"
                     /gene_synonym="unc-93A; Unc93l"
                     /inference="alignment:Splign:2.1.0"
     exon            238..382
                     /gene="Unc93a"
                     /gene_synonym="unc-93A; Unc93l"
                     /inference="alignment:Splign:2.1.0"
     CDS             296..1672
                     /gene="Unc93a"
                     /gene_synonym="unc-93A; Unc93l"
                     /note="unc93 homolog A"
                     /codon_start=1
                     /product="protein unc-93 homolog A"
                     /protein_id="NP_954860.1"
                     /db_xref="CCDS:CCDS28402.1"
                     /db_xref="GeneID:381058"
                     /db_xref="MGI:MGI:1933250"
                     /translation="MERSLKNVLVVSCGFLLLFTAYGGLQNLQSSLYSEQGLGVATLS
                     TLYASVLLSSMFLPPILIKKCGCKWTIVGSMCCYVVFSLGNFHANWYTLIPTSILLGL
                     GAAPLWSAQGTYLTTMGNLQAEKVGKLGKDVVNQYFGIFFLVFQSSGVWGNLISSLVF
                     GKMSMQEAIPEEQLMSCGAKDCLMGPAATNSTHHPSQQLIYTLLGIYTGCGVLAILLV
                     AVFLESLEDKLENEGERRPRPPPLWSTLLSTFMLFRDKRLCLLMFLPLYSGFQQEFLS
                     GEYTKSYVTCALGIHFVGYVMICFSAMTALCSLLYGKISKYTGRAALYALGAAIHFSC
                     IVVFLLWHPNTNQLPVFFVLSGLWGMSDAVWQTQNNALFGVLFEENKEPAFANYRLGE
                     AIGFVIAFGYSSFLCVSTKLYILLGVLSLAMVGYGTVEYLEVKAASKVLGAEKKNQAE
                     EEEMKTKI"
     exon            383..564
                     /gene="Unc93a"
                     /gene_synonym="unc-93A; Unc93l"
                     /inference="alignment:Splign:2.1.0"
     exon            565..794
                     /gene="Unc93a"
                     /gene_synonym="unc-93A; Unc93l"
                     /inference="alignment:Splign:2.1.0"
     exon            795..920
                     /gene="Unc93a"
                     /gene_synonym="unc-93A; Unc93l"
                     /inference="alignment:Splign:2.1.0"
     exon            921..1138
                     /gene="Unc93a"
                     /gene_synonym="unc-93A; Unc93l"
                     /inference="alignment:Splign:2.1.0"
     exon            1139..1274
                     /gene="Unc93a"
                     /gene_synonym="unc-93A; Unc93l"
                     /inference="alignment:Splign:2.1.0"
     exon            1275..1406
                     /gene="Unc93a"
                     /gene_synonym="unc-93A; Unc93l"
                     /inference="alignment:Splign:2.1.0"
     exon            1407..2643
                     /gene="Unc93a"
                     /gene_synonym="unc-93A; Unc93l"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2618..2623
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Unc93a"
                     /gene_synonym="unc-93A; Unc93l"
                     /note="hexamer: AATAAA"
     polyA_site      2643
                     /gene="Unc93a"
                     /gene_synonym="unc-93A; Unc93l"
                     /note="major polyA site"
ORIGIN      
        1 gctctcaatg cacagcctca gcctgacttc ttcctcagct gagttcagtg tccagcctga
       61 cttttttcct ccgctgagtg gatgctcgcc tccttgtgct gtctcggcca tctcagcctt
      121 gcgaatctgc taggcagtac gacgaaaagg gacagagcaa atgggatggg caggtatggc
