LOCUS       NM_027895               2826 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus unc-51-like kinase 3 (Ulk3), mRNA.
ACCESSION   NM_027895 XM_620754 XM_925013
VERSION     NM_027895.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2826)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2826)
  AUTHORS   Mohammed,Y., Michaud,S.A., Petrosova,H., Yang,J., Ganguly,M.,
            Schibli,D., Flenniken,A.M., Nutter,L.M.J., Adissu,H.A.,
            Lloyd,K.C.K., McKerlie,C. and Borchers,C.H.
  TITLE     Proteotyping of knockout mouse strains reveals sex- and
            strain-specific signatures in blood plasma
  JOURNAL   NPJ Syst Biol Appl 7 (1), 25 (2021)
   PUBMED   34050187
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2826)
  AUTHORS   Wang,B., Iyengar,R., Li-Harms,X., Joo,J.H., Wright,C., Lavado,A.,
            Horner,L., Yang,M., Guan,J.L., Frase,S., Green,D.R., Cao,X. and
            Kundu,M.
  TITLE     The autophagy-inducing kinases, ULK1 and ULK2, regulate axon
            guidance in the developing mouse forebrain via a noncanonical
            pathway
  JOURNAL   Autophagy 14 (5), 796-811 (2018)
   PUBMED   29099309
REFERENCE   4  (bases 1 to 2826)
  AUTHORS   Maloverjan,A., Piirsoo,M., Kasak,L., Peil,L., Osterlund,T. and
            Kogerman,P.
  TITLE     Dual function of UNC-51-like kinase 3 (Ulk3) in the Sonic hedgehog
            signaling pathway
  JOURNAL   J Biol Chem 285 (39), 30079-30090 (2010)
   PUBMED   20643644
  REMARK    GeneRIF: Dual function of UNC-51-like kinase 3 (Ulk3) in the Sonic
            hedgehog signaling pathway.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ169382.1, BC151153.1, CK023112.1 and AC122528.3.
            
            On or before Jul 1, 2009 this sequence version replaced
            XM_925013.2, XM_620754.3.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK154642.1, BC151153.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-74                CJ169382.1         2-75
            75-1815             BC151153.1         1-1741
            1816-2338           CK023112.1         178-700
            2339-2826           AC122528.3         73886-74373         c
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 31.09 cM"
     gene            1..2826
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /note="unc-51-like kinase 3"
                     /db_xref="GeneID:71742"
                     /db_xref="MGI:MGI:1918992"
     exon            1..235
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            236..376
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            377..497
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            498..602
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            603..746
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            747..829
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            830..985
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            986..1091
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1092..1132
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1133..1235
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1236..1300
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1301..1379
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1380..1420
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1421..1468
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1469..1535
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1536..2826
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2805..2810
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      2822
                     /gene="Ulk3"