      181 caggacagaa gaacattcca tgttctgcac cactggcaac ttctctggac atatgaggga
      241 gctggacggg taccctcttt ctgacatcca ctggtactga caatctgtct gcataatgga
      301 gaggagtctg aagaatgttc tggtggtttc ttgtggcttc ctcctgctct tcactgccta
      361 cgggggcctg cagaatctgc agagcagcct ctacagtgag cagggcctgg gggtggcgac
      421 actcagcaca ctctatgcct ctgtgctgct gtcctccatg ttcctcccac ctatcctcat
      481 caagaagtgt ggctgcaagt ggaccatcgt gggctccatg tgctgctatg tggtcttctc
      541 cctgggcaac ttccatgcca actggtacac cctgatccct acctccatct tgctgggcct
      601 gggtgcggcc cctctgtggt cggctcaggg tacctacctc accaccatgg gaaatctgca
      661 agcggaaaag gtggggaagc ttggcaaaga tgtggtgaac cagtattttg gcatcttttt
      721 cctggtattc caatcttctg gagtgtgggg caacctgatt tcctcactgg tgttcggcaa
      781 gatgtccatg caagaagcca tcccagagga acagctcatg tcctgtggag ccaaagactg
      841 cctgatgggt ccagcggcca ccaacagtac tcatcacccc tcacagcagc tgatctacac
      901 actgctgggc atctacaccg gctgtggtgt cctggccatc ctgctggtag ctgtgtttct
      961 ggagtccttg gaagataagc ttgagaatga aggagagagg aggcccagac caccacctct
     1021 ttggtccaca ttactgtcaa ccttcatgct gtttagagac aagcgtttgt gtctcctgat
     1081 gttcctgcca ctgtacagtg ggtttcaaca agagttcctc tctggagagt acacaaagtc
     1141 ttatgtgacc tgtgccctgg gtatccactt tgtgggctac gtgatgatct gcttctcagc
     1201 catgactgca ctgtgctccc tgctgtatgg gaagatctcc aagtacacgg gcagggcggc
     1261 gctctatgca ctgggagcag ccattcactt ctcttgcatt gtggtcttcc tgctgtggca
     1321 cccaaacacc aaccaactgc ctgtcttctt cgtcctctct ggcctgtggg gaatgtctga
     1381 cgctgtctgg cagacacaga acaatgctct tttcggtgtc ctgtttgagg agaacaaaga
     1441 acctgctttt gccaactacc gccttggaga agccataggg tttgtcattg cctttggcta
     1501 cagctcattt ctgtgtgtga gtaccaagct ctacatcctc ttgggtgtct tgagtctggc
     1561 catggttggt tacgggacag ttgagtacct ggaagtcaag gctgcttcca aggtccttgg
     1621 tgcagaaaag aaaaaccagg cagaagagga agaaatgaaa acaaaaatat aaatgtggac
     1681 aagtgatggc tgagaaccca gcctgggtca gcagaggcgg tccacgtagc agcgctcagg
     1741 cgatagactc gaccctccac aactgtttcg tcaatatgtg gacattctaa agatcatcta
     1801 tagttttttt tttcctgtat tttcctcgat ttaacaaatt tctagttttc tactcatgga
     1861 gatcaaaagg atatgcaaag ggctgtcatt atagtccagt gctattgtgc atccttagca
     1921 aacacaaggc cacacgatca gcccacaaag gaagccgtag ctaggtacta gggtggagga
     1981 agtggctctg tcattaaagc actttctagg ctgagcacga ggaccccagt ttgaaccctc
     2041 aacccatgtt tttttgttgt tttctgtttt gttttgtttt gttgttttgt tttgttttgt
     2101 tttgttttgt tttgttttgt tttgttttgt tttaaatcag ggaaaggtaa tgtgcatgta
     2161 taattcctgt actggggagg cagaggcaga ggcagaaaga tccgtggagc cattggctag
     2221 tagccaggag ggccaggacc atgagctccg ggttcagtcc cgagatcttg gtcccaagaa
     2281 ctaaggttag tagcaaccaa ggacacataa tgtctacctc ctacacagac acacacacac
     2341 acacacacac acacacacac accactacac atggaagtat ctactaattt aatggtaaat
     2401 atgaatgcaa tctcaaaaat ttccagaata tgtttacctt agctttttgt tgtgcttaat
     2461 aattggaaga accatcatat tataaaatat aaacaccata attgtacaaa tgggtgaata
     2521 cctaatatca caaattttac aaacgggtac aggaagtcac ctgaacaaag acactgggca
     2581 gttttgggcc tcttaaaagt tcccggggga ttttctaaat aaacagtgaa attgttttat
     2641 ggaaaaaaaa aaaaaaaaaa aaaaaa
//