                     /gene_synonym="1200015E14Rik"
                     /note="major polyA site"
ORIGIN      
        1 gtcgagccgc gcttccggcg ggcagcgccg gggccctgcg gagtcccgcc tcgccgcccc
       61 tcgagcgccc ccagcttctc tgctggccgg aacctgcacc ccgaaccagg aagcacctgg
      121 cggcgggcgc gggatggctg ggcccagctg gggtctccct cggctggacg gtttcatcct
      181 taccgagcgc ctgggcagtg gcacgtacgc cacggtgtac aaggcctacg ccaagaagga
      241 tactcgggaa gtggtagcca taaaatgcgt ggccaagaag agtctcaaca aggcgtcagt
      301 ggaaaacctc ctgactgaga ttgagatcct caagggcatt cggcaccccc atatcgtgca
      361 gctgaaagac ttccagtggg acaatgacaa tatctacctc atcatggagt tctgtgcagg
      421 gggtgacctg tctcgcttca ttcatacccg caggatcctg cctgagaagg tggcccgtgt
      481 tttcatgcag cagttggcta gtgccctgca gttcctgcat gaacgaaaca tctctcactt
      541 ggatctgaaa ccgcagaaca tcctgctgag ctctttggag aagccccacc tgaaactggc
      601 agactttggc tttgcccagc acatgtcccc gtgggacgaa aaacacgtgc tccgtggctc
      661 cccgctctat atggctcctg agatggtgtg tcggcggcag tatgatgcgc gtgtggacct
      721 ctggtctgtg ggggtgatcc tgtacgaagc cctctttggg cagcccccct ttgcctccag
      781 atcgttctca gagctagaag aaaagattcg cagcaatcgg gtgattgagc tccctcttcg
      841 gccccaactc tccctagact gccgggacct gttgcagcga cttctagagc gggaccccgc
      901 ccgtcgaatc tccttcaagg acttctttgc ccatccctgg gtggacctgg agcacatgcc
      961 cagtggggag agcctggcac aggcaagggc ccttgtggtg gaggctgtga agaaggacca
     1021 ggagggggat gctgccgctg ccctgtcgct ctactgcaag gctctggact tctttgtacc
     1081 tgcgctacac tacgaagtgg atgcccagag gaaggaggca attaaggcga aggtgggaca
     1141 gtatgtgtcc cgggcagagg agctcaaagc cattgtctcc tcctccaatc aggccctgct
     1201 aagacagggc acaactgtcc aagagctgct tcgagagatg gcccgtgaca aaccacgcct
     1261 cctggctgcc ctggaagtgg cctcagctgc cctggccaag gaggaggaag ctggcaaaga
     1321 gcaggatgcc ctggacctgt accagcacag cctcggggag ctgctagtgc tgttggcagc
     1381 agaggcccca ggccgaaggc gggagctcct tcacaccgag gttcagaacc tcatggctcg
     1441 agctgaatac ctgaaggagc agatcaagat aagggagtct cactgggaag cggagagtct
     1501 ggacaaagag gggctgtcgg agtctgttcg tagttcttgc acactgcagt gacaccggaa
     1561 ggagcagcgg atggagcaca accctagaga gaagctgcat taccaactca ggttgacacc
     1621 tgcacacctg ggaccttcct ggacgagcag ctcccacatg ctggttccca gcattcctct
     1681 gagtgttctc cacccttggg gcgtctggtg gcaggtgtac taagctctgg gagaattact
     1741 tgaatgtgac cttgtcatta ggtgactgct ggtctaagcc tgtccggctt caggacacca
     1801 tcaccccgtt gtgttttgtt ctgcaaagag gacgtcatgc ctcttcagga cacttgctac
     1861 cagacagctg ctgtacctgg gccacccctc cctgggagcc tttattccaa ccctactttt
     1921 tttcttgcac tggaatggga cactcggata ccctcaggga ctacctacct gacagtatgc
     1981 tctcggctct cagacctctc cagtcttcct gcgagctcag agctgccatc cttttcagtt
     2041 ctttaagaca atccttcatg catgaaagtc atgccctttg taaaggtgga atacatgtga
     2101 gaaccccaga ccttccctgc cttggcatgg aggaggggtc ctcatacccc cacttacagc
     2161 tctctttgag gggatatgcc acactagtca catggtggac cctgagctag agctgggtct
     2221 tggctgggtc ttcccctctg tcctattaag ctatggatac atccacagct tataccctgt
     2281 atgagctgga gaagaactta cgtatctgga gttactggaa gattgctctt tttttttttc
     2341 ttctttaaac accccctccc ccaggtcatc atcttgtttc agatttttat tcaaattctt
     2401 attgaaggct gatttttgaa taaggagcag aggagctgtt ctgccacaaa tgacccccaa
     2461 atgacaggca ctgagacttt ctttcttcct tccttccttc cttccttcct tccttccttc
     2521 cttccttcct tccttccttc ctttctttct ttctttcttt ctttctttct ttctttcttt
     2581 ctttctttct ttctttcttt cttctttctt cctctgtgtg tgtgtggggt gtgtgtgtgt
     2641 gtgtgtgtgt gtgtgtgtgt gtgtgtgtga agggttattt ctaaagttag agaatactgg
     2701 tgattttcaa tcattctgcc cttaaccgcc tccttagggc aaaatggaac accctccttg
     2761 ctagaggctg gatgtatgta aagactatag ttcattgttt ctctattaaa ttattttcca
     2821 tactta
//
